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See other RNF223 CNV Assays ›
Gene Symbol
RNF223
Assay Reference Genome
Location

Chr.1:1070008 on build GRCh38
Cytoband
1p36.33
Assay ID Hs03380793_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 401934

Gene Name:

 ring finger protein 223

Gene Aliases:

 -

Location:

 Chr.1:1065635-1074307 on Build GRCh38

Assay Gene Location:

 Within Exon 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
RNF223 XM_017001286.1 2 2860 XP_016856775.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv945741 Chr.1:1007194 - 1092619 on Build GRCh38 Duplication RNF223 AGRN C1orf159 LOC100288175 ISG15 LOC105378948
nsv509146 Chr.1:1010510 - 1111188 on Build GRCh38 Insertion RNF223 AGRN C1orf159 LOC100288175 ISG15 LOC105378948
esv2762302 Chr.1:914637 - 1106320 on Build GRCh38 Gain SAMD11 LOC100130417 LOC284600 LOC100288175 PERM1 ISG15 PLEKHN1 HES4 LOC107985728 RNF223 AGRN KLHL17 C1orf159 LOC105378948 NOC2L
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss LINC00115 LOC100132287 ISG15 PRKCZ LOC102725121 TMEM240 MMP23B FAM138A UBE2J2 MIR200B ACAP3 B3GALT6 MIR6723 LOC107985729 LOC100288175 PLEKHN1 CFAP74 OR4F16 LOC100133331 LOC105378591 LOC107985728 LINC01128 LOC100287934 RNF223 CALML6 GABRD LOC105378948 TNFRSF4 FAM132A PUSL1 MRPL20 TMEM52 CCNL2 MIR6859-1 SKI AURKAIP1 MORN1 MIR6726 LOC100129534 CDK11B SLC35E2B LOC729737 LOC100130417 SLC35E2 VWA1 MMP23A CPTP ATAD3C ANKRD65 KLHL17 FNDC10 LOC107984841 SDF4 FAM41C LOC284600 LOC100506504 MIR200A MIR429 DVL1 SSU72 ATAD3A MXRA8 NOC2L TAS1R3 MIR6808 PERM1 LOC101928626 DDX11L1 TTLL10-AS1 FAAP20 TTLL10 OR4F29 MIR6727 MIB2 MTND1P23 LOC148413 OR4F5 LINC01342 LOC105378589 LOC100288069 LOC105378592 NADK TNFRSF18 WASH7P TMEM88B LOC105378949 ATAD3B MIR6859-2 CPSF3L MTND2P28 SCNN1D LOC100134822 SAMD11 GNB1 CDK11A HES4 MIR1302-2 LOC102724312 FAM87B LOC105378947 AGRN C1orf159
nsv950451 Chr.1:899421 - 1094520 on Build GRCh38 Deletion SAMD11 LOC100130417 LOC284600 LOC100288175 PERM1 ISG15 PLEKHN1 HES4 LOC107985728 RNF223 AGRN KLHL17 C1orf159 LOC105378948 NOC2L
nsv1003578 Chr.1:1068249 - 1282706 on Build GRCh38 Gain SDF4 SCNN1D LINC01342 TNFRSF18 MIR200A MIR429 TTLL10-AS1 RNF223 UBE2J2 C1orf159 MIR200B LOC105378948 TNFRSF4 TTLL10 FAM132A B3GALT6
nsv1160772 Chr.1:1027585 - 1333467 on Build GRCh38 Duplication SDF4 LINC01342 PUSL1 TNFRSF18 MIR200A MIR429 UBE2J2 MIR6726 MIR200B CPSF3L ACAP3 B3GALT6 SCNN1D TAS1R3 LOC100288175 CPTP TTLL10-AS1 RNF223 AGRN C1orf159 LOC105378948 TNFRSF4 TTLL10 FAM132A MIR6727
