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See other LOC101927401 CNV Assays ›
Gene Symbol
LOC101927401
Assay Reference Genome
Location

Chr.1:228362048 on build GRCh38
Cytoband
1q42.13
Assay ID Hs03375053_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 101927401

Gene Name:

 MAGE-like protein 2

Gene Aliases:

 -

Location:

 Chr.1:228360893-228369935 on Build GRCh38

Assay Gene Location:

 Within Intron 7
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LOC101927401 XM_011544350.2 XP_011542652.1
XM_011544351.2 XP_011542653.1
XM_011544352.2 XP_011542654.1
XM_017003091.1 XP_016858580.1
XM_017003092.1 XP_016858581.1

Target Gene Details

Entrez Gene ID:

 84033

Gene Name:

 obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF

Gene Aliases:

 ARHGEF30, UNC89

Location:

 Chr.1:228208013-228381431 on Build GRCh38

Assay Gene Location:

 Within Intron 94
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
OBSCN NM_001098623.2 NP_001092093.2
NM_001271223.2 NP_001258152.2
XM_005273287.4 XP_005273344.1
XM_005273291.4 XP_005273348.1
XM_005273298.4 XP_005273355.1
XM_005273307.4 XP_005273364.1
XM_006711822.3 XP_006711885.1
XM_006711823.3 XP_006711886.1
XM_011544297.2 XP_011542599.1
XM_011544299.2 XP_011542601.1
XM_017002443.1 XP_016857932.1
XM_017002444.1 XP_016857933.1
XM_017002445.1 XP_016857934.1
XM_017002446.1 XP_016857935.1
XM_017002447.1 XP_016857936.1
XM_017002448.1 XP_016857937.1
XM_017002449.1 XP_016857938.1
XM_017002450.1 XP_016857939.1
XM_017002451.1 XP_016857940.1
XM_017002452.1 XP_016857941.1
XM_017002453.1 XP_016857942.1
XM_017002454.1 XP_016857943.1
XM_017002455.1 XP_016857944.1
XM_017002456.1 XP_016857945.1
XM_017002457.1 XP_016857946.1
XM_017002458.1 XP_016857947.1
XM_017002459.1 XP_016857948.1
XM_017002460.1 XP_016857949.1
XM_017002461.1 XP_016857950.1
XM_017002462.1 XP_016857951.1
XM_017002463.1 XP_016857952.1
XM_017002464.1 XP_016857953.1
XM_017002465.1 XP_016857954.1
XM_017002466.1 XP_016857955.1
XM_017002467.1 XP_016857956.1
XM_017002468.1 XP_016857957.1
XM_017002469.1 XP_016857958.1
XM_017002470.1 XP_016857959.1
XM_017002473.1 XP_016857962.1
AB046776.1 BAB13382.1
AB046859.2 BAB13465.2
AM231061.1 CAJ76912.1
DQ400343.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv826908 Chr.1:227707685 - 228503399 on Build GRCh38 Gain RNF187 TRIM11 LOC100506571 OBSCN HIST3H3 TRIM17 ARF1 MIR5008 MIR6742 JMJD4 GUK1 PRSS38 HIST3H2BB IBA57-AS1 IBA57 MRPL55 LOC101927401 GJC2 MIR3620 HIST3H2A WNT9A C1orf35 LOC105373289 LOC101060022 MIR4666A WNT3A LOC107985355 SNAP47 C1orf145
nsv1013500 Chr.1:228271433 - 228713854 on Build GRCh38 Gain RNF187 BTNL10 LOC105373132 TRIM11 OBSCN RNA5S14 RNA5S4 HIST3H3 TRIM17 MIR6742 RNA5S13 HIST3H2BB RNA5S5 DUSP5P1 RNA5S12 RNA5S16 LOC101927401 RNA5S3 RNA5S15 HIST3H2A RNA5S6 RNA5S1 RNA5S11 MIR4666A RNA5S17 RNA5S9 RNA5S2 RNA5S10 RHOU RNA5S7 RNA5S8
nsv517545 Chr.1:228268446 - 228498298 on Build GRCh38 Loss RNF187 OBSCN MIR4666A HIST3H3 TRIM17 MIR6742 LOC101927401 HIST3H2BB TRIM11 HIST3H2A
esv32853 Chr.1:227692415 - 228670462 on Build GRCh38 Gain LOC105373132 TRIM11 OBSCN RNA5S4 TRIM17 ARF1 JMJD4 IBA57-AS1 IBA57 MRPL55 LOC101927401 GJC2 MIR3620 HIST3H2A RNA5S6 RNA5S1 LOC101060022 MIR4666A RNA5S9 RNA5S2 RNA5S10 SNAP47 RNA5S8 RNF187 BTNL10 LOC100506571 RNA5S14 HIST3H3 MIR5008 MIR6742 GUK1 PRSS38 RNA5S13 HIST3H2BB RNA5S5 DUSP5P1 RNA5S12 RNA5S16 RNA5S3 RNA5S15 WNT9A C1orf35 LOC105373289 RNA5S11 RNA5S17 WNT3A LOC107985355 RHOU RNA5S7 C1orf145
nsv827019 Chr.1:228126466 - 228463319 on Build GRCh38 Loss IBA57 LOC101927401 GJC2 TRIM11 HIST3H2A OBSCN MIR4666A HIST3H3 TRIM17 MIR6742 GUK1 HIST3H2BB C1orf145 IBA57-AS1
nsv549295 Chr.1:228276547 - 228413937 on Build GRCh38 Loss OBSCN TRIM17 MIR6742 LOC101927401 TRIM11
nsv523935 Chr.1:227850423 - 228494048 on Build GRCh38 Loss RNF187 TRIM11 LOC100506571 OBSCN HIST3H3 TRIM17 ARF1 MIR5008 MIR6742 GUK1 HIST3H2BB IBA57-AS1 IBA57 MRPL55 LOC101927401 GJC2 MIR3620 HIST3H2A WNT9A C1orf35 LOC101060022 MIR4666A WNT3A LOC107985355 C1orf145
nsv508697 Chr.1:228352336 - 228434913 on Build GRCh38 Deletion OBSCN HIST3H3 TRIM17 MIR6742 LOC101927401 TRIM11
nsv952140 Chr.1:228331100 - 228380999 on Build GRCh38 Deletion OBSCN LOC101927401

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