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See other LOC101927401 CNV Assays ›
Gene Symbol
LOC101927401
Assay Reference Genome
Location

Chr.1:228362048 on build GRCh38
Cytoband
1q42.13
Assay ID Hs03375053_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 101927401

Gene Name:

 MAGE-like protein 2

Gene Aliases:

 -

Location:

 Chr.1:228360893-228369935 on Build GRCh38

Assay Gene Location:

 Within Intron 7
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LOC101927401 XM_011544350.2 XP_011542652.1
XM_011544351.2 XP_011542653.1
XM_011544352.2 XP_011542654.1
XM_017003091.1 XP_016858580.1
XM_017003092.1 XP_016858581.1

Target Gene Details

Entrez Gene ID:

 84033

Gene Name:

 obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF

Gene Aliases:

 ARHGEF30, UNC89

Location:

 Chr.1:228208013-228381431 on Build GRCh38

Assay Gene Location:

 Within Intron 94
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
OBSCN NM_001098623.2 NP_001092093.2
NM_001271223.2 NP_001258152.2
XM_005273287.4 XP_005273344.1
XM_005273291.4 XP_005273348.1
XM_005273298.4 XP_005273355.1
XM_005273307.4 XP_005273364.1
XM_006711822.3 XP_006711885.1
XM_006711823.3 XP_006711886.1
XM_011544297.2 XP_011542599.1
XM_011544299.2 XP_011542601.1
XM_017002443.1 XP_016857932.1
XM_017002444.1 XP_016857933.1
XM_017002445.1 XP_016857934.1
XM_017002446.1 XP_016857935.1
XM_017002447.1 XP_016857936.1
XM_017002448.1 XP_016857937.1
XM_017002449.1 XP_016857938.1
XM_017002450.1 XP_016857939.1
XM_017002451.1 XP_016857940.1
XM_017002452.1 XP_016857941.1
XM_017002453.1 XP_016857942.1
XM_017002454.1 XP_016857943.1
XM_017002455.1 XP_016857944.1
XM_017002456.1 XP_016857945.1
XM_017002457.1 XP_016857946.1
XM_017002458.1 XP_016857947.1
XM_017002459.1 XP_016857948.1
XM_017002460.1 XP_016857949.1
XM_017002461.1 XP_016857950.1
XM_017002462.1 XP_016857951.1
XM_017002463.1 XP_016857952.1
XM_017002464.1 XP_016857953.1
XM_017002465.1 XP_016857954.1
XM_017002466.1 XP_016857955.1
XM_017002467.1 XP_016857956.1
XM_017002468.1 XP_016857957.1
XM_017002469.1 XP_016857958.1
XM_017002470.1 XP_016857959.1
XM_017002473.1 XP_016857962.1
AB046776.1 BAB13382.1
AB046859.2 BAB13465.2
AM231061.1 CAJ76912.1
DQ400343.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv826908 Chr.1:227707685 - 228503399 on Build GRCh38 Gain HIST3H3 JMJD4 LOC107985355 OBSCN MRPL55 RNF187 WNT9A IBA57 IBA57-AS1 LOC100506571 MIR4666A SNAP47 GUK1 C1orf35 HIST3H2A LOC101927401 TRIM17 PRSS38 LOC105373289 MIR3620 LOC101060022 ARF1 GJC2 WNT3A C1orf145 MIR5008 HIST3H2BB TRIM11 MIR6742
esv32853 Chr.1:227692415 - 228670462 on Build GRCh38 Gain JMJD4 OBSCN RNA5S10 RNA5S15 RHOU RNF187 RNA5S12 WNT9A IBA57 RNA5S7 LOC100506571 SNAP47 RNA5S3 GUK1 HIST3H2A LOC101927401 TRIM17 PRSS38 LOC105373132 MIR3620 RNA5S9 RNA5S17 ARF1 GJC2 RNA5S16 WNT3A RNA5S11 RNA5S2 HIST3H2BB MIR6742 HIST3H3 LOC107985355 BTNL10 MRPL55 RNA5S14 IBA57-AS1 RNA5S8 MIR4666A RNA5S4 C1orf35 LOC105373289 RNA5S1 RNA5S5 RNA5S6 LOC101060022 C1orf145 MIR5008 RNA5S13 TRIM11 DUSP5P1
nsv517545 Chr.1:228268446 - 228498298 on Build GRCh38 Loss TRIM17 HIST3H3 HIST3H2BB MIR4666A OBSCN TRIM11 HIST3H2A RNF187 LOC101927401 MIR6742
nsv1013500 Chr.1:228271433 - 228713854 on Build GRCh38 Gain HIST3H3 OBSCN RNA5S10 BTNL10 RNA5S15 RHOU RNF187 RNA5S12 RNA5S14 RNA5S7 RNA5S8 MIR4666A RNA5S4 RNA5S3 HIST3H2A LOC101927401 TRIM17 RNA5S1 RNA5S5 RNA5S6 LOC105373132 RNA5S9 RNA5S17 RNA5S16 RNA5S11 RNA5S2 RNA5S13 HIST3H2BB TRIM11 DUSP5P1 MIR6742
nsv827019 Chr.1:228126466 - 228463319 on Build GRCh38 Loss TRIM17 HIST3H3 OBSCN GJC2 IBA57 IBA57-AS1 C1orf145 HIST3H2BB MIR4666A TRIM11 GUK1 HIST3H2A LOC101927401 MIR6742
nsv523935 Chr.1:227850423 - 228494048 on Build GRCh38 Loss HIST3H3 LOC107985355 OBSCN MRPL55 RNF187 WNT9A IBA57 IBA57-AS1 LOC100506571 MIR4666A GUK1 C1orf35 HIST3H2A LOC101927401 TRIM17 MIR3620 LOC101060022 ARF1 GJC2 WNT3A C1orf145 MIR5008 HIST3H2BB TRIM11 MIR6742
dgv840n54 Chr.1:228276547 - 228369087 on Build GRCh38 Loss OBSCN LOC101927401
nsv508697 Chr.1:228352336 - 228434913 on Build GRCh38 Deletion TRIM17 HIST3H3 OBSCN TRIM11 LOC101927401 MIR6742
nsv952140 Chr.1:228331100 - 228380999 on Build GRCh38 Deletion OBSCN LOC101927401

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