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Gene Symbol
PPT2-EGFL8
Assay Reference Genome
Location

Chr.6:32164025 on build GRCh38
Cytoband
6p21.32
Assay ID Hs03591432_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 100532746

Gene Name:

 PPT2-EGFL8 readthrough (NMD candidate)

Gene Aliases:

 -

Location:

 Chr.6:32153999-32168285 on Build GRCh38

Assay Gene Location:

 Within Intron 8
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PPT2-EGFL8 NR_037861.1
AB209572.1 BAD92809.1
AF020544.1 AAB80731.1
AK290473.1
AK296648.1
AK307427.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv830629 Chr.6:32076201 - 32222010 on Build GRCh38 Loss NOTCH4 AGER RNF5 PPT2 TNXB AGPAT1 GPSM3 MIR6833 ATF6B FKBPL PRRT1 EGFL8 LOC100507547 MIR6721 PPT2-EGFL8 PBX2
dgv10463n54 Chr.6:31817661 - 32683279 on Build GRCh38 Loss PPT2 HLA-DQB1-AS1 GPSM3 HLA-DRB1 C6orf10 SNORD52 C4B PRRT1 EGFL8 MIR1236 HLA-DRB5 NELFE TNXA C6orf48 C4A ZBTB12 FKBPL SNORD48 LOC100507547 SKIV2L NOTCH4 AGER STK19 BTNL2 SLC44A4 CYP21A1P TNXB AGPAT1 EHMT2 LOC101929163 HSPA1B RNF5 DXO C2 HLA-DRA CFB HLA-DQB1 MIR6833 ATF6B HLA-DQA1 HLA-DRB6 HSPA1A CYP21A2 NEU1 C2-AS1 HCG23 MIR6721 PPT2-EGFL8 PBX2
dgv10472n54 Chr.6:31985690 - 32812026 on Build GRCh38 Loss NOTCH4 AGER PPT2 BTNL2 HLA-DQB1-AS1 CYP21A1P TNXB AGPAT1 GPSM3 HLA-DQA2 HLA-DRB1 C6orf10 LOC101929163 C4B PRRT1 EGFL8 MIR3135B RNF5 HLA-DRB5 HLA-DQB2 TNXA HLA-DRA HLA-DQB1 C4A MIR6833 ATF6B HLA-DQA1 HLA-DRB6 FKBPL CYP21A2 LOC100507547 HCG23 MIR6721 PPT2-EGFL8 PBX2
esv2759415 Chr.6:31903735 - 32241336 on Build GRCh38 Gain+Loss NOTCH4 AGER PPT2 STK19 CYP21A1P TNXB AGPAT1 GPSM3 C4B PRRT1 EGFL8 MIR1236 RNF5 DXO NELFE C2 TNXA CFB C4A MIR6833 ATF6B FKBPL CYP21A2 LOC100507547 C2-AS1 MIR6721 PPT2-EGFL8 SKIV2L PBX2
nsv1126749 Chr.6:31457323 - 32594423 on Build GRCh38 Deletion C6orf25 PPT2 TNF HCP5 NCR3 LY6G5B GPSM3 HLA-DRB1 C6orf10 LTA C6orf47 SNORD52 C4B PRRT1 EGFL8 CSNK2B LY6G6C SNORA38 APOM VWA7 MIR1236 BAG6 HLA-DRB5 NELFE LY6G6E TNXA LY6G6D ATP6V1G2 C6orf48 C4A LY6G6F ZBTB12 LOC100287329 NFKBIL1 FKBPL SNORD48 SAPCD1-AS1 DDX39B LY6G5C HCG26 HSPA1L LOC100507547 LSM2 AIF1 SKIV2L MIR4646 LST1 NOTCH4 AGER GPANK1 MCCD1 ABHD16A STK19 BTNL2 SLC44A4 CYP21A1P TNXB AGPAT1 DDAH2 MIR6832 DDX39B-AS1 EHMT2 LOC101929163 HSPA1B MSH5 VARS LTB PRRC2A MSH5-SAPCD1 RNF5 DXO SNORD117 LOC102725068 SNORD84 C2 HLA-DRA CFB MIR6833 ATF6B SAPCD1 HLA-DRB6 HSPA1A MICB CYP21A2 CLIC1 NEU1 ATP6V1G2-DDX39B C2-AS1 HCG23 MIR6721 PPT2-EGFL8 PBX2
