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See other ACAP3 CNV Assays ›
Gene Symbol
ACAP3
Assay Reference Genome
Location

Chr.1:1292880 on build GRCh38
Cytoband
1p36.33
Assay ID Hs03386018_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 116983

Gene Name:

 ArfGAP with coiled-coil, ankyrin repeat and PH domains 3

Gene Aliases:

 CENTB5

Location:

 Chr.1:1292384-1307925 on Build GRCh38

Assay Gene Location:

 Within Exon 25
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ACAP3 NM_030649.2 24 3263 NP_085152.2
XM_005244715.2 23 3200 XP_005244772.1
XM_005244717.3 12 2257 XP_005244774.1
XM_011540606.2 24 3312 XP_011538908.1
XM_011540607.1 24 5736 XP_011538909.1
XM_011540608.2 23 3217 XP_011538910.1
XM_011540609.2 23 3214 XP_011538911.1
XM_017000233.1 24 3452 XP_016855722.1
AB051503.1 22 4829 BAB21807.1
AK093954.1 BAC04257.1
BC004874.2 9 1867 AAH04874.2
BC021851.1 7 1653 AAH21851.1
BC029929.1 4 1066 AAH29929.1
BC051194.1 24 3263 AAH51194.2

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv817616 Chr.1:1257135 - 1306704 on Build GRCh38 Loss UBE2J2 SCNN1D ACAP3 MIR6726
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss PERM1 SLC35E2 FAM138A LOC729737 MIB2 CALML6 MMP23A FAM87B ACAP3 MIR6726 LOC100288175 LOC101928626 MMP23B LOC105378592 CPSF3L TNFRSF18 HES4 UBE2J2 MIR429 LOC102725121 MIR6808 LOC105378591 ATAD3B LOC148413 MIR6727 CPTP LINC01128 AGRN MIR6859-1 LOC100132287 MXRA8 ATAD3C C1orf159 LINC00115 FNDC10 AURKAIP1 LINC01342 CFAP74 TTLL10-AS1 MTND1P23 TMEM88B ATAD3A TTLL10 TMEM52 WASH7P SLC35E2B NADK TAS1R3 LOC100129534 ISG15 DVL1 LOC100130417 GABRD LOC100134822 MIR6723 LOC105378949 OR4F16 CCNL2 LOC100288069 LOC100506504 TMEM240 LOC105378947 FAM41C B3GALT6 SKI MIR6859-2 MORN1 LOC105378589 TNFRSF4 MIR200B LOC102724312 LOC105378948 OR4F29 LOC100133331 SSU72 FAAP20 RNF223 CDK11B SDF4 VWA1 MRPL20 LOC284600 FAM132A LOC107984841 SAMD11 LOC107985728 MIR1302-2 OR4F5 NOC2L LOC107985729 LOC100287934 CDK11A PUSL1 MTND2P28 SCNN1D GNB1 PLEKHN1 KLHL17 PRKCZ ANKRD65 MIR200A DDX11L1
nsv544965 Chr.1:1217251 - 1306704 on Build GRCh38 Loss FAM132A UBE2J2 SCNN1D ACAP3 MIR6726 SDF4 B3GALT6
dgv25n54 Chr.1:1290683 - 1306366 on Build GRCh38 Loss SCNN1D ACAP3 MIR6726
nsv544947 Chr.1:1070426 - 1306704 on Build GRCh38 Loss C1orf159 RNF223 LINC01342 TTLL10-AS1 SDF4 TNFRSF18 TTLL10 B3GALT6 FAM132A UBE2J2 MIR429 SCNN1D TNFRSF4 MIR200A MIR200B ACAP3 MIR6726
