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See other RNF223 CNV Assays ›
Gene Symbol
RNF223
Assay Reference Genome
Location

Chr.1:1070916 on build GRCh38
Cytoband
1p36.33
Assay ID Hs03364983_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 401934

Gene Name:

 ring finger protein 223

Gene Aliases:

 -

Location:

 Chr.1:1065635-1074307 on Build GRCh38

Assay Gene Location:

 Within Exon 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
RNF223 XM_017001286.1 2 1952 XP_016856775.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv945741 Chr.1:1007194 - 1092619 on Build GRCh38 Duplication ISG15 AGRN RNF223 LOC100288175 C1orf159 LOC105378948
nsv509146 Chr.1:1010510 - 1111188 on Build GRCh38 Insertion ISG15 AGRN RNF223 LOC100288175 C1orf159 LOC105378948
esv2762302 Chr.1:914637 - 1106320 on Build GRCh38 Gain AGRN RNF223 NOC2L LOC100130417 SAMD11 PLEKHN1 LOC284600 HES4 LOC100288175 C1orf159 PERM1 LOC107985728 ISG15 KLHL17 LOC105378948
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss LOC148413 PLEKHN1 LOC100133331 MIR200A FAAP20 FAM138A LOC100288175 LOC105378591 DVL1 KLHL17 WASH7P PUSL1 LINC01342 CDK11B ATAD3C LOC101928626 PRKCZ LOC100132287 MIR6727 SKI MXRA8 MIR1302-2 TMEM240 TAS1R3 NOC2L LOC100287934 MIR200B LOC100506504 FAM41C HES4 TNFRSF4 LOC729737 CPSF3L LINC01128 MIR6726 CDK11A VWA1 LOC105378589 CCNL2 MIB2 MTND1P23 MMP23A RNF223 OR4F5 ACAP3 MTND2P28 MRPL20 TMEM88B C1orf159 PERM1 SSU72 DDX11L1 TTLL10-AS1 OR4F16 LOC105378949 LOC100130417 TMEM52 NADK LOC107985729 GABRD LOC107985728 GNB1 SLC35E2B AURKAIP1 MORN1 UBE2J2 MIR6859-2 MIR429 SLC35E2 SDF4 OR4F29 MIR6723 LOC105378948 TNFRSF18 LOC284600 MIR6808 CALML6 B3GALT6 FAM87B ATAD3A LOC105378592 AGRN ATAD3B MIR6859-1 SCNN1D SAMD11 FAM132A LOC105378947 TTLL10 LOC107984841 LINC00115 FNDC10 MMP23B CFAP74 LOC100129534 CPTP LOC100134822 LOC102724312 ISG15 ANKRD65 LOC100288069 LOC102725121
nsv950451 Chr.1:899421 - 1094520 on Build GRCh38 Deletion AGRN RNF223 NOC2L LOC100130417 SAMD11 PLEKHN1 LOC284600 HES4 LOC100288175 C1orf159 PERM1 LOC107985728 ISG15 KLHL17 LOC105378948
nsv1003578 Chr.1:1068249 - 1282706 on Build GRCh38 Gain TNFRSF18 RNF223 SCNN1D MIR200B MIR200A TNFRSF4 C1orf159 FAM132A TTLL10 UBE2J2 B3GALT6 MIR429 TTLL10-AS1 LINC01342 SDF4 LOC105378948
nsv544947 Chr.1:1070426 - 1306704 on Build GRCh38 Loss TNFRSF18 RNF223 ACAP3 SCNN1D MIR200B MIR200A TNFRSF4 C1orf159 FAM132A TTLL10 UBE2J2 B3GALT6 MIR429 MIR6726 TTLL10-AS1 LINC01342 SDF4
