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See other TNFRSF4 CNV Assays ›
Gene Symbol
TNFRSF4
Assay Reference Genome
Location

Chr.1:1216341 on build GRCh38
Cytoband
1p36.33
Assay ID Hs03366043_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 7293

Gene Name:

 TNF receptor superfamily member 4

Gene Aliases:

 ACT35, CD134, IMD16, OX40, TXGP1L

Location:

 Chr.1:1211326-1216812 on Build GRCh38

Assay Gene Location:

 Within Exon 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TNFRSF4 XM_017002231.1 1 472 XP_016857720.1
XM_017002232.1 1 472 XP_016857721.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv428334 Chr.1:874371 - 1220569 on Build GRCh38 Gain NOC2L TTLL10-AS1 LOC284600 PLEKHN1 SAMD11 TNFRSF4 MIR200B TNFRSF18 PERM1 LOC105378948 LINC01342 TTLL10 MIR429 ISG15 C1orf159 MIR200A AGRN LOC107985728 FAM41C RNF223 LOC100130417 HES4 SDF4 LOC100288175 KLHL17
nsv1160772 Chr.1:1027585 - 1333467 on Build GRCh38 Duplication TTLL10-AS1 UBE2J2 B3GALT6 FAM132A TNFRSF4 MIR200B TNFRSF18 LOC105378948 LINC01342 TTLL10 MIR429 MIR6726 CPSF3L MIR6727 C1orf159 MIR200A AGRN CPTP SCNN1D RNF223 PUSL1 TAS1R3 SDF4 ACAP3 LOC100288175
nsv10161 Chr.1:776731 - 1777210 on Build GRCh38 Gain+Loss NOC2L ATAD3C LOC107985729 UBE2J2 LOC148413 MMP23A SAMD11 FAM132A TNFRSF4 MIR200B PERM1 LOC105378948 LINC01342 MIR429 DVL1 ISG15 MIR6726 CPSF3L TMEM88B MIR6727 SSU72 CCNL2 MMP23B CPTP LINC00115 LOC100130417 FAM87B MIB2 LOC100287934 TAS1R3 AURKAIP1 ACAP3 LOC100288069 CDK11A TTLL10-AS1 FNDC10 LOC102724312 MXRA8 LOC284600 B3GALT6 PLEKHN1 TNFRSF18 VWA1 CDK11B TMEM240 TTLL10 LINC01128 MIR6808 SLC35E2 C1orf159 MIR200A AGRN LOC107985728 SLC35E2B MRPL20 FAM41C ANKRD65 SCNN1D RNF223 ATAD3A HES4 ATAD3B PUSL1 SDF4 LOC100288175 NADK KLHL17
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss NOC2L LOC102725121 LOC105378947 UBE2J2 MMP23A FAM132A TNFRSF4 LOC100129534 LOC100134822 LOC105378948 LINC01342 MIR429 DVL1 LOC100132287 MIR6726 MIR6727 GABRD CFAP74 OR4F29 SKI SSU72 LOC105378592 CPTP LINC00115 LOC100130417 FAM87B LOC100287934 AURKAIP1 MIR6723 PRKCZ TTLL10-AS1 FNDC10 LOC284600 B3GALT6 TNFRSF18 CDK11B TMEM240 TTLL10 MIR6808 C1orf159 MIR200A LOC107985728 ANKRD65 HES4 ATAD3B PUSL1 LOC100288175 OR4F16 KLHL17 LOC105378589 LOC105378591 LOC105378949 DDX11L1 LOC107984841 ATAD3C LOC107985729 LOC148413 SAMD11 MIR200B LOC100133331 PERM1 ISG15 CPSF3L TMEM88B GNB1 CALML6 LOC101928626 CCNL2 MMP23B MORN1 TMEM52 FAAP20 MIR1302-2 MIB2 TAS1R3 ACAP3 LOC100288069 LOC729737 CDK11A LOC102724312 MXRA8 OR4F5 PLEKHN1 VWA1 WASH7P LINC01128 SLC35E2 AGRN MIR6859-2 MIR6859-1 SLC35E2B MRPL20 FAM41C LOC100506504 SCNN1D RNF223 ATAD3A FAM138A SDF4 MTND1P23 NADK MTND2P28
