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See other C2 CNV Assays ›
Gene Symbol
C2
Assay Reference Genome
Location

Chr.6:31905976 on build GRCh38
Cytoband
6p21.33
Assay ID Hs03587028_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 717

Gene Name:

 complement component 2

Gene Aliases:

 ARMD14, CO2

Location:

 Chr.6:31897785-31945674 on Build GRCh38

Assay Gene Location:

 Within Intron 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
C2 NM_001178063.2 NP_001171534.1
NM_001282457.1 NP_001269386.1
AK096258.1
AK298311.1
AK298808.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv601960 Chr.6:31870664 - 31939370 on Build GRCh38 Loss ZBTB12 SLC44A4 C2-AS1 C2 EHMT2
nsv823505 Chr.6:31903462 - 31907392 on Build GRCh38 Loss C2
nsv1112900 Chr.6:31455323 - 33480423 on Build GRCh38 Deletion HLA-DPB1 HCG25 HCG26 LY6G5B C4B LY6G6C VPS52 VWA7 MIR6832 C4A HSPA1B ABHD16A STK19 SNORD48 FKBPL HLA-DOA MIR4646 HSPA1L SAPCD1-AS1 SYNGAP1 HLA-DMB C6orf10 SNORD52 HCG23 VARS CUTA SKIV2L B3GALT4 HSD17B8 DDAH2 PSMB8-AS1 PPT2-EGFL8 RNF5 MIR6721 ATF6B MIR5004 COL11A2 HLA-DQB2 CFB AGER DXO HLA-DQA2 C6orf47 MIR219A1 CYP21A1P NFKBIL1 HLA-DMA HLA-DRA PPT2 DDX39B-AS1 LOC100507547 ZBTB22 PFDN6 LTA LOC101929163 HLA-DQA1 LY6G6D LY6G5C LST1 TNXB APOM KIFC1 EGFL8 PRRT1 PSMB8 HLA-DRB5 LOC100287329 GPANK1 NEU1 HLA-DRB6 C6orf48 RING1 HSPA1A DAXX MSH5 BAG6 LOC102725068 MSH5-SAPCD1 HLA-DQB1 BRD2 HCP5 LTB C6orf25 LSM2 HLA-DOB HLA-DRB1 HLA-DQB1-AS1 HLA-DPA1 BTNL2 LOC100294145 ATP6V1G2-DDX39B MICB PSMB9 LY6G6F PRRC2A ZBTB9 ATP6V1G2 C2-AS1 C2 MIR6833 PPP1R2P1 MIR1236 AGPAT1 SNORD84 PBX2 HLA-DPB2 NOTCH4 TAP1 NELFE ZBTB12 SNORD117 TAP2 SAPCD1 CSNK2B NCR3 WDR46 TNF HCG24 CLIC1 MIR6873 AIF1 MIR6834 RXRB RPS18 GPSM3 SLC44A4 TNXA EHMT2 MIR3135B RGL2 TAPBP CYP21A2 PHF1 MCCD1 LY6G6E DDX39B SLC39A7 SNORA38
dgv10465n54 Chr.6:31903977 - 31910331 on Build GRCh38 Loss C2
dgv10404n54 Chr.6:31312550 - 32516591 on Build GRCh38 Loss C6orf48 HLA-B HCG26 LY6G5B HSPA1A C4B LY6G6C VWA7 MIR6832 C4A HSPA1B ABHD16A STK19 SNORD48 MSH5 BAG6 LOC102725068 FKBPL MSH5-SAPCD1 MIR4646 HSPA1L HCP5 LTB SAPCD1-AS1 C6orf25 MIR6891 LSM2 C6orf10 SNORD52 HCG23 VARS BTNL2 SKIV2L ATP6V1G2-DDX39B MICB LY6G6F MICA PRRC2A ATP6V1G2 DDAH2 C2-AS1 C2 MIR6833 MIR1236 PPT2-EGFL8 AGPAT1 SNORD84 RNF5 PBX2 MIR6721 ATF6B CFB NOTCH4 NELFE ZBTB12 SNORD117 AGER DXO SAPCD1 CSNK2B C6orf47 NCR3 CYP21A1P NFKBIL1 TNF HLA-DRA PPT2 CLIC1 AIF1 DDX39B-AS1 LOC100507547 LTA LOC101929163 LY6G6D LY6G5C GPSM3 SLC44A4 TNXA EHMT2 LST1 CYP21A2 TNXB APOM EGFL8 MCCD1 PRRT1 LOC100287329 LY6G6E GPANK1 DDX39B NEU1 SNORA38
esv2658525 Chr.6:31903367 - 31911036 on Build GRCh38 Deletion C2
esv3608572 Chr.6:31903347 - 31910697 on Build GRCh38 Loss C2
dgv10463n54 Chr.6:31817661 - 32683279 on Build GRCh38 Loss HLA-DRB6 C6orf48 HSPA1A C4B C4A HSPA1B STK19 SNORD48 FKBPL HLA-DQB1 C6orf10 SNORD52 HCG23 HLA-DRB1 HLA-DQB1-AS1 BTNL2 SKIV2L C2-AS1 C2 MIR6833 MIR1236 PPT2-EGFL8 AGPAT1 RNF5 PBX2 MIR6721 ATF6B CFB NOTCH4 NELFE ZBTB12 AGER DXO CYP21A1P HLA-DRA PPT2 LOC100507547 LOC101929163 HLA-DQA1 GPSM3 SLC44A4 TNXA EHMT2 CYP21A2 TNXB EGFL8 PRRT1 HLA-DRB5 NEU1
