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See other PPT2 CNV Assays ›
Gene Symbol
PPT2
Assay Reference Genome
Location

Chr.6:32155283 on build GRCh38
Cytoband
6p21.32
Assay ID Hs03603496_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 9374

Gene Name:

 palmitoyl-protein thioesterase 2

Gene Aliases:

 C6orf8, G14, PPT-2

Location:

 Chr.6:32153452-32163681 on Build GRCh38

Assay Gene Location:

 Within Intron 4
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PPT2 NM_001204103.1 NP_001191032.1
NM_005155.6 NP_005146.4
NM_138717.2 NP_619731.2
AF020543.1 AAB80730.1
AL110128.1 CAB53659.1
BC001355.2 AAH01355.1
CR533546.1 CAG38577.1
Y17958.1 CAB46981.1

Target Gene Details

Entrez Gene ID:

 100532746

Gene Name:

 PPT2-EGFL8 readthrough (NMD candidate)

Gene Aliases:

 -

Location:

 Chr.6:32153999-32168285 on Build GRCh38

Assay Gene Location:

 Within Intron 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PPT2-EGFL8 NR_037861.1
AB209572.1 BAD92809.1
AF020544.1 AAB80731.1
AK290473.1
AK296648.1
AK307427.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv830629 Chr.6:32076201 - 32222010 on Build GRCh38 Loss PPT2-EGFL8 PPT2 ATF6B RNF5 GPSM3 FKBPL MIR6833 AGER PRRT1 TNXB MIR6721 AGPAT1 LOC100507547 PBX2 NOTCH4 EGFL8
dgv10463n54 Chr.6:31817661 - 32683279 on Build GRCh38 Loss C2 HSPA1B STK19 HLA-DRB1 C4A MIR6833 CFB HLA-DRB6 HLA-DRA MIR6721 PBX2 PPT2-EGFL8 ATF6B SKIV2L BTNL2 FKBPL C6orf10 AGER HLA-DQB1-AS1 TNXA DXO SNORD48 AGPAT1 CYP21A1P C2-AS1 NEU1 MIR1236 RNF5 HSPA1A GPSM3 PRRT1 SLC44A4 LOC101929163 CYP21A2 SNORD52 PPT2 HLA-DQA1 HLA-DQB1 ZBTB12 TNXB HLA-DRB5 C6orf48 HCG23 C4B EHMT2 NELFE LOC100507547 NOTCH4 EGFL8
dgv10472n54 Chr.6:31985690 - 32812026 on Build GRCh38 Loss HLA-DRB1 RNF5 HLA-DQB2 C4A GPSM3 MIR6833 PRRT1 LOC101929163 MIR3135B CYP21A2 HLA-DRB6 HLA-DRA MIR6721 PBX2 PPT2-EGFL8 PPT2 ATF6B HLA-DQA1 HLA-DQA2 BTNL2 FKBPL C6orf10 HLA-DQB1 AGER HLA-DQB1-AS1 TNXA TNXB HLA-DRB5 HCG23 C4B AGPAT1 LOC100507547 CYP21A1P NOTCH4 EGFL8
esv2759415 Chr.6:31903735 - 32241336 on Build GRCh38 Gain+Loss C2-AS1 C2 STK19 MIR1236 RNF5 C4A GPSM3 MIR6833 CFB PRRT1 CYP21A2 MIR6721 PBX2 PPT2-EGFL8 PPT2 ATF6B SKIV2L FKBPL AGER TNXA TNXB C4B DXO NELFE AGPAT1 LOC100507547 CYP21A1P NOTCH4 EGFL8
nsv1126749 Chr.6:31457323 - 32594423 on Build GRCh38 Deletion C2 HSPA1B STK19 HLA-DRB1 C4A NFKBIL1 MIR6833 CFB MCCD1 LTA VARS DDX39B-AS1 NCR3 LOC102725068 HLA-DRB6 ATP6V1G2-DDX39B HLA-DRA MSH5 MIR6721 APOM LOC100287329 PBX2 SNORD117 PPT2-EGFL8 ATF6B SKIV2L BTNL2 FKBPL C6orf10 LY6G5B AGER CSNK2B DDX39B TNXA HCP5 LST1 DDAH2 MIR4646 DXO SNORD48 AGPAT1 CYP21A1P ABHD16A LY6G6C C2-AS1 NEU1 SAPCD1-AS1 MIR1236 ATP6V1G2 RNF5 HSPA1A PRRC2A GPSM3 VWA7 MICB C6orf47 PRRT1 BAG6 C6orf25 LY6G6E SLC44A4 LOC101929163 LY6G5C LY6G6D CYP21A2 SNORD52 SAPCD1 LTB PPT2 LSM2 AIF1 HSPA1L SNORD84 LY6G6F ZBTB12 MIR6832 CLIC1 TNXB GPANK1 HLA-DRB5 C6orf48 HCG23 C4B EHMT2 NELFE LOC100507547 HCG26 NOTCH4 MSH5-SAPCD1 SNORA38 TNF EGFL8
