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See other CHD1L CNV Assays ›
Gene Symbol
CHD1L
Assay Reference Genome
Location

Chr.1:147198106 on build GRCh38
Cytoband
1q21.1
Assay ID Hs03385162_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 9557

Gene Name:

 chromodomain helicase DNA binding protein 1 like

Gene Aliases:

 ALC1, CHDL

Location:

 Chr.1:147172804-147295766 on Build GRCh38

Assay Gene Location:

 Within Intron 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CHD1L XM_017002858.1 XP_016858347.1

Target Gene Details

Entrez Gene ID:

 2330

Gene Name:

 flavin containing monooxygenase 5

Gene Aliases:

 -

Location:

 Chr.1:147183963-147225798 on Build GRCh38

Assay Gene Location:

 Within Intron 8
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
FMO5 NM_001144829.2 NP_001138301.1
NM_001144830.2 NP_001138302.1
NM_001461.3 NP_001452.2
XM_005272946.4 XP_005273003.1
XM_005272947.4 XP_005273004.1
XM_005272948.4 XP_005273005.1
XM_006711245.3 XP_006711308.1
XM_011509350.2 XP_011507652.1
XM_011509351.2 XP_011507653.1
XM_017000801.1 XP_016856290.1
XM_017000802.1 XP_016856291.1
AK222728.1 BAD96448.1
AK225739.1
AK314647.1
BC035687.1 AAH35687.1
L37080.1 AAA67849.1
Z47553.1 CAA87633.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1005055 Chr.1:145642988 - 148991068 on Build GRCh38 Loss CH17-408M7.1 ANKRD35 LIX1L RBM8A NBPF12 NUDT17 ACP6 NBPF10 PRKAB2 LINC01138 ITGA10 NUDT4P1 GJA5 GPR89B LOC100996763 LOC101927468 PPIAL4G GNRHR2 NBPF11 HFE2 POLR3C HYDIN2 LOC728989 NOTCH2NL MIR5087 FMO5 LOC105371226 LOC100996517 BCL9 RNVU1-1 ANKRD34A TXNIP LOC284561 CD160 RNF115 LOC100132057 GJA8 LOC101928979 RNU1-13P RNVU1-7 PIAS3 NBPF13P NBPF14 PDE4DIP NUDT4P2 RNVU1-6 MIR6736 GPR89A LOC100505824 PDZK1 LOC105371242 MIR6077 PEX11B PDZK1P1 PDIA3P1 RNVU1-3 LINC00624 CHD1L RNVU1-8 POLR3GL
dgv327n100 Chr.1:146028214 - 148860637 on Build GRCh38 Gain CH17-408M7.1 LOC284561 NBPF12 LOC100132057 GJA8 ACP6 LOC101928979 RNU1-13P NBPF10 PRKAB2 RNVU1-7 LINC01138 NUDT4P1 GJA5 GPR89B NBPF13P LOC100996763 LOC101927468 NBPF14 PDE4DIP NUDT4P2 PPIAL4G RNVU1-6 NBPF11 LOC100505824 HYDIN2 LOC728989 LOC105371242 MIR6077 NOTCH2NL MIR5087 FMO5 PDZK1P1 PDIA3P1 RNVU1-3 LOC105371226 LINC00624 LOC100996517 CHD1L RNVU1-8 BCL9 RNVU1-1