nsv1073969 Chr.6:31456422 - 33480523 on Build GRCh38 Deletion HCG25 PPT2 MIR6873 CUTA GPSM3 HLA-DQA2 TAP1 HLA-DRB1 C6orf10 C6orf47 SNORD52 CSNK2B LY6G6C PSMB8-AS1 SNORA38 MIR3135B VWA7 RXRB MIR1236 COL11A2 RPS18 TNXA LY6G6D C6orf48 HLA-DOB C4A ZBTB12 SAPCD1-AS1 LOC100507547 LSM2 LST1 GPANK1 ABHD16A STK19 BTNL2 SLC44A4 CYP21A1P TNXB HLA-DPA1 HCG24 DDAH2 MIR6832 EHMT2 MSH5 VARS MIR219A1 WDR46 PRRC2A MSH5-SAPCD1 RGL2 DXO SNORD117 LOC102725068 SNORD84 CFB MIR6833 SAPCD1 HLA-DQA1 HLA-DRB6 HSPA1A MICB MIR6834 CYP21A2 HSD17B8 NEU1 ATP6V1G2-DDX39B C2-AS1 HCG23 ZBTB9 SYNGAP1 TAP2 C6orf25 TNF HCP5 NCR3 LY6G5B HLA-DQB1-AS1 HLA-DPB1 HLA-DPB2 TAPBP DAXX LTA C4B PRRT1 EGFL8 APOM BAG6 HLA-DRB5 NELFE LY6G6E LOC100294145 ATP6V1G2 LY6G6F LOC100287329 NFKBIL1 FKBPL SNORD48 DDX39B LY6G5C HCG26 HSPA1L AIF1 SKIV2L MIR4646 NOTCH4 AGER MCCD1 PPP1R2P1 HLA-DOA AGPAT1 MIR5004 RING1 DDX39B-AS1 ZBTB22 LOC101929163 HSPA1B PSMB9 SLC39A7 PSMB8 LTB PHF1 BRD2 HLA-DMB RNF5 HLA-DQB2 C2 HLA-DRA HLA-DQB1 ATF6B PFDN6 B3GALT4 HLA-DMA VPS52 CLIC1 MIR6721 KIFC1 PPT2-EGFL8 PBX2
nsv602104 Chr.6:32096949 - 32203906 on Build GRCh38 Loss NOTCH4 AGER RNF5 PPT2 TNXB AGPAT1 GPSM3 MIR6833 ATF6B FKBPL PRRT1 EGFL8 LOC100507547 MIR6721 PPT2-EGFL8 PBX2
nsv1112900 Chr.6:31455323 - 33480423 on Build GRCh38 Deletion HCG25 PPT2 MIR6873 CUTA GPSM3 HLA-DQA2 TAP1 HLA-DRB1 C6orf10 C6orf47 SNORD52 CSNK2B LY6G6C PSMB8-AS1 SNORA38 MIR3135B VWA7 RXRB MIR1236 COL11A2 RPS18 TNXA LY6G6D C6orf48 HLA-DOB C4A ZBTB12 SAPCD1-AS1 LOC100507547 LSM2 LST1 GPANK1 ABHD16A STK19 BTNL2 SLC44A4 CYP21A1P TNXB HLA-DPA1 HCG24 DDAH2 MIR6832 EHMT2 MSH5 VARS MIR219A1 WDR46 PRRC2A MSH5-SAPCD1 RGL2 DXO SNORD117 LOC102725068 SNORD84 CFB MIR6833 SAPCD1 HLA-DQA1 HLA-DRB6 HSPA1A MICB MIR6834 CYP21A2 HSD17B8 NEU1 ATP6V1G2-DDX39B C2-AS1 HCG23 ZBTB9 SYNGAP1 TAP2 C6orf25 TNF HCP5 NCR3 LY6G5B HLA-DQB1-AS1 HLA-DPB1 HLA-DPB2 TAPBP DAXX LTA C4B PRRT1 EGFL8 APOM BAG6 HLA-DRB5 NELFE LY6G6E LOC100294145 ATP6V1G2 LY6G6F LOC100287329 NFKBIL1 FKBPL SNORD48 DDX39B LY6G5C HCG26 HSPA1L AIF1 SKIV2L MIR4646 NOTCH4 AGER MCCD1 PPP1R2P1 HLA-DOA AGPAT1 MIR5004 RING1 DDX39B-AS1 ZBTB22 LOC101929163 HSPA1B PSMB9 SLC39A7 PSMB8 LTB PHF1 BRD2 HLA-DMB RNF5 HLA-DQB2 C2 HLA-DRA HLA-DQB1 ATF6B PFDN6 B3GALT4 HLA-DMA VPS52 CLIC1 MIR6721 KIFC1 PPT2-EGFL8 PBX2
dgv10404n54 Chr.6:31312550 - 32516591 on Build GRCh38 Loss C6orf25 PPT2 TNF HCP5 NCR3 LY6G5B GPSM3 C6orf10 LTA C6orf47 SNORD52 C4B PRRT1 EGFL8 CSNK2B LY6G6C SNORA38 MIR6891 APOM VWA7 MIR1236 BAG6 NELFE LY6G6E HLA-B TNXA LY6G6D ATP6V1G2 MICA C6orf48 C4A LY6G6F ZBTB12 LOC100287329 NFKBIL1 FKBPL SNORD48 SAPCD1-AS1 DDX39B LY6G5C HCG26 HSPA1L LOC100507547 LSM2 AIF1 SKIV2L MIR4646 LST1 NOTCH4 AGER GPANK1 MCCD1 ABHD16A STK19 BTNL2 SLC44A4 CYP21A1P TNXB AGPAT1 DDAH2 MIR6832 DDX39B-AS1 EHMT2 LOC101929163 HSPA1B MSH5 VARS LTB PRRC2A MSH5-SAPCD1 RNF5 DXO SNORD117 LOC102725068 SNORD84 C2 HLA-DRA CFB MIR6833 ATF6B SAPCD1 HSPA1A MICB CYP21A2 CLIC1 NEU1 ATP6V1G2-DDX39B C2-AS1 HCG23 MIR6721 PPT2-EGFL8 PBX2

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:


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