nsv1160772 Chr.1:1027585 - 1333467 on Build GRCh38 Duplication RNF223 MIR6727 CPTP SDF4 FAM132A AGRN ACAP3 MIR6726 LOC100288175 C1orf159 LINC01342 CPSF3L TTLL10-AS1 TNFRSF18 TTLL10 B3GALT6 PUSL1 UBE2J2 MIR429 SCNN1D TAS1R3 TNFRSF4 MIR200A MIR200B LOC105378948
nsv1160788 Chr.1:1282706 - 1376336 on Build GRCh38 Deletion DVL1 PUSL1 SCNN1D MXRA8 MIR6727 AURKAIP1 TAS1R3 CPSF3L MIR6808 ACAP3 MIR6726 CPTP
nsv10161 Chr.1:776731 - 1777210 on Build GRCh38 Gain+Loss DVL1 PERM1 SLC35E2 LOC100130417 MIB2 MMP23A FAM87B CCNL2 ACAP3 MIR6726 LOC100288069 TMEM240 LOC100288175 FAM41C MMP23B CPSF3L TNFRSF18 B3GALT6 HES4 UBE2J2 MIR429 MIR6808 TNFRSF4 MIR200B LOC102724312 LOC105378948 ATAD3B SSU72 RNF223 CDK11B LOC148413 MIR6727 CPTP SDF4 VWA1 LINC01128 MRPL20 LOC284600 FAM132A AGRN SAMD11 LOC107985728 MXRA8 ATAD3C NOC2L C1orf159 LINC00115 FNDC10 AURKAIP1 LOC107985729 LINC01342 TTLL10-AS1 TMEM88B ATAD3A LOC100287934 CDK11A TTLL10 PUSL1 SLC35E2B SCNN1D NADK PLEKHN1 KLHL17 TAS1R3 ANKRD65 MIR200A ISG15
nsv950452 Chr.1:1106921 - 1637538 on Build GRCh38 Deletion ATAD3B DVL1 SSU72 CDK11B LOC148413 MIR6727 MIB2 CPTP SDF4 VWA1 MRPL20 FAM132A MXRA8 CCNL2 ATAD3C ACAP3 MIR6726 TMEM240 C1orf159 FNDC10 MMP23B AURKAIP1 LOC107985729 LINC01342 CPSF3L TTLL10-AS1 TMEM88B ATAD3A TNFRSF18 TTLL10 B3GALT6 PUSL1 UBE2J2 MIR429 SCNN1D TAS1R3 ANKRD65 MIR6808 TNFRSF4 MIR200A MIR200B LOC102724312
nsv1000169 Chr.1:1281678 - 1362354 on Build GRCh38 Gain DVL1 PUSL1 SCNN1D MXRA8 MIR6727 TAS1R3 CPSF3L MIR6808 ACAP3 MIR6726 CPTP
esv2758912 Chr.1:1263940 - 1384492 on Build GRCh38 Loss DVL1 MIR6727 AURKAIP1 CPSF3L CPTP PUSL1 UBE2J2 SCNN1D MXRA8 TAS1R3 MIR6808 ACAP3 MIR6726
dgv2n67 Chr.1:877618 - 1426500 on Build GRCh38 Gain DVL1 PERM1 LOC100130417 RNF223 LOC148413 MIR6727 CPTP SDF4 MRPL20 LOC284600 FAM132A AGRN SAMD11 LOC107985728 MXRA8 CCNL2 ACAP3 MIR6726 LOC100288175 NOC2L C1orf159 AURKAIP1 LINC01342 CPSF3L TTLL10-AS1 TMEM88B TNFRSF18 TTLL10 B3GALT6 PUSL1 HES4 UBE2J2 MIR429 SCNN1D PLEKHN1 KLHL17 TAS1R3 ANKRD65 MIR6808 TNFRSF4 MIR200A MIR200B LOC105378948 ISG15
nsv469848 Chr.1:1146082 - 1322235 on Build GRCh38 Gain MIR6727 CPSF3L TTLL10-AS1 SDF4 TNFRSF18 TTLL10 B3GALT6 FAM132A PUSL1 UBE2J2 MIR429 SCNN1D TNFRSF4 MIR200A MIR200B ACAP3 MIR6726

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

Gene Ontology Categories:

Function(s) Process(es)


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