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See other C2 CNV Assays ›
Gene Symbol
C2
Assay Reference Genome
Location

Chr.6:31902714 on build GRCh38
Cytoband
6p21.33
Assay ID Hs03599683_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 717

Gene Name:

 complement component 2

Gene Aliases:

 ARMD14, CO2

Location:

 Chr.6:31897785-31945674 on Build GRCh38

Assay Gene Location:

 Within Intron 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
C2 NM_001178063.2 NP_001171534.1
NM_001282457.1 NP_001269386.1
AK096258.1
AK298311.1
AK298808.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv10822 Chr.6:31898992 - 31903913 on Build GRCh38 Gain ZBTB12 C2
dgv10463n54 Chr.6:31817661 - 32683279 on Build GRCh38 Loss FKBPL AGER PPT2 SKIV2L MIR6721 HLA-DQB1 C2-AS1 NOTCH4 TNXA HSPA1A C6orf48 PRRT1 STK19 ZBTB12 BTNL2 HLA-DRB5 HLA-DQA1 C4B ATF6B C6orf10 SNORD52 LOC101929163 HSPA1B TNXB CYP21A1P CFB PPT2-EGFL8 HLA-DRB6 RNF5 SNORD48 HCG23 CYP21A2 MIR1236 NEU1 PBX2 NELFE HLA-DQB1-AS1 DXO AGPAT1 SLC44A4 MIR6833 EGFL8 GPSM3 C2 HLA-DRA LOC100507547 C4A HLA-DRB1 EHMT2
nsv1126749 Chr.6:31457323 - 32594423 on Build GRCh38 Deletion LY6G5B FKBPL AGER SNORD117 SAPCD1 LOC102725068 PPT2 SKIV2L MIR6721 CSNK2B LST1 ATP6V1G2 C2-AS1 NOTCH4 PRRC2A GPANK1 LOC100287329 MCCD1 TNXA MICB DDAH2 NCR3 ATP6V1G2-DDX39B VARS VWA7 HCG26 SNORD84 HSPA1A C6orf48 PRRT1 MSH5-SAPCD1 SAPCD1-AS1 STK19 ZBTB12 BTNL2 SNORA38 LY6G6C MSH5 HLA-DRB5 C4B ATF6B C6orf10 SNORD52 LOC101929163 TNF HSPA1L DDX39B-AS1 HSPA1B TNXB CYP21A1P C6orf47 CFB PPT2-EGFL8 CLIC1 HLA-DRB6 RNF5 DDX39B SNORD48 ABHD16A NFKBIL1 HCG23 CYP21A2 BAG6 MIR1236 NEU1 LTB PBX2 NELFE LY6G6F MIR6832 C6orf25 LTA DXO AGPAT1 SLC44A4 MIR6833 HCP5 EGFL8 AIF1 APOM LY6G6D GPSM3 C2 HLA-DRA LSM2 LY6G6E MIR4646 LOC100507547 C4A LY6G5C HLA-DRB1 EHMT2
nsv601960 Chr.6:31870664 - 31939370 on Build GRCh38 Loss ZBTB12 C2 EHMT2 SLC44A4 C2-AS1
dgv10403n54 Chr.6:31312324 - 32049763 on Build GRCh38 Loss LY6G5B SNORD117 MICA SAPCD1 LOC102725068 SKIV2L CSNK2B LST1 ATP6V1G2 C2-AS1 PRRC2A GPANK1 LOC100287329 MCCD1 TNXA MICB DDAH2 NCR3 ATP6V1G2-DDX39B VARS VWA7 HCG26 SNORD84 HSPA1A C6orf48 MSH5-SAPCD1 SAPCD1-AS1 STK19 MIR6891 ZBTB12 SNORA38 LY6G6C MSH5 C4B SNORD52 TNF HSPA1L DDX39B-AS1 HSPA1B TNXB CYP21A1P C6orf47 CFB CLIC1 DDX39B SNORD48 ABHD16A NFKBIL1 CYP21A2 BAG6 MIR1236 NEU1 LTB NELFE LY6G6F MIR6832 C6orf25 LTA DXO SLC44A4 HCP5 AIF1 APOM LY6G6D C2 LSM2 LY6G6E MIR4646 C4A LY6G5C HLA-B EHMT2
