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See other TNFRSF4 CNV Assays ›
Gene Symbol
TNFRSF4
Assay Reference Genome
Location

Chr.1:1215287 on build GRCh38
Cytoband
1p36.33
Assay ID Hs03368805_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 7293

Gene Name:

 TNF receptor superfamily member 4

Gene Aliases:

 ACT35, CD134, IMD16, OX40, TXGP1L

Location:

 Chr.1:1211326-1216812 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TNFRSF4 XM_017002231.1 XP_016857720.1
XM_017002232.1 XP_016857721.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv428334 Chr.1:874371 - 1220569 on Build GRCh38 Gain KLHL17 LOC284600 MIR200B TNFRSF18 RNF223 PERM1 LINC01342 TNFRSF4 C1orf159 LOC100130417 ISG15 SAMD11 SDF4 TTLL10 NOC2L PLEKHN1 HES4 TTLL10-AS1 LOC100288175 MIR429 FAM41C MIR200A LOC105378948 AGRN LOC107985728
nsv1160772 Chr.1:1027585 - 1333467 on Build GRCh38 Duplication TAS1R3 MIR6727 MIR200B TNFRSF18 RNF223 LINC01342 TNFRSF4 CPSF3L C1orf159 MIR6726 UBE2J2 SDF4 TTLL10 SCNN1D FAM132A CPTP ACAP3 TTLL10-AS1 B3GALT6 LOC100288175 MIR429 MIR200A PUSL1 LOC105378948 AGRN
nsv10161 Chr.1:776731 - 1777210 on Build GRCh38 Gain+Loss TAS1R3 KLHL17 TMEM240 VWA1 LOC284600 MIR6808 MIR200B TNFRSF18 MIB2 PERM1 SSU72 TNFRSF4 CPSF3L C1orf159 MXRA8 MIR6726 UBE2J2 MMP23A LOC100287934 TTLL10 SCNN1D MRPL20 LINC01128 CPTP PLEKHN1 B3GALT6 MIR429 AGRN LOC148413 LOC107985728 TMEM88B MIR6727 ATAD3B RNF223 AURKAIP1 CDK11A LINC01342 CDK11B CCNL2 FNDC10 LOC100130417 ISG15 SAMD11 SLC35E2B SDF4 ATAD3A DVL1 NADK NOC2L FAM132A MMP23B ANKRD65 LOC102724312 FAM87B ATAD3C LOC107985729 HES4 ACAP3 LOC100288069 TTLL10-AS1 LOC100288175 FAM41C MIR200A PUSL1 LOC105378948 SLC35E2 LINC00115
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss KLHL17 TMEM240 LOC284600 OR4F5 MIR6808 MIR200B TNFRSF18 LOC105378591 PERM1 TNFRSF4 SKI PRKCZ FAAP20 OR4F16 SCNN1D MRPL20 LINC01128 LOC102725121 CPTP PLEKHN1 MIR429 MIR6723 MORN1 LOC148413 LOC105378592 LOC107985728 TMEM88B ATAD3B TMEM52 MTND2P28 CDK11A LINC01342 GNB1 CDK11B LOC100130417 ISG15 SDF4 LOC100132287 NADK NOC2L MMP23B ANKRD65 ATAD3C MTND1P23 LOC107985729 HES4 LOC101928626 LOC100288175 MIR200A LOC105378948 LOC100129534 TAS1R3 FAM138A VWA1 LOC729737 LOC100506504 GABRD MIB2 SSU72 CPSF3L C1orf159 MXRA8 MIR6726 UBE2J2 MMP23A LOC100287934 TTLL10 LOC105378947 MIR1302-2 WASH7P B3GALT6 AGRN OR4F29 MIR6727 CALML6 LOC105378589 RNF223 AURKAIP1 CCNL2 FNDC10 SAMD11 SLC35E2B ATAD3A DVL1 FAM132A DDX11L1 MIR6859-2 LOC102724312 FAM87B ACAP3 LOC100134822 LOC100288069 TTLL10-AS1 LOC105378949 FAM41C PUSL1 MIR6859-1 SLC35E2 LINC00115 LOC100133331 LOC107984841 CFAP74
