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See other ARHGEF4 CNV Assays ›
Gene Symbol
ARHGEF4
Assay Reference Genome
Location

Chr.2:130847830 on build GRCh38
Cytoband
2q21.1
Assay ID Hs03431718_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 50649

Gene Name:

 Rho guanine nucleotide exchange factor 4

Gene Aliases:

 ASEF, ASEF1, GEF4, STM6

Location:

 Chr.2:130836916-131047253 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ARHGEF4 XM_005263681.1 XP_005263738.1
XM_005263685.3 XP_005263742.1
XM_011511274.2 XP_011509576.1
XM_017004231.1 XP_016859720.1
AK127124.1

Target Gene Details

Entrez Gene ID:

 653269

Gene Name:

 POTE ankyrin domain family member I

Gene Aliases:

 POTE2beta

Location:

 Chr.2:130462245-131626428 on Build GRCh38

Assay Gene Location:
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
POTEI

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv4074n100 Chr.2:130550793 - 131291209 on Build GRCh38 Gain LOC440910 PLEKHB2 POTEI POTEJ CYP4F30P POTEE CFC1 ARHGEF4 FAM168B GPR148 AMER3 TISP43
dgv731e199 Chr.2:130678437 - 131300107 on Build GRCh38 Deletion LOC440910 PLEKHB2 POTEI CYP4F30P POTEE ARHGEF4 FAM168B GPR148 AMER3
esv2670824 Chr.2:130625264 - 131605218 on Build GRCh38 Deletion PLEKHB2 POTEI MZT2A POTEJ POTEE ARHGEF4 LOC150776 GPR148 NOC2LP2 POTEKP LOC440910 CCDC74A WTH3DI CYP4F30P FAM168B LINC01120 AMER3 TUBA3D MIR4784
nsv1014723 Chr.2:130720375 - 131379551 on Build GRCh38 Loss LOC440910 PLEKHB2 POTEI WTH3DI POTEE ARHGEF4 FAM168B GPR148 AMER3
nsv2925 Chr.2:130841107 - 130887218 on Build GRCh38 Deletion POTEI ARHGEF4
nsv517274 Chr.2:130845653 - 130865593 on Build GRCh38 Loss POTEI ARHGEF4
esv3893337 Chr.2:130722838 - 131194387 on Build GRCh38 Loss PLEKHB2 POTEI ARHGEF4 FAM168B GPR148 AMER3
dgv616e201 Chr.2:130674635 - 131312550 on Build GRCh38 Deletion LOC440910 PLEKHB2 POTEI CYP4F30P POTEE ARHGEF4 FAM168B GPR148 AMER3
nsv583135 Chr.2:130724905 - 131194388 on Build GRCh38 Loss PLEKHB2 POTEI ARHGEF4 FAM168B GPR148 AMER3
nsv524021 Chr.2:130724906 - 131553515 on Build GRCh38 Loss PLEKHB2 POTEI MZT2A POTEE ARHGEF4 LOC150776 GPR148 NOC2LP2 LOC440910 CCDC74A WTH3DI FAM168B LINC01120 AMER3 TUBA3D MIR4784
esv2760576 Chr.2:130634172 - 131521752 on Build GRCh38 Gain+Loss PLEKHB2 POTEI MZT2A POTEJ POTEE ARHGEF4 LOC150776 GPR148 NOC2LP2 LOC440910 WTH3DI CYP4F30P FAM168B LINC01120 AMER3 TUBA3D MIR4784
esv2759092 Chr.2:129589265 - 132440430 on Build GRCh38 Gain+Loss PLEKHB2 MZT2A LOC100507460 CCDC115 POTEJ POTEE PTPN18 C2orf27B ZNF806 GPR148 NOC2LP2 POTEKP LOC646743 CFC1 CYP4F62P GPR39 LINC01120 FAR2P2 LOC107985778 ARHGEF4 RAB6C-AS1 MIR663B CCDC74B CCDC74A FAM201B FAR2P1 CFC1B MIR4784 POTEI MED15P9 ANKRD30BL LOC389033 LINC01087 SMPD4 WTH3DI C2orf27A AMER3 IMP4 TUBA3D POTEF RAB6C MZT2B LOC150776 TUBA3E LOC440910 LOC101927924 CYP4F30P FAM168B TISP43 NOC2LP1
nsv428403 Chr.2:129818076 - 130882067 on Build GRCh38 Loss POTEI MED15P9 CCDC115 POTEJ LOC389033 PTPN18 GPR148 SMPD4 LOC646743 CFC1 CYP4F62P AMER3 FAR2P2 LOC107985778 IMP4 POTEF RAB6C MZT2B ARHGEF4 RAB6C-AS1 TUBA3E CCDC74B LOC101927924 CYP4F30P TISP43 NOC2LP1 FAR2P1 CFC1B
nsv523500 Chr.2:130835472 - 130853759 on Build GRCh38 Loss POTEI ARHGEF4

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More Information


Additional Information:

For this assay, SNP(s) [rs113448370] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Gene Ontology Categories:

Function(s) Process(es)


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