nsv1073969 Chr.6:31456422 - 33480523 on Build GRCh38 Deletion LY6G5B MIR6834 TAP1 RGL2 PPT2 SKIV2L MIR6721 CSNK2B HLA-DQB1 LST1 CUTA ATP6V1G2 HCG25 NOTCH4 PRRC2A LOC100287329 PFDN6 TNXA DDAH2 VARS VWA7 HCG26 PHF1 MIR6873 SNORD84 PSMB8 HSPA1A C6orf48 PRRT1 PSMB8-AS1 MSH5-SAPCD1 ZBTB12 HLA-DOA BTNL2 SNORA38 LY6G6C HLA-DRB5 HLA-DQA1 C4B C6orf10 LOC101929163 TNF TAP2 HLA-DPB2 DDX39B-AS1 TNXB CFB CLIC1 HLA-DRB6 DDX39B SNORD48 NFKBIL1 HCG23 CYP21A2 BAG6 MIR1236 ZBTB9 RING1 WDR46 HLA-DQB2 HLA-DMA ZBTB22 MIR6832 LTA KIFC1 COL11A2 MIR6833 HCP5 EGFL8 AIF1 GPSM3 LSM2 LY6G6E MIR4646 C4A LY6G5C HLA-DPB1 HLA-DRB1 EHMT2 FKBPL AGER RPS18 HLA-DPA1 MIR219A1 SNORD117 SAPCD1 LOC102725068 HLA-DMB C2-AS1 LOC100294145 GPANK1 MCCD1 MICB BRD2 NCR3 ATP6V1G2-DDX39B TAPBP SAPCD1-AS1 HSD17B8 STK19 MIR3135B MSH5 ATF6B SNORD52 PSMB9 HSPA1L VPS52 RXRB HSPA1B CYP21A1P C6orf47 PPT2-EGFL8 RNF5 B3GALT4 MIR5004 ABHD16A SYNGAP1 NEU1 LTB PBX2 NELFE HLA-DQB1-AS1 HLA-DQA2 HLA-DOB LY6G6F C6orf25 SLC39A7 DXO AGPAT1 SLC44A4 PPP1R2P1 APOM LY6G6D C2 HLA-DRA DAXX LOC100507547 HCG24
nsv1112900 Chr.6:31455323 - 33480423 on Build GRCh38 Deletion LY6G5B MIR6834 TAP1 RGL2 PPT2 SKIV2L MIR6721 CSNK2B HLA-DQB1 LST1 CUTA ATP6V1G2 HCG25 NOTCH4 PRRC2A LOC100287329 PFDN6 TNXA DDAH2 VARS VWA7 HCG26 PHF1 MIR6873 SNORD84 PSMB8 HSPA1A C6orf48 PRRT1 PSMB8-AS1 MSH5-SAPCD1 ZBTB12 HLA-DOA BTNL2 SNORA38 LY6G6C HLA-DRB5 HLA-DQA1 C4B C6orf10 LOC101929163 TNF TAP2 HLA-DPB2 DDX39B-AS1 TNXB CFB CLIC1 HLA-DRB6 DDX39B SNORD48 NFKBIL1 HCG23 CYP21A2 BAG6 MIR1236 ZBTB9 RING1 WDR46 HLA-DQB2 HLA-DMA ZBTB22 MIR6832 LTA KIFC1 COL11A2 MIR6833 HCP5 EGFL8 AIF1 GPSM3 LSM2 LY6G6E MIR4646 C4A LY6G5C HLA-DPB1 HLA-DRB1 EHMT2 FKBPL AGER RPS18 HLA-DPA1 MIR219A1 SNORD117 SAPCD1 LOC102725068 HLA-DMB C2-AS1 LOC100294145 GPANK1 MCCD1 MICB BRD2 NCR3 ATP6V1G2-DDX39B TAPBP SAPCD1-AS1 HSD17B8 STK19 MIR3135B MSH5 ATF6B SNORD52 PSMB9 HSPA1L VPS52 RXRB HSPA1B CYP21A1P C6orf47 PPT2-EGFL8 RNF5 B3GALT4 MIR5004 ABHD16A SYNGAP1 NEU1 LTB PBX2 NELFE HLA-DQB1-AS1 HLA-DQA2 HLA-DOB LY6G6F C6orf25 SLC39A7 DXO AGPAT1 SLC44A4 PPP1R2P1 APOM LY6G6D C2 HLA-DRA DAXX LOC100507547 HCG24
dgv10404n54 Chr.6:31312550 - 32516591 on Build GRCh38 Loss LY6G5B FKBPL AGER SNORD117 MICA SAPCD1 LOC102725068 PPT2 SKIV2L MIR6721 CSNK2B LST1 ATP6V1G2 C2-AS1 NOTCH4 PRRC2A GPANK1 LOC100287329 MCCD1 TNXA MICB DDAH2 NCR3 ATP6V1G2-DDX39B VARS VWA7 HCG26 SNORD84 HSPA1A C6orf48 PRRT1 MSH5-SAPCD1 SAPCD1-AS1 STK19 MIR6891 ZBTB12 BTNL2 SNORA38 LY6G6C MSH5 C4B ATF6B C6orf10 SNORD52 LOC101929163 TNF HSPA1L DDX39B-AS1 HSPA1B TNXB CYP21A1P C6orf47 CFB PPT2-EGFL8 CLIC1 RNF5 DDX39B SNORD48 ABHD16A NFKBIL1 HCG23 CYP21A2 BAG6 MIR1236 NEU1 LTB PBX2 NELFE LY6G6F MIR6832 C6orf25 LTA DXO AGPAT1 SLC44A4 MIR6833 HCP5 EGFL8 AIF1 APOM LY6G6D GPSM3 C2 HLA-DRA LSM2 LY6G6E MIR4646 LOC100507547 C4A LY6G5C HLA-B EHMT2
nsv509126 Chr.6:31861697 - 31934646 on Build GRCh38 Insertion ZBTB12 C2 NEU1 EHMT2 SLC44A4 C2-AS1

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