nsv517709 Chr.1:817186 - 1275912 on Build GRCh38 Gain+Loss KLHL17 LOC284600 MIR200B TNFRSF18 RNF223 PERM1 LINC01342 TNFRSF4 C1orf159 LOC100130417 ISG15 SAMD11 UBE2J2 SDF4 TTLL10 NOC2L FAM132A LINC01128 FAM87B PLEKHN1 HES4 TTLL10-AS1 B3GALT6 LOC100288175 MIR429 FAM41C MIR200A LOC105378948 LINC00115 AGRN LOC107985728
nsv950452 Chr.1:1106921 - 1637538 on Build GRCh38 Deletion TAS1R3 TMEM240 TMEM88B VWA1 MIR6727 MIR6808 MIR200B ATAD3B TNFRSF18 MIB2 AURKAIP1 SSU72 LINC01342 TNFRSF4 CDK11B CPSF3L C1orf159 CCNL2 FNDC10 MXRA8 MIR6726 UBE2J2 SDF4 ATAD3A DVL1 TTLL10 SCNN1D FAM132A MRPL20 MMP23B ANKRD65 LOC102724312 ATAD3C LOC107985729 CPTP ACAP3 TTLL10-AS1 B3GALT6 MIR429 MIR200A PUSL1 LOC148413
dgv2n67 Chr.1:877618 - 1426500 on Build GRCh38 Gain TAS1R3 KLHL17 TMEM88B MIR6727 LOC284600 MIR6808 MIR200B TNFRSF18 RNF223 AURKAIP1 PERM1 LINC01342 TNFRSF4 CPSF3L C1orf159 CCNL2 LOC100130417 ISG15 MXRA8 SAMD11 MIR6726 UBE2J2 SDF4 DVL1 TTLL10 NOC2L SCNN1D FAM132A MRPL20 ANKRD65 CPTP PLEKHN1 HES4 ACAP3 TTLL10-AS1 B3GALT6 LOC100288175 MIR429 MIR200A PUSL1 LOC105378948 AGRN LOC148413 LOC107985728
nsv1160644 Chr.1:939652 - 1220663 on Build GRCh38 Deletion TTLL10 KLHL17 NOC2L MIR200B TNFRSF18 RNF223 PLEKHN1 HES4 TTLL10-AS1 PERM1 LOC100288175 LINC01342 MIR429 TNFRSF4 C1orf159 MIR200A ISG15 LOC105378948 AGRN SAMD11 SDF4
nsv1003578 Chr.1:1068249 - 1282706 on Build GRCh38 Gain TTLL10 SCNN1D FAM132A MIR200B TNFRSF18 RNF223 TTLL10-AS1 B3GALT6 LINC01342 MIR429 TNFRSF4 C1orf159 MIR200A LOC105378948 UBE2J2 SDF4
nsv544947 Chr.1:1070426 - 1306704 on Build GRCh38 Loss TTLL10 SCNN1D FAM132A MIR200B TNFRSF18 RNF223 ACAP3 TTLL10-AS1 B3GALT6 LINC01342 MIR429 TNFRSF4 C1orf159 MIR200A MIR6726 UBE2J2 SDF4
nsv544956 Chr.1:1171093 - 1241217 on Build GRCh38 Loss B3GALT6 TTLL10 TNFRSF4 TNFRSF18 SDF4 TTLL10-AS1
nsv469848 Chr.1:1146082 - 1322235 on Build GRCh38 Gain TTLL10 SCNN1D FAM132A MIR6727 MIR200B TNFRSF18 ACAP3 TTLL10-AS1 B3GALT6 MIR429 TNFRSF4 CPSF3L MIR200A PUSL1 MIR6726 UBE2J2 SDF4

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