Hs03513025_cn

• Gene Symbol: SLBP
• Assay Reference Genome Location: Chr.4:1712759 on build GRCh38
• Cytoband: 4p16.3

Target Gene Details

• Entrez Gene ID: 7884
• Gene Name: stem-loop binding protein
• Gene Aliases: HBP
• Location: Chr.4:1692731-1712741 on Build GRCh38
• Assay Gene Location: Overlaps - Exon 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SLBP	NM_001306074.1			NP_001293003.1
	NM_001306075.1			NP_001293004.1
	NM_006527.3			NP_006518.1
	DC383752.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv2759218	Chr.4:1623665 - 1813048 on Build GRCh38	Gain	LETM1 FAM53A TMEM129 TACC3 SLBP FGFR3
nsv593316	Chr.4:1526039 - 1768630 on Build GRCh38	Gain	FAM53A TMEM129 TACC3 SLBP
dgv8901n54	Chr.4:1644637 - 1864631 on Build GRCh38	Loss	LETM1 FAM53A TMEM129 TACC3 SLBP FGFR3
nsv949756	Chr.4:1710274 - 1817773 on Build GRCh38	Deletion	LETM1 TMEM129 TACC3 SLBP FGFR3
nsv508989	Chr.4:1623823 - 1846590 on Build GRCh38	Insertion	LETM1 FAM53A TMEM129 TACC3 SLBP FGFR3
nsv1161027	Chr.4:1699833 - 1750693 on Build GRCh38	Deletion	TMEM129 TACC3 SLBP
nsv470000	Chr.4:1522203 - 1722852 on Build GRCh38	Loss	FAM53A TMEM129 TACC3 SLBP

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

RNA metabolism protein

Gene Ontology Categories:

Process(es)

termination of RNA polymerase II transcription
mRNA 3'-end processing by stem-loop binding and cleavage
mRNA export from nucleus
histone mRNA metabolic process
nuclear DNA replication
mRNA transport

Function(s)

mRNA binding
protein binding
poly(A) RNA binding
histone pre-mRNA stem-loop binding
histone pre-mRNA DCP binding