nsv428334 Chr.1:874371 - 1220569 on Build GRCh38 Gain AGRN NOC2L LOC100130417 SAMD11 MIR200B PLEKHN1 MIR200A FAM41C HES4 LOC100288175 TNFRSF4 LOC107985728 TTLL10 KLHL17 MIR429 LINC01342 SDF4 LOC105378948 TNFRSF18 RNF223 LOC284600 C1orf159 PERM1 ISG15 TTLL10-AS1
nsv1160772 Chr.1:1027585 - 1333467 on Build GRCh38 Duplication AGRN TAS1R3 SCNN1D MIR200B MIR200A LOC100288175 TNFRSF4 FAM132A CPSF3L TTLL10 UBE2J2 MIR429 MIR6726 PUSL1 LINC01342 SDF4 CPTP LOC105378948 TNFRSF18 RNF223 ACAP3 MIR6727 C1orf159 B3GALT6 TTLL10-AS1
dgv5n100 Chr.1:585989 - 1114424 on Build GRCh38 Gain AGRN NOC2L LOC100130417 LOC100287934 SAMD11 PLEKHN1 LOC100133331 FAM41C HES4 LOC100288175 LOC105378947 LOC107985728 KLHL17 LINC01128 LOC107984841 LINC00115 MTND1P23 MIR6723 LOC105378948 RNF223 LOC101928626 MTND2P28 LOC284600 C1orf159 PERM1 ISG15 LOC100288069 FAM87B OR4F16
nsv10161 Chr.1:776731 - 1777210 on Build GRCh38 Gain+Loss LOC148413 LOC100130417 NADK PLEKHN1 MIR200A LOC100288175 LOC107985729 LOC107985728 SLC35E2B DVL1 AURKAIP1 UBE2J2 KLHL17 MIR429 SLC35E2 PUSL1 LINC01342 CDK11B SDF4 LOC105378948 TNFRSF18 ATAD3C LOC284600 MIR6727 MIR6808 B3GALT6 MXRA8 FAM87B ATAD3A TMEM240 AGRN TAS1R3 ATAD3B NOC2L SCNN1D LOC100287934 SAMD11 MIR200B FAM41C HES4 TNFRSF4 FAM132A CPSF3L TTLL10 LINC01128 LINC00115 FNDC10 MIR6726 MMP23B CDK11A VWA1 CCNL2 CPTP MIB2 MMP23A RNF223 ACAP3 MRPL20 TMEM88B LOC102724312 C1orf159 PERM1 SSU72 ISG15 ANKRD65 LOC100288069 TTLL10-AS1
nsv517709 Chr.1:817186 - 1275912 on Build GRCh38 Gain+Loss AGRN NOC2L LOC100130417 SAMD11 MIR200B PLEKHN1 MIR200A FAM41C HES4 LOC100288175 TNFRSF4 FAM132A LOC107985728 TTLL10 UBE2J2 KLHL17 LINC01128 MIR429 LINC00115 LINC01342 SDF4 LOC105378948 TNFRSF18 RNF223 LOC284600 C1orf159 PERM1 ISG15 B3GALT6 TTLL10-AS1 FAM87B
nsv1013524 Chr.1:939510 - 1161955 on Build GRCh38 Gain AGRN RNF223 NOC2L SAMD11 PLEKHN1 HES4 LOC100288175 C1orf159 PERM1 ISG15 KLHL17 LINC01342 LOC105378948
dgv2n67 Chr.1:877618 - 1426500 on Build GRCh38 Gain AGRN TAS1R3 NOC2L SCNN1D LOC148413 LOC100130417 SAMD11 MIR200B PLEKHN1 MIR200A HES4 LOC100288175 TNFRSF4 FAM132A LOC107985728 DVL1 CPSF3L AURKAIP1 TTLL10 UBE2J2 KLHL17 MIR429 MIR6726 PUSL1 LINC01342 CCNL2 SDF4 CPTP LOC105378948 TNFRSF18 RNF223 ACAP3 MRPL20 TMEM88B LOC284600 MIR6727 C1orf159 PERM1 MIR6808 ISG15 ANKRD65 B3GALT6 TTLL10-AS1 MXRA8
nsv1160644 Chr.1:939652 - 1220663 on Build GRCh38 Deletion TNFRSF18 AGRN RNF223 NOC2L SAMD11 MIR200B PLEKHN1 MIR200A HES4 LOC100288175 TNFRSF4 C1orf159 PERM1 ISG15 TTLL10 KLHL17 MIR429 TTLL10-AS1 LINC01342 SDF4 LOC105378948

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

Gene Ontology Categories:

Process(es)


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