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See other GJC2 CNV Assays ›
Gene Symbol
GJC2
Assay Reference Genome
Location

Chr.1:228155990 on build GRCh38
Cytoband
1q42.13
Assay ID Hs03381198_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 57165

Gene Name:

 gap junction protein gamma 2

Gene Aliases:

 CX46.6, Cx47, GJA12, HLD2, LMPH1C, PMLDAR, SPG44

Location:

 Chr.1:228149714-228159826 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
GJC2 NM_020435.3 NP_065168.2
BC035840.1 AAH35840.1
BC089439.1 AAH89439.1
CF132637.1
EU433401.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv952137 Chr.1:228140600 - 228182899 on Build GRCh38 Deletion IBA57 IBA57-AS1 GJC2 GUK1
nsv826908 Chr.1:227707685 - 228503399 on Build GRCh38 Gain JMJD4 C1orf35 LOC105373289 OBSCN LOC107985355 WNT3A MIR6742 LOC101060022 MIR3620 HIST3H3 MIR4666A TRIM11 ARF1 PRSS38 MRPL55 GUK1 HIST3H2BB IBA57-AS1 TRIM17 SNAP47 LOC101927401 IBA57 MIR5008 HIST3H2A WNT9A GJC2 RNF187 LOC100506571 C1orf145
nsv1160102 Chr.1:228081212 - 228239280 on Build GRCh38 Deletion C1orf35 IBA57 IBA57-AS1 OBSCN MIR3620 GJC2 ARF1 MRPL55 GUK1 C1orf145
esv32853 Chr.1:227692415 - 228670462 on Build GRCh38 Gain JMJD4 LOC105373289 OBSCN WNT3A LOC101060022 MIR3620 HIST3H3 TRIM11 ARF1 RNA5S3 GUK1 HIST3H2BB RNA5S13 TRIM17 RNA5S16 SNAP47 RNA5S14 LOC101927401 RNA5S2 RNA5S1 WNT9A RNA5S10 RNF187 RNA5S8 C1orf145 C1orf35 LOC107985355 LOC105373132 MIR6742 RNA5S17 RNA5S6 RNA5S4 MIR4666A RNA5S7 PRSS38 RHOU MRPL55 RNA5S15 IBA57-AS1 DUSP5P1 RNA5S5 RNA5S9 RNA5S12 IBA57 MIR5008 HIST3H2A RNA5S11 GJC2 LOC100506571 BTNL10
nsv827019 Chr.1:228126466 - 228463319 on Build GRCh38 Loss HIST3H2BB IBA57-AS1 OBSCN TRIM17 MIR6742 LOC101927401 IBA57 HIST3H2A HIST3H3 MIR4666A GJC2 TRIM11 GUK1 C1orf145
nsv523935 Chr.1:227850423 - 228494048 on Build GRCh38 Loss C1orf35 OBSCN LOC107985355 WNT3A MIR6742 LOC101060022 MIR3620 HIST3H3 MIR4666A TRIM11 ARF1 MRPL55 GUK1 HIST3H2BB IBA57-AS1 TRIM17 LOC101927401 IBA57 MIR5008 HIST3H2A WNT9A GJC2 RNF187 LOC100506571 C1orf145
dgv839n54 Chr.1:228139958 - 228183397 on Build GRCh38 Loss IBA57 IBA57-AS1 GJC2 GUK1
nsv549290 Chr.1:228145951 - 228162105 on Build GRCh38 Loss GJC2 GUK1
nsv549291 Chr.1:228151238 - 228163073 on Build GRCh38 Loss GJC2

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

gap junction

Gene Ontology Categories:

Function(s) Process(es)


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