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See other PPT2 CNV Assays ›
Gene Symbol
PPT2
Assay Reference Genome
Location

Chr.6:32156034 on build GRCh38
Cytoband
6p21.32
Assay ID Hs03591453_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 9374

Gene Name:

 palmitoyl-protein thioesterase 2

Gene Aliases:

 C6orf8, G14, PPT-2

Location:

 Chr.6:32153452-32163681 on Build GRCh38

Assay Gene Location:

 Within Intron 6
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PPT2 NM_001204103.1 NP_001191032.1
NM_005155.6 NP_005146.4
NM_138717.2 NP_619731.2
AF020543.1 AAB80730.1
AL110128.1 CAB53659.1
BC001355.2 AAH01355.1
CR533546.1 CAG38577.1
Y17958.1 CAB46981.1

Target Gene Details

Entrez Gene ID:

 100532746

Gene Name:

 PPT2-EGFL8 readthrough (NMD candidate)

Gene Aliases:

 -

Location:

 Chr.6:32153999-32168285 on Build GRCh38

Assay Gene Location:

 Within Intron 5
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PPT2-EGFL8 NR_037861.1
AB209572.1 BAD92809.1
AF020544.1 AAB80731.1
AK290473.1
AK296648.1
AK307427.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv830629 Chr.6:32076201 - 32222010 on Build GRCh38 Loss AGER MIR6833 PPT2-EGFL8 GPSM3 PPT2 FKBPL PRRT1 AGPAT1 NOTCH4 TNXB ATF6B RNF5 LOC100507547 EGFL8 PBX2 MIR6721
dgv10472n54 Chr.6:31985690 - 32812026 on Build GRCh38 Loss MIR3135B GPSM3 FKBPL PRRT1 HLA-DRB1 CYP21A1P HLA-DRA TNXB RNF5 PBX2 C6orf10 HLA-DRB6 MIR6721 LOC101929163 HLA-DQB1 AGER MIR6833 PPT2-EGFL8 PPT2 HLA-DQA1 AGPAT1 C4B HLA-DQB1-AS1 HLA-DQA2 NOTCH4 C4A HLA-DQB2 HCG23 ATF6B LOC100507547 BTNL2 EGFL8 HLA-DRB5 TNXA CYP21A2
dgv10463n54 Chr.6:31817661 - 32683279 on Build GRCh38 Loss C2-AS1 STK19 GPSM3 RNF5 PBX2 HSPA1A HLA-DQB1 C2 AGER MIR6833 AGPAT1 C4B NOTCH4 HCG23 SKIV2L ATF6B MIR1236 BTNL2 SLC44A4 DXO FKBPL PRRT1 CFB HLA-DRB1 CYP21A1P HLA-DRA SNORD48 TNXB NEU1 ZBTB12 C6orf10 HLA-DRB6 MIR6721 NELFE LOC101929163 EHMT2 PPT2-EGFL8 C6orf48 PPT2 HLA-DQA1 HLA-DQB1-AS1 SNORD52 HSPA1B C4A LOC100507547 EGFL8 HLA-DRB5 TNXA CYP21A2
esv2759415 Chr.6:31903735 - 32241336 on Build GRCh38 Gain+Loss C2-AS1 DXO STK19 GPSM3 FKBPL PRRT1 CFB CYP21A1P TNXB RNF5 PBX2 MIR6721 NELFE C2 AGER MIR6833 PPT2-EGFL8 PPT2 AGPAT1 C4B NOTCH4 C4A SKIV2L ATF6B LOC100507547 MIR1236 EGFL8 TNXA CYP21A2
nsv1126749 Chr.6:31457323 - 32594423 on Build GRCh38 Deletion C2-AS1 LOC102725068 STK19 GPSM3 NCR3 LTA RNF5 PBX2 CSNK2B LY6G6C HSPA1A C2 AGER VWA7 MIR6833 MIR4646 HSPA1L AGPAT1 C4B C6orf47 ABHD16A NOTCH4 HCG23 SKIV2L ATF6B DDAH2 MIR1236 BTNL2 MIR6832 VARS SLC44A4 SNORA38 LTB LY6G6F DXO LST1 FKBPL SAPCD1 PRRT1 CFB HLA-DRB1 CYP21A1P HLA-DRA SNORD48 C6orf25 TNXB TNF NEU1 APOM SAPCD1-AS1 ZBTB12 BAG6 C6orf10 HLA-DRB6 MIR6721 NELFE LOC101929163 LY6G6E LY6G5C CLIC1 SNORD84 EHMT2 HCP5 ATP6V1G2-DDX39B MSH5-SAPCD1 PPT2-EGFL8 DDX39B C6orf48 PPT2 LOC100287329 HCG26 LY6G5B SNORD52 HSPA1B LSM2 C4A DDX39B-AS1 PRRC2A SNORD117 LOC100507547 MCCD1 AIF1 EGFL8 NFKBIL1 MSH5 HLA-DRB5 ATP6V1G2 LY6G6D TNXA MICB GPANK1 CYP21A2