nsv517709 Chr.1:817186 - 1275912 on Build GRCh38 Gain+Loss NOC2L TTLL10-AS1 UBE2J2 LOC284600 B3GALT6 PLEKHN1 SAMD11 FAM132A TNFRSF4 MIR200B TNFRSF18 PERM1 LOC105378948 LINC01342 TTLL10 LINC01128 MIR429 ISG15 C1orf159 MIR200A AGRN LOC107985728 FAM41C LINC00115 RNF223 LOC100130417 FAM87B HES4 SDF4 LOC100288175 KLHL17
nsv950452 Chr.1:1106921 - 1637538 on Build GRCh38 Deletion ATAD3C TTLL10-AS1 LOC107985729 FNDC10 LOC102724312 UBE2J2 LOC148413 MXRA8 B3GALT6 FAM132A TNFRSF4 MIR200B TNFRSF18 VWA1 CDK11B LINC01342 TMEM240 TTLL10 MIR429 MIR6808 DVL1 MIR6726 CPSF3L TMEM88B MIR6727 C1orf159 MIR200A SSU72 CCNL2 MMP23B CPTP MRPL20 ANKRD65 SCNN1D ATAD3A ATAD3B PUSL1 MIB2 TAS1R3 SDF4 AURKAIP1 ACAP3
dgv2n67 Chr.1:877618 - 1426500 on Build GRCh38 Gain NOC2L TTLL10-AS1 UBE2J2 LOC148413 MXRA8 LOC284600 B3GALT6 PLEKHN1 SAMD11 FAM132A TNFRSF4 MIR200B TNFRSF18 PERM1 LOC105378948 LINC01342 TTLL10 MIR429 MIR6808 DVL1 ISG15 MIR6726 CPSF3L TMEM88B MIR6727 C1orf159 MIR200A AGRN LOC107985728 CCNL2 CPTP MRPL20 ANKRD65 SCNN1D RNF223 LOC100130417 HES4 PUSL1 TAS1R3 SDF4 AURKAIP1 ACAP3 LOC100288175 KLHL17
nsv1160644 Chr.1:939652 - 1220663 on Build GRCh38 Deletion NOC2L C1orf159 MIR200A TTLL10-AS1 AGRN RNF223 PLEKHN1 SAMD11 TNFRSF4 HES4 MIR200B TNFRSF18 SDF4 PERM1 LOC100288175 LOC105378948 LINC01342 KLHL17 TTLL10 MIR429 ISG15
nsv1003578 Chr.1:1068249 - 1282706 on Build GRCh38 Gain C1orf159 MIR200A TTLL10-AS1 UBE2J2 B3GALT6 SCNN1D RNF223 FAM132A TNFRSF4 MIR200B TNFRSF18 SDF4 LOC105378948 LINC01342 TTLL10 MIR429
nsv544947 Chr.1:1070426 - 1306704 on Build GRCh38 Loss C1orf159 MIR200A TTLL10-AS1 UBE2J2 B3GALT6 SCNN1D RNF223 FAM132A TNFRSF4 MIR200B TNFRSF18 SDF4 ACAP3 LINC01342 TTLL10 MIR429 MIR6726
nsv469848 Chr.1:1146082 - 1322235 on Build GRCh38 Gain CPSF3L MIR6727 MIR200A TTLL10-AS1 UBE2J2 B3GALT6 SCNN1D FAM132A TNFRSF4 MIR200B PUSL1 TNFRSF18 SDF4 ACAP3 TTLL10 MIR429 MIR6726
nsv544956 Chr.1:1171093 - 1241217 on Build GRCh38 Loss TNFRSF4 TTLL10-AS1 TNFRSF18 SDF4 TTLL10 B3GALT6

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