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See other GJC2 CNV Assays ›
Gene Symbol
GJC2
Assay Reference Genome
Location

Chr.1:228156883 on build GRCh38
Cytoband
1q42.13
Assay ID Hs03377890_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 57165

Gene Name:

 gap junction protein gamma 2

Gene Aliases:

 CX46.6, Cx47, GJA12, HLD2, LMPH1C, PMLDAR, SPG44

Location:

 Chr.1:228149714-228159826 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
GJC2 NM_020435.3 NP_065168.2
BC035840.1 AAH35840.1
BC089439.1 AAH89439.1
CF132637.1
EU433401.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv952137 Chr.1:228140600 - 228182899 on Build GRCh38 Deletion GUK1 IBA57 IBA57-AS1 GJC2
nsv826908 Chr.1:227707685 - 228503399 on Build GRCh38 Gain WNT3A MRPL55 IBA57-AS1 MIR6742 LOC101060022 ARF1 OBSCN LOC100506571 HIST3H2BB TRIM11 SNAP47 PRSS38 MIR4666A LOC105373289 JMJD4 TRIM17 WNT9A C1orf35 LOC107985355 MIR5008 GUK1 HIST3H2A IBA57 LOC101927401 RNF187 MIR3620 GJC2 C1orf145 HIST3H3
nsv1160102 Chr.1:228081212 - 228239280 on Build GRCh38 Deletion MRPL55 ARF1 OBSCN GUK1 IBA57 IBA57-AS1 MIR3620 GJC2 C1orf145 C1orf35
esv32853 Chr.1:227692415 - 228670462 on Build GRCh38 Gain MRPL55 RNA5S9 RNA5S4 RNA5S13 RNA5S16 LOC101060022 BTNL10 RNA5S1 OBSCN LOC100506571 RNA5S12 RNA5S15 SNAP47 RNA5S6 PRSS38 MIR4666A RNA5S7 LOC105373289 RNA5S3 TRIM17 LOC105373132 WNT9A RNA5S11 RHOU MIR5008 IBA57 MIR3620 GJC2 RNA5S2 RNA5S5 WNT3A IBA57-AS1 MIR6742 ARF1 HIST3H2BB TRIM11 RNA5S10 JMJD4 DUSP5P1 RNA5S14 C1orf35 LOC107985355 RNA5S8 GUK1 HIST3H2A LOC101927401 RNF187 RNA5S17 C1orf145 HIST3H3
nsv827031 Chr.1:228156381 - 228162089 on Build GRCh38 Gain GJC2
nsv827019 Chr.1:228126466 - 228463319 on Build GRCh38 Loss IBA57-AS1 MIR6742 TRIM17 OBSCN HIST3H2BB GUK1 HIST3H2A IBA57 LOC101927401 TRIM11 GJC2 C1orf145 HIST3H3 MIR4666A
nsv523935 Chr.1:227850423 - 228494048 on Build GRCh38 Loss WNT3A MRPL55 IBA57-AS1 MIR6742 LOC101060022 ARF1 OBSCN LOC100506571 HIST3H2BB TRIM11 MIR4666A TRIM17 WNT9A C1orf35 LOC107985355 MIR5008 GUK1 HIST3H2A IBA57 LOC101927401 RNF187 MIR3620 GJC2 C1orf145 HIST3H3
dgv839n54 Chr.1:228139958 - 228183397 on Build GRCh38 Loss GUK1 IBA57 IBA57-AS1 GJC2
nsv549290 Chr.1:228145951 - 228162105 on Build GRCh38 Loss GUK1 GJC2
nsv549291 Chr.1:228151238 - 228163073 on Build GRCh38 Loss GJC2

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

gap junction

Gene Ontology Categories:

Function(s) Process(es)


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