nsv1073969 Chr.6:31456422 - 33480523 on Build GRCh38 Deletion C2-AS1 KIFC1 GPSM3 PPP1R2P1 RXRB CSNK2B RPS18 LY6G6C HSPA1A HLA-DQB1 MIR6833 MIR5004 MIR4646 C4B C6orf47 VPS52 ABHD16A HLA-DQA2 NOTCH4 BRD2 HCG23 BTNL2 VARS MIR6873 HSD17B8 HLA-DPB1 FKBPL SAPCD1 CFB CYP21A1P C6orf25 TNXB ZBTB9 LOC100294145 NEU1 APOM SAPCD1-AS1 ZBTB12 C6orf10 HLA-DRB6 MIR6721 LOC101929163 SNORD84 MIR219A1 HCP5 PPT2-EGFL8 TAPBP DDX39B HLA-DQA1 HCG26 B3GALT4 PFDN6 LY6G5B SNORD52 HSPA1B HLA-DMA DDX39B-AS1 SNORD117 MCCD1 CUTA HCG25 AIF1 EGFL8 NFKBIL1 MSH5 LY6G6D MICB GPANK1 HLA-DPB2 CYP21A2 PSMB9 LOC102725068 STK19 WDR46 NCR3 LTA RNF5 PBX2 C2 PSMB8 AGER VWA7 RING1 MIR6834 TAP1 HSPA1L HLA-DOA HLA-DMB AGPAT1 HLA-DOB HCG24 ZBTB22 HLA-DPA1 SKIV2L ATF6B DDAH2 MIR1236 DAXX MIR6832 SLC44A4 SNORA38 LTB COL11A2 PSMB8-AS1 LY6G6F DXO MIR3135B LST1 PRRT1 HLA-DRB1 PHF1 HLA-DRA TAP2 SNORD48 TNF BAG6 NELFE LY6G6E LY6G5C CLIC1 EHMT2 ATP6V1G2-DDX39B MSH5-SAPCD1 C6orf48 PPT2 LOC100287329 SLC39A7 RGL2 HLA-DQB1-AS1 LSM2 C4A HLA-DQB2 PRRC2A LOC100507547 SYNGAP1 HLA-DRB5 ATP6V1G2 TNXA
nsv602104 Chr.6:32096949 - 32203906 on Build GRCh38 Loss AGER MIR6833 PPT2-EGFL8 GPSM3 PPT2 FKBPL PRRT1 AGPAT1 NOTCH4 TNXB ATF6B RNF5 LOC100507547 EGFL8 PBX2 MIR6721
nsv1112900 Chr.6:31455323 - 33480423 on Build GRCh38 Deletion C2-AS1 KIFC1 GPSM3 PPP1R2P1 RXRB CSNK2B RPS18 LY6G6C HSPA1A HLA-DQB1 MIR6833 MIR5004 MIR4646 C4B C6orf47 VPS52 ABHD16A HLA-DQA2 NOTCH4 BRD2 HCG23 BTNL2 VARS MIR6873 HSD17B8 HLA-DPB1 FKBPL SAPCD1 CFB CYP21A1P C6orf25 TNXB ZBTB9 LOC100294145 NEU1 APOM SAPCD1-AS1 ZBTB12 C6orf10 HLA-DRB6 MIR6721 LOC101929163 SNORD84 MIR219A1 HCP5 PPT2-EGFL8 TAPBP DDX39B HLA-DQA1 HCG26 B3GALT4 PFDN6 LY6G5B SNORD52 HSPA1B HLA-DMA DDX39B-AS1 SNORD117 MCCD1 CUTA HCG25 AIF1 EGFL8 NFKBIL1 MSH5 LY6G6D MICB GPANK1 HLA-DPB2 CYP21A2 PSMB9 LOC102725068 STK19 WDR46 NCR3 LTA RNF5 PBX2 C2 PSMB8 AGER VWA7 RING1 MIR6834 TAP1 HSPA1L HLA-DOA HLA-DMB AGPAT1 HLA-DOB HCG24 ZBTB22 HLA-DPA1 SKIV2L ATF6B DDAH2 MIR1236 DAXX MIR6832 SLC44A4 SNORA38 LTB COL11A2 PSMB8-AS1 LY6G6F DXO MIR3135B LST1 PRRT1 HLA-DRB1 PHF1 HLA-DRA TAP2 SNORD48 TNF BAG6 NELFE LY6G6E LY6G5C CLIC1 EHMT2 ATP6V1G2-DDX39B MSH5-SAPCD1 C6orf48 PPT2 LOC100287329 SLC39A7 RGL2 HLA-DQB1-AS1 LSM2 C4A HLA-DQB2 PRRC2A LOC100507547 SYNGAP1 HLA-DRB5 ATP6V1G2 TNXA
dgv10404n54 Chr.6:31312550 - 32516591 on Build GRCh38 Loss C2-AS1 LOC102725068 STK19 GPSM3 NCR3 LTA RNF5 PBX2 CSNK2B LY6G6C HSPA1A MICA C2 MIR6891 AGER VWA7 MIR6833 MIR4646 HSPA1L AGPAT1 C4B C6orf47 ABHD16A NOTCH4 HCG23 SKIV2L ATF6B DDAH2 MIR1236 BTNL2 MIR6832 VARS SLC44A4 SNORA38 LTB LY6G6F DXO LST1 FKBPL SAPCD1 PRRT1 CFB HLA-B CYP21A1P HLA-DRA SNORD48 C6orf25 TNXB TNF NEU1 APOM SAPCD1-AS1 ZBTB12 BAG6 C6orf10 MIR6721 NELFE LOC101929163 LY6G6E LY6G5C CLIC1 SNORD84 EHMT2 HCP5 ATP6V1G2-DDX39B MSH5-SAPCD1 PPT2-EGFL8 DDX39B C6orf48 PPT2 LOC100287329 HCG26 LY6G5B SNORD52 HSPA1B LSM2 C4A DDX39B-AS1 PRRC2A SNORD117 LOC100507547 MCCD1 AIF1 EGFL8 NFKBIL1 MSH5 ATP6V1G2 LY6G6D TNXA MICB GPANK1 CYP21A2

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