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See other SLC35E2B CNV Assays ›
Gene Symbol
SLC35E2B
Assay Reference Genome
Location

Chr.1:1680423 on build GRCh38
Cytoband
1p36.33
Assay ID Hs03374176_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 728661

Gene Name:

 solute carrier family 35 member E2B

Gene Aliases:

 SLC35E2

Location:

 Chr.1:1661478-1692804 on Build GRCh38

Assay Gene Location:

 Within Intron 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SLC35E2B NM_001110781.2 NP_001104251.1
NM_001290264.1 NP_001277193.1
XM_011542072.1 XP_011540374.1
AB007916.3
AK125619.1
AK307886.1
BC110653.1 AAI10654.1
BG328537.1
CR936618.1 CAI56761.1
DA794179.1
DB450858.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv37n54 Chr.1:1663759 - 1696548 on Build GRCh38 Loss SLC35E2B
esv3585012 Chr.1:1677771 - 1684388 on Build GRCh38 Gain SLC35E2B
dgv5n111 Chr.1:1575421 - 1823403 on Build GRCh38 Deletion SLC35E2 GNB1 NADK CDK11A MMP23B MMP23A CDK11B MIB2 FNDC10 SLC35E2B
dgv8n100 Chr.1:1569349 - 1741152 on Build GRCh38 Loss SLC35E2 CDK11A MMP23B MMP23A CDK11B MIB2 SSU72 FNDC10 SLC35E2B
esv3575582 Chr.1:1624086 - 1721336 on Build GRCh38 Gain CDK11A MMP23B MMP23A CDK11B MIB2 SLC35E2B
esv3585010 Chr.1:1670280 - 1751138 on Build GRCh38 Loss SLC35E2 CDK11A MMP23A SLC35E2B
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss CALML6 LINC01342 KLHL17 MIR6723 ISG15 LOC105378948 SKI PRKCZ MIR429 MIR6726 MIR200B OR4F29 PUSL1 SLC35E2B AGRN LOC100288175 MTND1P23 OR4F16 LOC100130417 MIR6859-1 LOC105378591 FAM138A UBE2J2 CFAP74 LOC148413 TNFRSF4 MRPL20 OR4F5 MMP23B ATAD3B NOC2L AURKAIP1 MXRA8 MIR6808 GABRD MORN1 SCNN1D SSU72 MIR6859-2 FAM87B RNF223 GNB1 LOC107984841 CDK11B CPTP LOC100133331 DVL1 NADK CDK11A TTLL10-AS1 TNFRSF18 LOC105378947 SLC35E2 LOC729737 TMEM240 WASH7P LOC100287934 LOC102724312 FAAP20 MIR200A TTLL10 SAMD11 MIR6727 ANKRD65 HES4 LINC00115 FAM132A LOC105378949 TMEM52 FNDC10 MTND2P28 LOC107985728 ATAD3A PERM1 ATAD3C LOC105378589 ACAP3 MIR1302-2 CPSF3L LOC100288069 DDX11L1 LOC107985729 FAM41C LOC102725121 LINC01128 LOC100506504 SDF4 MMP23A LOC101928626 TMEM88B PLEKHN1 VWA1 LOC100132287 CCNL2 C1orf159 LOC100129534 MIB2 LOC100134822 LOC284600 TAS1R3 LOC105378592 B3GALT6
nsv1160797 Chr.1:1566216 - 1805918 on Build GRCh38 Duplication SLC35E2 GNB1 NADK CDK11A MMP23B MMP23A CDK11B MIB2 SSU72 FNDC10 SLC35E2B
dgv2e199 Chr.1:1653096 - 1721890 on Build GRCh38 Deletion CDK11A MMP23A CDK11B SLC35E2B
esv2760410 Chr.1:1565561 - 1756248 on Build GRCh38 Gain+Loss SLC35E2 NADK CDK11A MMP23B MMP23A CDK11B MIB2 SSU72 FNDC10 SLC35E2B
esv3585008 Chr.1:1663929 - 1681002 on Build GRCh38 Loss SLC35E2B
esv3585007 Chr.1:1647187 - 1714507 on Build GRCh38 Loss CDK11A MMP23A CDK11B SLC35E2B
nsv950516 Chr.1:1663141 - 1715961 on Build GRCh38 Deletion CDK11A MMP23A SLC35E2B
esv27786 Chr.1:1632502 - 1752267 on Build GRCh38 Gain SLC35E2 NADK CDK11A MMP23B MMP23A CDK11B SLC35E2B
nsv545022 Chr.1:1665581 - 1683909 on Build GRCh38 Loss SLC35E2B
nsv10161 Chr.1:776731 - 1777210 on Build GRCh38 Gain+Loss DVL1 LINC01342 NADK CDK11A KLHL17 TTLL10-AS1 TNFRSF18 ISG15 LOC105378948 MIR429 SLC35E2 TMEM240 LOC100287934 MIR6726 LOC102724312 MIR200B MIR200A PUSL1 TTLL10 SAMD11 SLC35E2B MIR6727 ANKRD65 HES4 LINC00115 FAM132A FNDC10 AGRN LOC100288175 LOC107985728 ATAD3A PERM1 ATAD3C ACAP3 LOC100130417 CPSF3L LOC100288069 LOC107985729 FAM41C UBE2J2 LINC01128 LOC148413 SDF4 MMP23A TNFRSF4 MRPL20 TMEM88B MMP23B ATAD3B PLEKHN1 NOC2L AURKAIP1 VWA1 MXRA8 MIR6808 CCNL2 C1orf159 SCNN1D MIB2 SSU72 LOC284600 FAM87B RNF223 TAS1R3 CDK11B B3GALT6 CPTP
nsv545026 Chr.1:1671348 - 1706566 on Build GRCh38 Loss CDK11A MMP23A SLC35E2B
nsv545018 Chr.1:1638499 - 1688102 on Build GRCh38 Loss CDK11B SLC35E2B
dgv3n67 Chr.1:1653920 - 1735718 on Build GRCh38 Gain SLC35E2 CDK11A MMP23A CDK11B SLC35E2B
esv2758913 Chr.1:1389149 - 2092899 on Build GRCh38 Gain+Loss LOC107985729 CALML6 CFAP74 NADK LOC148413 CDK11A MMP23A PRKCZ SLC35E2 MRPL20 TMEM240 TMEM88B MMP23B ATAD3B LOC102724312 VWA1 SLC35E2B ANKRD65 CCNL2 LOC105378949 GABRD TMEM52 MIB2 SSU72 FNDC10 GNB1 ATAD3A ATAD3C LOC105378589 CDK11B LOC105378591

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

secondary carrier transporter

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