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See other SSU72 CNV Assays ›
Gene Symbol
SSU72
Assay Reference Genome
Location

Chr.1:1561477 on build GRCh38
Cytoband
1p36.33
Assay ID Hs03366752_cn
Size
Availability Made To Order
Catalog # 4400291
Price 457.00
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Assay Details

Target Gene Details

Entrez Gene ID:

 29101

Gene Name:

 SSU72 homolog, RNA polymerase II CTD phosphatase

Gene Aliases:

 HSPC182, PNAS-120

Location:

 Chr.1:1541673-1574882 on Build GRCh38

Assay Gene Location:

 Within Intron 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SSU72 NM_014188.2 NP_054907.1
AF161530.1 AAF29145.1
AF277178.1 AAK07538.1
AJ276409.1 CAC81713.1
AK001809.1 BAA91921.1
AK129493.1 1 590
AK297505.1
AK310067.1
BC008070.2 AAH08070.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv545000 Chr.1:1421170 - 1573654 on Build GRCh38 Loss ANKRD65 LOC102724312 ATAD3C ATAD3B ATAD3A TMEM240 TMEM88B SSU72 LOC107985729 VWA1
nsv10161 Chr.1:776731 - 1777210 on Build GRCh38 Gain+Loss ANKRD65 LOC102724312 TMEM240 MMP23A MIR200A LOC100288069 CDK11A NOC2L FAM41C FAM132A CDK11B TMEM88B SCNN1D MIR200B LOC148413 MIR429 TAS1R3 LINC01342 SAMD11 ATAD3A MRPL20 LOC100287934 MIR6727 MIR6726 TTLL10-AS1 LOC100288175 VWA1 HES4 FNDC10 NADK CPSF3L ATAD3C MMP23B MIB2 SLC35E2 AGRN PUSL1 KLHL17 LOC284600 CPTP LOC100130417 LINC00115 TNFRSF4 CCNL2 PERM1 ATAD3B RNF223 MIR6808 UBE2J2 LOC107985728 AURKAIP1 FAM87B LINC01128 B3GALT6 ISG15 TNFRSF18 PLEKHN1 SDF4 C1orf159 SLC35E2B SSU72 LOC107985729 LOC105378948 ACAP3 DVL1 TTLL10 MXRA8
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss LOC102724312 WASH7P TMEM240 MMP23A LOC105378589 FAM132A LOC100134822 FAAP20 SCNN1D MIR200B LOC148413 MIR429 LINC01342 GNB1 ATAD3A LOC100287934 MIR6859-1 LOC100133331 LOC100288175 VWA1 LOC100132287 FNDC10 NADK MIB2 LOC107984841 SLC35E2 DDX11L1 LOC100130417 LOC105378949 LOC102725121 TMEM52 SKI OR4F29 LOC729737 FAM138A ATAD3B UBE2J2 AURKAIP1 FAM87B LINC01128 CALML6 PLEKHN1 SDF4 C1orf159 LOC105378591 OR4F16 SSU72 MORN1 LOC107985729 LOC105378948 ACAP3 DVL1 TTLL10 GABRD ANKRD65 MIR200A LOC100288069 CDK11A NOC2L FAM41C PRKCZ MTND1P23 CDK11B TMEM88B MTND2P28 CFAP74 TAS1R3 LOC100506504 SAMD11 MRPL20 MIR6727 MIR6726 LOC105378592 TTLL10-AS1 OR4F5 HES4 CPSF3L ATAD3C MMP23B LOC100129534 AGRN PUSL1 KLHL17 LOC284600 MIR1302-2 CPTP LOC101928626 LINC00115 TNFRSF4 CCNL2 PERM1 RNF223 MIR6808 LOC107985728 MIR6859-2 B3GALT6 ISG15 TNFRSF18 SLC35E2B MIR6723 LOC105378947 MXRA8
nsv950452 Chr.1:1106921 - 1637538 on Build GRCh38 Deletion ANKRD65 LOC102724312 PUSL1 CPTP TMEM240 MIR200A FAM132A CDK11B TMEM88B TNFRSF4 SCNN1D MIR200B LOC148413 MIR429 TAS1R3 LINC01342 CCNL2 ATAD3B MIR6808 ATAD3A UBE2J2 MRPL20 AURKAIP1 MIR6727 MIR6726 TTLL10-AS1 B3GALT6 VWA1 TNFRSF18 SDF4 FNDC10 CPSF3L ATAD3C C1orf159 MMP23B SSU72 LOC107985729 MIB2 ACAP3 DVL1 TTLL10 MXRA8
nsv1011818 Chr.1:1394332 - 1575421 on Build GRCh38 Gain CCNL2 ANKRD65 LOC102724312 ATAD3B ATAD3A TMEM240 MRPL20 VWA1 ATAD3C TMEM88B SSU72 LOC107985729 LOC148413
esv2758913 Chr.1:1389149 - 2092899 on Build GRCh38 Gain+Loss ANKRD65 LOC102724312 TMEM240 MMP23A CDK11A LOC105378589 LOC105378949 PRKCZ TMEM52 CDK11B TMEM88B LOC148413 CFAP74 GNB1 CCNL2 ATAD3B ATAD3A MRPL20 CALML6 VWA1 FNDC10 NADK ATAD3C SLC35E2B MMP23B LOC105378591 SSU72 LOC107985729 MIB2 SLC35E2 GABRD

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

protein phosphatase

Gene Ontology Categories:

Function(s) Process(es)


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