esv2761299 Chr.1:146068341 - 148926801 on Build GRCh38 Gain+Loss CH17-408M7.1 LOC284561 NBPF12 LOC100132057 GJA8 ACP6 RNU1-13P NBPF10 PRKAB2 RNVU1-7 LINC01138 NUDT4P1 GJA5 GPR89B NBPF13P LOC100996763 LOC101927468 NBPF14 PDE4DIP NUDT4P2 PPIAL4G NBPF11 LOC100505824 HYDIN2 LOC728989 LOC105371242 MIR6077 NOTCH2NL MIR5087 FMO5 PDZK1P1 PDIA3P1 RNVU1-3 LOC105371226 LINC00624 LOC100996517 CHD1L RNVU1-8 BCL9 RNVU1-1
nsv1077657 Chr.1:147010816 - 147207577 on Build GRCh38 Deletion LOC728989 PRKAB2 FMO5 NBPF13P PDIA3P1 CHD1L RNVU1-8
dgv67e199 Chr.1:147188956 - 147198583 on Build GRCh38 Deletion FMO5 CHD1L
nsv509457 Chr.1:145948024 - 149021821 on Build GRCh38 Insertion TXNIP CH17-408M7.1 LOC284561 LIX1L NBPF12 LOC100132057 GJA8 ACP6 LOC101928979 RNU1-13P NBPF10 PRKAB2 RNVU1-7 LINC01138 NUDT4P1 GJA5 GPR89B NBPF13P LOC100996763 LOC101927468 NBPF14 PDE4DIP NUDT4P2 PPIAL4G RNVU1-6 NBPF11 HFE2 LOC100505824 HYDIN2 LOC728989 LOC105371242 MIR6077 NOTCH2NL MIR5087 FMO5 PDZK1P1 PDIA3P1 RNVU1-3 LOC105371226 LINC00624 LOC100996517 CHD1L RNVU1-8 BCL9 RNVU1-1 ANKRD34A POLR3GL
nsv1132304 Chr.1:146186094 - 148977674 on Build GRCh38 Duplication CH17-408M7.1 LOC284561 NBPF12 LOC100132057 GJA8 ACP6 RNU1-13P PRKAB2 RNVU1-7 LINC01138 NUDT4P1 GJA5 GPR89B NBPF13P LOC100996763 LOC101927468 NBPF14 PDE4DIP NUDT4P2 PPIAL4G NBPF11 LOC100505824 HYDIN2 LOC728989 LOC105371242 MIR6077 NOTCH2NL MIR5087 FMO5 PDZK1P1 PDIA3P1 RNVU1-3 LOC105371226 LINC00624 LOC100996517 CHD1L RNVU1-8 BCL9 RNVU1-1
nsv1003688 Chr.1:146036817 - 148934526 on Build GRCh38 Gain CH17-408M7.1 LOC284561 NBPF12 LOC100132057 GJA8 ACP6 LOC101928979 RNU1-13P NBPF10 PRKAB2 RNVU1-7 LINC01138 NUDT4P1 GJA5 GPR89B NBPF13P LOC100996763 LOC101927468 NBPF14 PDE4DIP NUDT4P2 PPIAL4G RNVU1-6 NBPF11 LOC100505824 HYDIN2 LOC728989 LOC105371242 MIR6077 NOTCH2NL MIR5087 FMO5 PDZK1P1 PDIA3P1 RNVU1-3 LOC105371226 LINC00624 LOC100996517 CHD1L RNVU1-8 BCL9 RNVU1-1
dgv66e199 Chr.1:146055970 - 149056514 on Build GRCh38 Deletion CH17-408M7.1 LOC284561 NBPF12 LOC100132057 GJA8 ACP6 LOC101928979 RNU1-13P NBPF10 PRKAB2 RNVU1-7 LINC01138 NUDT4P1 GJA5 GPR89B NBPF13P LOC100996763 LOC101927468 NBPF14 PDE4DIP NUDT4P2 PPIAL4G NBPF11 LOC100505824 HYDIN2 NBPF9 LOC728989 LOC105371242 MIR6077 NOTCH2NL MIR5087 FMO5 PDZK1P1 PDIA3P1 RNVU1-3 LOC105371226 LINC00624 LOC100996517 CHD1L RNVU1-8 BCL9 RNVU1-1
nsv437047 Chr.1:147171976 - 147369886 on Build GRCh38 Loss PRKAB2 FMO5 PDIA3P1 CHD1L
esv3587435 Chr.1:147189056 - 147198713 on Build GRCh38 Loss FMO5 CHD1L

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