nsv428141 Chr.6:31903735 - 32125066 on Build GRCh38 Gain+Loss ATF6B CFB NELFE TNXA DXO C4B CYP21A2 CYP21A1P SKIV2L TNXB C4A STK19 C2-AS1 C2 MIR1236
nsv1126749 Chr.6:31457323 - 32594423 on Build GRCh38 Deletion HLA-DRB6 C6orf48 HCG26 LY6G5B HSPA1A C4B LY6G6C VWA7 MIR6832 C4A HSPA1B ABHD16A STK19 SNORD48 MSH5 BAG6 LOC102725068 FKBPL MSH5-SAPCD1 MIR4646 HSPA1L HCP5 LTB SAPCD1-AS1 C6orf25 LSM2 C6orf10 SNORD52 HCG23 HLA-DRB1 VARS BTNL2 SKIV2L ATP6V1G2-DDX39B MICB LY6G6F PRRC2A ATP6V1G2 DDAH2 C2-AS1 C2 MIR6833 MIR1236 PPT2-EGFL8 AGPAT1 SNORD84 RNF5 PBX2 MIR6721 ATF6B CFB NOTCH4 NELFE ZBTB12 SNORD117 AGER DXO SAPCD1 CSNK2B C6orf47 NCR3 CYP21A1P NFKBIL1 TNF HLA-DRA PPT2 CLIC1 AIF1 DDX39B-AS1 LOC100507547 LTA LOC101929163 LY6G6D LY6G5C GPSM3 SLC44A4 TNXA EHMT2 LST1 CYP21A2 TNXB APOM EGFL8 MCCD1 PRRT1 HLA-DRB5 LOC100287329 LY6G6E GPANK1 DDX39B NEU1 SNORA38
esv2731824 Chr.6:31903427 - 31911207 on Build GRCh38 Deletion C2
nsv10823 Chr.6:31903219 - 31912449 on Build GRCh38 Loss C2
dgv10403n54 Chr.6:31312324 - 32049763 on Build GRCh38 Loss C6orf48 HLA-B HCG26 LY6G5B HSPA1A C4B LY6G6C VWA7 MIR6832 C4A HSPA1B ABHD16A STK19 SNORD48 MSH5 BAG6 LOC102725068 MSH5-SAPCD1 MIR4646 HSPA1L HCP5 LTB SAPCD1-AS1 C6orf25 MIR6891 LSM2 SNORD52 VARS SKIV2L ATP6V1G2-DDX39B MICB LY6G6F MICA PRRC2A ATP6V1G2 DDAH2 C2-AS1 C2 MIR1236 SNORD84 CFB NELFE ZBTB12 SNORD117 DXO SAPCD1 CSNK2B C6orf47 NCR3 CYP21A1P NFKBIL1 TNF CLIC1 AIF1 DDX39B-AS1 LTA LY6G6D LY6G5C SLC44A4 TNXA EHMT2 LST1 CYP21A2 TNXB APOM MCCD1 LOC100287329 LY6G6E GPANK1 DDX39B NEU1 SNORA38
nsv1073969 Chr.6:31456422 - 33480523 on Build GRCh38 Deletion HLA-DPB1 HCG25 HCG26 LY6G5B C4B LY6G6C VPS52 VWA7 MIR6832 C4A HSPA1B ABHD16A STK19 SNORD48 FKBPL HLA-DOA MIR4646 HSPA1L SAPCD1-AS1 SYNGAP1 HLA-DMB C6orf10 SNORD52 HCG23 VARS CUTA SKIV2L B3GALT4 HSD17B8 DDAH2 PSMB8-AS1 PPT2-EGFL8 RNF5 MIR6721 ATF6B MIR5004 COL11A2 HLA-DQB2 CFB AGER DXO HLA-DQA2 C6orf47 MIR219A1 CYP21A1P NFKBIL1 HLA-DMA HLA-DRA PPT2 DDX39B-AS1 LOC100507547 ZBTB22 PFDN6 LTA LOC101929163 HLA-DQA1 LY6G6D LY6G5C LST1 TNXB APOM KIFC1 EGFL8 PRRT1 PSMB8 HLA-DRB5 LOC100287329 GPANK1 NEU1 HLA-DRB6 C6orf48 RING1 HSPA1A DAXX MSH5 BAG6 LOC102725068 MSH5-SAPCD1 HLA-DQB1 BRD2 HCP5 LTB C6orf25 LSM2 HLA-DOB HLA-DRB1 HLA-DQB1-AS1 HLA-DPA1 BTNL2 LOC100294145 ATP6V1G2-DDX39B MICB PSMB9 LY6G6F PRRC2A ZBTB9 ATP6V1G2 C2-AS1 C2 MIR6833 PPP1R2P1 MIR1236 AGPAT1 SNORD84 PBX2 HLA-DPB2 NOTCH4 TAP1 NELFE ZBTB12 SNORD117 TAP2 SAPCD1 CSNK2B NCR3 WDR46 TNF HCG24 CLIC1 MIR6873 AIF1 MIR6834 RXRB RPS18 GPSM3 SLC44A4 TNXA EHMT2 MIR3135B RGL2 TAPBP CYP21A2 PHF1 MCCD1 LY6G6E DDX39B SLC39A7 SNORA38
esv2422045 Chr.6:31903708 - 31910718 on Build GRCh38 Deletion C2
nsv509126 Chr.6:31861697 - 31934646 on Build GRCh38 Insertion ZBTB12 SLC44A4 C2-AS1 C2 EHMT2 NEU1

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