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See other ARHGEF4 CNV Assays ›
Gene Symbol
ARHGEF4
Assay Reference Genome
Location

Chr.2:130842541 on build GRCh38
Cytoband
2q21.1
Assay ID Hs03395309_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 50649

Gene Name:

 Rho guanine nucleotide exchange factor 4

Gene Aliases:

 ASEF, ASEF1, GEF4, STM6

Location:

 Chr.2:130836916-131047253 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ARHGEF4 XM_005263681.1 XP_005263738.1
XM_005263685.3 XP_005263742.1
XM_011511274.2 XP_011509576.1
XM_017004231.1 XP_016859720.1
AK127124.1

Target Gene Details

Entrez Gene ID:

 653269

Gene Name:

 POTE ankyrin domain family member I

Gene Aliases:

 POTE2beta

Location:

 Chr.2:130462245-131626428 on Build GRCh38

Assay Gene Location:
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
POTEI

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv4074n100 Chr.2:130550793 - 131291209 on Build GRCh38 Gain ARHGEF4 POTEI PLEKHB2 CFC1 POTEE FAM168B LOC440910 TISP43 GPR148 POTEJ CYP4F30P AMER3
dgv731e199 Chr.2:130678437 - 131300107 on Build GRCh38 Deletion ARHGEF4 POTEI PLEKHB2 POTEE FAM168B LOC440910 GPR148 CYP4F30P AMER3
esv2670824 Chr.2:130625264 - 131605218 on Build GRCh38 Deletion LINC01120 POTEI PLEKHB2 CCDC74A TUBA3D POTEE FAM168B WTH3DI GPR148 LOC150776 MZT2A CYP4F30P POTEKP ARHGEF4 LOC440910 NOC2LP2 POTEJ AMER3 MIR4784
nsv583136 Chr.2:130730100 - 130846832 on Build GRCh38 Loss ARHGEF4 POTEI GPR148 AMER3
nsv1014723 Chr.2:130720375 - 131379551 on Build GRCh38 Loss ARHGEF4 POTEI PLEKHB2 POTEE FAM168B WTH3DI LOC440910 GPR148 AMER3
nsv2925 Chr.2:130841107 - 130887218 on Build GRCh38 Deletion ARHGEF4 POTEI
esv3893337 Chr.2:130722838 - 131194387 on Build GRCh38 Loss ARHGEF4 POTEI PLEKHB2 FAM168B GPR148 AMER3
dgv616e201 Chr.2:130674635 - 131312550 on Build GRCh38 Deletion ARHGEF4 POTEI PLEKHB2 POTEE FAM168B LOC440910 GPR148 CYP4F30P AMER3
nsv583135 Chr.2:130724905 - 131194388 on Build GRCh38 Loss ARHGEF4 POTEI PLEKHB2 FAM168B GPR148 AMER3
nsv524021 Chr.2:130724906 - 131553515 on Build GRCh38 Loss LINC01120 POTEI PLEKHB2 CCDC74A TUBA3D POTEE FAM168B WTH3DI GPR148 LOC150776 MZT2A ARHGEF4 LOC440910 NOC2LP2 AMER3 MIR4784
esv2760576 Chr.2:130634172 - 131521752 on Build GRCh38 Gain+Loss LINC01120 POTEI PLEKHB2 TUBA3D POTEE FAM168B WTH3DI GPR148 LOC150776 MZT2A CYP4F30P ARHGEF4 LOC440910 NOC2LP2 POTEJ AMER3 MIR4784
esv2759092 Chr.2:129589265 - 132440430 on Build GRCh38 Gain+Loss LINC01120 FAM201B TUBA3E WTH3DI POTEF LOC389033 IMP4 LOC150776 CYP4F30P ZNF806 ARHGEF4 CCDC115 GPR39 FAR2P2 LOC440910 RAB6C AMER3 MIR4784 LOC101927924 C2orf27A CCDC74A TUBA3D SMPD4 FAM168B MZT2B LOC646743 LOC100507460 MZT2A CYP4F62P TISP43 POTEE RAB6C-AS1 MED15P9 GPR148 POTEKP C2orf27B LINC01087 NOC2LP1 CFC1B POTEI PLEKHB2 LOC107985778 MIR663B PTPN18 CFC1 FAR2P1 ANKRD30BL NOC2LP2 POTEJ CCDC74B
nsv428403 Chr.2:129818076 - 130882067 on Build GRCh38 Loss RAB6C-AS1 TUBA3E POTEF LOC389033 IMP4 MED15P9 GPR148 CYP4F30P ARHGEF4 CCDC115 FAR2P2 NOC2LP1 CFC1B RAB6C AMER3 LOC101927924 POTEI SMPD4 MZT2B LOC107985778 LOC646743 PTPN18 CFC1 FAR2P1 CYP4F62P TISP43 POTEJ CCDC74B
nsv523500 Chr.2:130835472 - 130853759 on Build GRCh38 Loss ARHGEF4 POTEI

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More Information


Additional Information:

For this assay, SNP(s) [rs78882055] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Gene Ontology Categories:

Function(s) Process(es)


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