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See other C2 CNV Assays ›
Gene Symbol
C2
Assay Reference Genome
Location

Chr.6:31904974 on build GRCh38
Cytoband
6p21.33
Assay ID Hs03582484_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 717

Gene Name:

 complement component 2

Gene Aliases:

 ARMD14, CO2

Location:

 Chr.6:31897785-31945674 on Build GRCh38

Assay Gene Location:

 Within Intron 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
C2 NM_001178063.2 NP_001171534.1
NM_001282457.1 NP_001269386.1
AK096258.1
AK298311.1
AK298808.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv601960 Chr.6:31870664 - 31939370 on Build GRCh38 Loss C2 EHMT2 C2-AS1 SLC44A4 ZBTB12
nsv823505 Chr.6:31903462 - 31907392 on Build GRCh38 Loss C2
nsv1112900 Chr.6:31455323 - 33480423 on Build GRCh38 Deletion PHF1 NOTCH4 HSD17B8 SAPCD1 HCG24 LTB NCR3 LTA WDR46 PSMB8-AS1 HLA-DRB5 SLC39A7 DDAH2 VARS COL11A2 C2 LY6G6E MIR6832 C4B CFB SLC44A4 RGL2 CYP21A1P AIF1 HLA-DRA HLA-DPB2 BRD2 DAXX SNORA38 C6orf47 EGFL8 RING1 EHMT2 LOC100287329 HLA-DOB MIR3135B MCCD1 HSPA1L MIR219A1 MIR5004 PPT2 PFDN6 LSM2 VWA7 ZBTB9 PRRC2A B3GALT4 DDX39B-AS1 LY6G6D SKIV2L C2-AS1 ZBTB22 DDX39B NELFE HLA-DQB1-AS1 CLIC1 HCG23 BTNL2 SAPCD1-AS1 HLA-DQB1 PSMB9 HSPA1A TAP1 CSNK2B RPS18 TNXB LY6G6C HCP5 ATP6V1G2 HLA-DQA1 HLA-DQA2 TAPBP HLA-DMA RNF5 LST1 MIR4646 LY6G6F HLA-DRB1 RXRB TNF LOC100294145 HSPA1B SNORD48 VPS52 STK19 MSH5-SAPCD1 C4A LOC101929163 HLA-DPA1 C6orf48 LY6G5B HLA-DQB2 SYNGAP1 MIR1236 ATF6B BAG6 MIR6833 PRRT1 MIR6834 MICB CUTA PBX2 APOM HLA-DRB6 GPANK1 C6orf25 ATP6V1G2-DDX39B ZBTB12 SNORD84 KIFC1 DXO FKBPL LOC100507547 TAP2 CYP21A2 NEU1 NFKBIL1 PSMB8 C6orf10 AGER MSH5 GPSM3 TNXA HCG26 LOC102725068 SNORD117 MIR6873 HLA-DOA SNORD52 HLA-DPB1 PPP1R2P1 ABHD16A HLA-DMB HCG25 PPT2-EGFL8 LY6G5C AGPAT1 MIR6721
dgv10465n54 Chr.6:31903977 - 31910331 on Build GRCh38 Loss C2
dgv10404n54 Chr.6:31312550 - 32516591 on Build GRCh38 Loss NOTCH4 CSNK2B TNXB SAPCD1 LY6G6C LTB HCP5 NCR3 ATP6V1G2 MICA HLA-B LTA RNF5 LST1 MIR4646 LY6G6F DDAH2 TNF HSPA1B VARS SNORD48 STK19 MSH5-SAPCD1 C2 C4A LOC101929163 LY6G6E MIR6832 C4B CFB C6orf48 SLC44A4 LY6G5B MIR1236 CYP21A1P ATF6B BAG6 AIF1 MIR6833 HLA-DRA PRRT1 SNORA38 C6orf47 MICB EGFL8 PBX2 EHMT2 APOM LOC100287329 GPANK1 C6orf25 ATP6V1G2-DDX39B MCCD1 HSPA1L ZBTB12 SNORD84 PPT2 LSM2 VWA7 DXO FKBPL LOC100507547 PRRC2A CYP21A2 DDX39B-AS1 NEU1 NFKBIL1 LY6G6D C6orf10 AGER MSH5 SKIV2L GPSM3 C2-AS1 TNXA HCG26 LOC102725068 DDX39B NELFE SNORD117 CLIC1 HCG23 SNORD52 BTNL2 SAPCD1-AS1 ABHD16A MIR6891 PPT2-EGFL8 LY6G5C HSPA1A AGPAT1 MIR6721
esv2658525 Chr.6:31903367 - 31911036 on Build GRCh38 Deletion C2
esv3608572 Chr.6:31903347 - 31910697 on Build GRCh38 Loss C2
dgv10463n54 Chr.6:31817661 - 32683279 on Build GRCh38 Loss NOTCH4 TNXB HLA-DQA1 RNF5 HLA-DRB1 HLA-DRB5 HSPA1B SNORD48 STK19 C2 C4A LOC101929163 C4B CFB C6orf48 SLC44A4 MIR1236 CYP21A1P ATF6B MIR6833 HLA-DRA PRRT1 EGFL8 PBX2 EHMT2 HLA-DRB6 ZBTB12 PPT2 DXO FKBPL LOC100507547 CYP21A2 NEU1 C6orf10 AGER SKIV2L GPSM3 C2-AS1 TNXA NELFE HLA-DQB1-AS1 HCG23 SNORD52 BTNL2 HLA-DQB1 PPT2-EGFL8 HSPA1A AGPAT1 MIR6721
