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See other GJC2 CNV Assays ›
Gene Symbol
GJC2
Assay Reference Genome
Location

Chr.1:228150545 on build GRCh38
Cytoband
1q42.13
Assay ID Hs03365403_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 57165

Gene Name:

 gap junction protein gamma 2

Gene Aliases:

 CX46.6, Cx47, GJA12, HLD2, LMPH1C, PMLDAR, SPG44

Location:

 Chr.1:228149714-228159826 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
GJC2 NM_020435.3 NP_065168.2
BC035840.1 AAH35840.1
BC089439.1 AAH89439.1
CF132637.1
EU433401.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv952137 Chr.1:228140600 - 228182899 on Build GRCh38 Deletion IBA57 GJC2 GUK1 IBA57-AS1
nsv826908 Chr.1:227707685 - 228503399 on Build GRCh38 Gain HIST3H2BB LOC100506571 TRIM17 LOC101060022 MIR4666A C1orf145 C1orf35 ARF1 TRIM11 MIR6742 GUK1 RNF187 JMJD4 MRPL55 HIST3H2A LOC105373289 WNT9A WNT3A OBSCN IBA57 GJC2 MIR5008 SNAP47 LOC101927401 IBA57-AS1 LOC107985355 HIST3H3 PRSS38 MIR3620
nsv1160102 Chr.1:228081212 - 228239280 on Build GRCh38 Deletion C1orf35 OBSCN IBA57 ARF1 GJC2 MRPL55 GUK1 IBA57-AS1 MIR3620 C1orf145
esv32853 Chr.1:227692415 - 228670462 on Build GRCh38 Gain HIST3H2BB LOC100506571 TRIM17 MIR4666A LOC105373132 RNA5S15 GUK1 MRPL55 WNT9A WNT3A RNA5S7 RHOU RNA5S9 RNA5S12 IBA57-AS1 RNA5S16 RNA5S8 RNA5S13 LOC107985355 MIR3620 LOC101060022 RNA5S6 RNA5S3 RNA5S5 C1orf145 C1orf35 ARF1 RNA5S14 TRIM11 MIR6742 RNF187 JMJD4 RNA5S17 HIST3H2A LOC105373289 RNA5S1 OBSCN IBA57 BTNL10 GJC2 MIR5008 SNAP47 RNA5S2 LOC101927401 RNA5S4 RNA5S10 RNA5S11 HIST3H3 PRSS38 DUSP5P1
nsv827019 Chr.1:228126466 - 228463319 on Build GRCh38 Loss HIST3H2BB TRIM17 HIST3H2A MIR4666A C1orf145 OBSCN IBA57 GJC2 TRIM11 MIR6742 GUK1 LOC101927401 IBA57-AS1 HIST3H3
nsv523935 Chr.1:227850423 - 228494048 on Build GRCh38 Loss HIST3H2BB LOC100506571 TRIM17 LOC101060022 MIR4666A C1orf145 C1orf35 ARF1 TRIM11 MIR6742 GUK1 RNF187 MRPL55 HIST3H2A WNT9A WNT3A OBSCN IBA57 GJC2 MIR5008 LOC101927401 IBA57-AS1 LOC107985355 HIST3H3 MIR3620
dgv839n54 Chr.1:228139958 - 228183397 on Build GRCh38 Loss IBA57 GJC2 GUK1 IBA57-AS1
nsv549290 Chr.1:228145951 - 228162105 on Build GRCh38 Loss GJC2 GUK1

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

gap junction

Gene Ontology Categories:

Function(s) Process(es)


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