nsv1073969 Chr.6:31456422 - 33480523 on Build GRCh38 Deletion C2 TAP2 STK19 MIR5004 MIR6833 CFB LTA BRD2 HLA-DMA DDX39B-AS1 RPS18 NCR3 PHF1 HLA-DRB6 HLA-DRA PPP1R2P1 MIR6721 PBX2 SNORD117 ATF6B SKIV2L ZBTB9 FKBPL C6orf10 LY6G5B MIR6834 AGER CSNK2B HLA-DQB1-AS1 TNXA LST1 DXO SNORD48 MIR6873 CYP21A1P MIR219A1 LY6G6C SYNGAP1 HLA-DOA MIR1236 RNF5 VWA7 MICB BAG6 C6orf25 WDR46 LY6G5C LY6G6D DAXX COL11A2 RING1 SNORD52 SLC39A7 SAPCD1 B3GALT4 PPT2 LSM2 PSMB8-AS1 AIF1 HSPA1L SNORD84 HLA-DQA2 HLA-DMB HLA-DQB1 PSMB8 HLA-DPB2 C4B HLA-DOB HCG25 NELFE HLA-DPA1 MSH5-SAPCD1 TNF EGFL8 HSPA1B HLA-DRB1 HLA-DPB1 HLA-DQB2 C4A NFKBIL1 MCCD1 VARS KIFC1 MIR3135B LOC102725068 HCG24 ZBTB22 ATP6V1G2-DDX39B MSH5 APOM LOC100287329 TAPBP PPT2-EGFL8 BTNL2 DDX39B HCP5 DDAH2 MIR4646 TAP1 AGPAT1 RXRB ABHD16A C2-AS1 NEU1 SAPCD1-AS1 ATP6V1G2 HSPA1A PRRC2A GPSM3 C6orf47 PRRT1 VPS52 CUTA LY6G6E SLC44A4 LOC101929163 HSD17B8 CYP21A2 LOC100294145 PFDN6 LTB HLA-DQA1 LY6G6F ZBTB12 MIR6832 RGL2 CLIC1 TNXB GPANK1 HLA-DRB5 C6orf48 HCG23 EHMT2 LOC100507547 HCG26 NOTCH4 PSMB9 SNORA38
nsv602104 Chr.6:32096949 - 32203906 on Build GRCh38 Loss PPT2-EGFL8 PPT2 ATF6B RNF5 GPSM3 FKBPL MIR6833 AGER PRRT1 TNXB MIR6721 AGPAT1 LOC100507547 PBX2 NOTCH4 EGFL8
nsv1112900 Chr.6:31455323 - 33480423 on Build GRCh38 Deletion C2 TAP2 STK19 MIR5004 MIR6833 CFB LTA BRD2 HLA-DMA DDX39B-AS1 RPS18 NCR3 PHF1 HLA-DRB6 HLA-DRA PPP1R2P1 MIR6721 PBX2 SNORD117 ATF6B SKIV2L ZBTB9 FKBPL C6orf10 LY6G5B MIR6834 AGER CSNK2B HLA-DQB1-AS1 TNXA LST1 DXO SNORD48 MIR6873 CYP21A1P MIR219A1 LY6G6C SYNGAP1 HLA-DOA MIR1236 RNF5 VWA7 MICB BAG6 C6orf25 WDR46 LY6G5C LY6G6D DAXX COL11A2 RING1 SNORD52 SLC39A7 SAPCD1 B3GALT4 PPT2 LSM2 PSMB8-AS1 AIF1 HSPA1L SNORD84 HLA-DQA2 HLA-DMB HLA-DQB1 PSMB8 HLA-DPB2 C4B HLA-DOB HCG25 NELFE HLA-DPA1 MSH5-SAPCD1 TNF EGFL8 HSPA1B HLA-DRB1 HLA-DPB1 HLA-DQB2 C4A NFKBIL1 MCCD1 VARS KIFC1 MIR3135B LOC102725068 HCG24 ZBTB22 ATP6V1G2-DDX39B MSH5 APOM LOC100287329 TAPBP PPT2-EGFL8 BTNL2 DDX39B HCP5 DDAH2 MIR4646 TAP1 AGPAT1 RXRB ABHD16A C2-AS1 NEU1 SAPCD1-AS1 ATP6V1G2 HSPA1A PRRC2A GPSM3 C6orf47 PRRT1 VPS52 CUTA LY6G6E SLC44A4 LOC101929163 HSD17B8 CYP21A2 LOC100294145 PFDN6 LTB HLA-DQA1 LY6G6F ZBTB12 MIR6832 RGL2 CLIC1 TNXB GPANK1 HLA-DRB5 C6orf48 HCG23 EHMT2 LOC100507547 HCG26 NOTCH4 PSMB9 SNORA38
dgv10404n54 Chr.6:31312550 - 32516591 on Build GRCh38 Loss C2 HSPA1B STK19 C4A NFKBIL1 MIR6833 CFB MCCD1 LTA VARS DDX39B-AS1 NCR3 LOC102725068 ATP6V1G2-DDX39B HLA-DRA MSH5 MIR6721 APOM LOC100287329 PBX2 SNORD117 PPT2-EGFL8 ATF6B SKIV2L BTNL2 FKBPL C6orf10 LY6G5B AGER CSNK2B DDX39B TNXA HCP5 LST1 DDAH2 MIR4646 HLA-B DXO SNORD48 AGPAT1 CYP21A1P ABHD16A LY6G6C C2-AS1 NEU1 SAPCD1-AS1 MIR1236 ATP6V1G2 RNF5 HSPA1A PRRC2A GPSM3 VWA7 MICB C6orf47 PRRT1 BAG6 C6orf25 LY6G6E SLC44A4 LOC101929163 LY6G5C LY6G6D CYP21A2 SNORD52 SAPCD1 MIR6891 LTB PPT2 LSM2 AIF1 HSPA1L SNORD84 LY6G6F ZBTB12 MIR6832 CLIC1 TNXB GPANK1 C6orf48 MICA HCG23 C4B EHMT2 NELFE LOC100507547 HCG26 NOTCH4 MSH5-SAPCD1 SNORA38 TNF EGFL8

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