nsv428141 Chr.6:31903735 - 32125066 on Build GRCh38 Gain+Loss C2 C4A C4B SKIV2L TNXB C2-AS1 CFB TNXA NELFE MIR1236 CYP21A1P ATF6B DXO CYP21A2 STK19
nsv1126749 Chr.6:31457323 - 32594423 on Build GRCh38 Deletion NOTCH4 CSNK2B TNXB SAPCD1 LY6G6C LTB HCP5 NCR3 ATP6V1G2 LTA RNF5 LST1 MIR4646 LY6G6F HLA-DRB1 HLA-DRB5 DDAH2 TNF HSPA1B VARS SNORD48 STK19 MSH5-SAPCD1 C2 C4A LOC101929163 LY6G6E MIR6832 C4B CFB C6orf48 SLC44A4 LY6G5B MIR1236 CYP21A1P ATF6B BAG6 AIF1 MIR6833 HLA-DRA PRRT1 SNORA38 C6orf47 MICB EGFL8 PBX2 EHMT2 APOM LOC100287329 HLA-DRB6 GPANK1 C6orf25 ATP6V1G2-DDX39B MCCD1 HSPA1L ZBTB12 SNORD84 PPT2 LSM2 VWA7 DXO FKBPL LOC100507547 PRRC2A CYP21A2 DDX39B-AS1 NEU1 NFKBIL1 LY6G6D C6orf10 AGER MSH5 SKIV2L GPSM3 C2-AS1 TNXA HCG26 LOC102725068 DDX39B NELFE SNORD117 CLIC1 HCG23 SNORD52 BTNL2 SAPCD1-AS1 ABHD16A PPT2-EGFL8 LY6G5C HSPA1A AGPAT1 MIR6721
esv2731824 Chr.6:31903427 - 31911207 on Build GRCh38 Deletion C2
nsv10823 Chr.6:31903219 - 31912449 on Build GRCh38 Loss C2
dgv10403n54 Chr.6:31312324 - 32049763 on Build GRCh38 Loss CSNK2B TNXB SAPCD1 LY6G6C LTB HCP5 NCR3 ATP6V1G2 MICA HLA-B LTA LST1 MIR4646 LY6G6F DDAH2 TNF HSPA1B VARS SNORD48 STK19 MSH5-SAPCD1 C2 C4A LY6G6E MIR6832 C4B CFB C6orf48 SLC44A4 LY6G5B MIR1236 CYP21A1P BAG6 AIF1 SNORA38 C6orf47 MICB EHMT2 APOM LOC100287329 GPANK1 C6orf25 ATP6V1G2-DDX39B MCCD1 HSPA1L ZBTB12 SNORD84 LSM2 VWA7 DXO PRRC2A CYP21A2 DDX39B-AS1 NEU1 NFKBIL1 LY6G6D MSH5 SKIV2L C2-AS1 TNXA HCG26 LOC102725068 DDX39B NELFE SNORD117 CLIC1 SNORD52 SAPCD1-AS1 ABHD16A MIR6891 LY6G5C HSPA1A
nsv1073969 Chr.6:31456422 - 33480523 on Build GRCh38 Deletion PHF1 NOTCH4 HSD17B8 SAPCD1 HCG24 LTB NCR3 LTA WDR46 PSMB8-AS1 HLA-DRB5 SLC39A7 DDAH2 VARS COL11A2 C2 LY6G6E MIR6832 C4B CFB SLC44A4 RGL2 CYP21A1P AIF1 HLA-DRA HLA-DPB2 BRD2 DAXX SNORA38 C6orf47 EGFL8 RING1 EHMT2 LOC100287329 HLA-DOB MIR3135B MCCD1 HSPA1L MIR219A1 MIR5004 PPT2 PFDN6 LSM2 VWA7 ZBTB9 PRRC2A B3GALT4 DDX39B-AS1 LY6G6D SKIV2L C2-AS1 ZBTB22 DDX39B NELFE HLA-DQB1-AS1 CLIC1 HCG23 BTNL2 SAPCD1-AS1 HLA-DQB1 PSMB9 HSPA1A TAP1 CSNK2B RPS18 TNXB LY6G6C HCP5 ATP6V1G2 HLA-DQA1 HLA-DQA2 TAPBP HLA-DMA RNF5 LST1 MIR4646 LY6G6F HLA-DRB1 RXRB TNF LOC100294145 HSPA1B SNORD48 VPS52 STK19 MSH5-SAPCD1 C4A LOC101929163 HLA-DPA1 C6orf48 LY6G5B HLA-DQB2 SYNGAP1 MIR1236 ATF6B BAG6 MIR6833 PRRT1 MIR6834 MICB CUTA PBX2 APOM HLA-DRB6 GPANK1 C6orf25 ATP6V1G2-DDX39B ZBTB12 SNORD84 KIFC1 DXO FKBPL LOC100507547 TAP2 CYP21A2 NEU1 NFKBIL1 PSMB8 C6orf10 AGER MSH5 GPSM3 TNXA HCG26 LOC102725068 SNORD117 MIR6873 HLA-DOA SNORD52 HLA-DPB1 PPP1R2P1 ABHD16A HLA-DMB HCG25 PPT2-EGFL8 LY6G5C AGPAT1 MIR6721
esv2422045 Chr.6:31903708 - 31910718 on Build GRCh38 Deletion C2
nsv509126 Chr.6:31861697 - 31934646 on Build GRCh38 Insertion C2 EHMT2 C2-AS1 SLC44A4 ZBTB12 NEU1

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