nsv428334 Chr.1:874371 - 1220569 on Build GRCh38 Gain SDF4 LINC01342 FAM41C LOC284600 ISG15 TNFRSF18 MIR200A MIR429 MIR200B NOC2L SAMD11 LOC100130417 LOC100288175 PERM1 PLEKHN1 HES4 LOC107985728 TTLL10-AS1 RNF223 AGRN KLHL17 C1orf159 LOC105378948 TNFRSF4 TTLL10
nsv10161 Chr.1:776731 - 1777210 on Build GRCh38 Gain+Loss SDF4 LINC00115 FAM41C LOC284600 ISG15 TMEM240 MIR200A MIR429 MMP23B DVL1 SSU72 UBE2J2 ATAD3A MIR200B MXRA8 ACAP3 NOC2L B3GALT6 TAS1R3 MIR6808 LOC107985729 LOC100288175 PERM1 PLEKHN1 LOC107985728 TTLL10-AS1 LINC01128 LOC100287934 RNF223 LOC105378948 TNFRSF4 TTLL10 FAM132A MIR6727 MIB2 LOC148413 LINC01342 LOC100288069 PUSL1 NADK MRPL20 TNFRSF18 CCNL2 TMEM88B AURKAIP1 MIR6726 ATAD3B CDK11B SLC35E2B CPSF3L SCNN1D SAMD11 LOC100130417 SLC35E2 VWA1 MMP23A CPTP CDK11A ATAD3C ANKRD65 HES4 LOC102724312 FAM87B AGRN KLHL17 C1orf159 FNDC10
dgv5n100 Chr.1:585989 - 1114424 on Build GRCh38 Gain MTND1P23 LINC00115 FAM41C LOC100288069 LOC284600 ISG15 NOC2L MTND2P28 SAMD11 LOC100130417 MIR6723 LOC100288175 PERM1 PLEKHN1 LOC101928626 OR4F16 LOC100133331 HES4 LOC107985728 LINC01128 FAM87B LOC105378947 LOC100287934 RNF223 AGRN KLHL17 C1orf159 LOC105378948 LOC107984841
nsv517709 Chr.1:817186 - 1275912 on Build GRCh38 Gain+Loss SDF4 LINC00115 LINC01342 FAM41C LOC284600 ISG15 TNFRSF18 MIR200A MIR429 UBE2J2 MIR200B NOC2L B3GALT6 SAMD11 LOC100130417 LOC100288175 PERM1 PLEKHN1 HES4 LOC107985728 TTLL10-AS1 LINC01128 FAM87B RNF223 AGRN KLHL17 C1orf159 LOC105378948 TNFRSF4 TTLL10 FAM132A
nsv1013524 Chr.1:939510 - 1161955 on Build GRCh38 Gain SAMD11 LINC01342 LOC100288175 PERM1 ISG15 PLEKHN1 HES4 RNF223 AGRN KLHL17 C1orf159 LOC105378948 NOC2L
nsv1160644 Chr.1:939652 - 1220663 on Build GRCh38 Deletion SDF4 SAMD11 LINC01342 LOC100288175 PERM1 ISG15 PLEKHN1 TNFRSF18 MIR200A HES4 MIR429 TTLL10-AS1 RNF223 AGRN KLHL17 C1orf159 MIR200B LOC105378948 TNFRSF4 TTLL10 NOC2L
dgv2n67 Chr.1:877618 - 1426500 on Build GRCh38 Gain SDF4 LOC148413 LINC01342 LOC284600 ISG15 PUSL1 MRPL20 TNFRSF18 MIR200A MIR429 CCNL2 DVL1 TMEM88B UBE2J2 AURKAIP1 MIR6726 MIR200B MXRA8 CPSF3L ACAP3 NOC2L B3GALT6 SCNN1D SAMD11 LOC100130417 TAS1R3 MIR6808 LOC100288175 PERM1 PLEKHN1 CPTP ANKRD65 HES4 LOC107985728 TTLL10-AS1 RNF223 AGRN KLHL17 C1orf159 LOC105378948 TNFRSF4 TTLL10 FAM132A MIR6727

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

Gene Ontology Categories:

Process(es)


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