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See other PPT2 CNV Assays ›
Gene Symbol
PPT2
Assay Reference Genome
Location

Chr.6:32155283 on build GRCh38
Cytoband
6p21.32
Assay ID Hs03603496_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 9374

Gene Name:

 palmitoyl-protein thioesterase 2

Gene Aliases:

 C6orf8, G14, PPT-2

Location:

 Chr.6:32153452-32163681 on Build GRCh38

Assay Gene Location:

 Within Intron 4
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PPT2 NM_001204103.1 NP_001191032.1
NM_005155.6 NP_005146.4
NM_138717.2 NP_619731.2
AF020543.1 AAB80730.1
AL110128.1 CAB53659.1
BC001355.2 AAH01355.1
CR533546.1 CAG38577.1
Y17958.1 CAB46981.1

Target Gene Details

Entrez Gene ID:

 100532746

Gene Name:

 PPT2-EGFL8 readthrough (NMD candidate)

Gene Aliases:

 -

Location:

 Chr.6:32153999-32168285 on Build GRCh38

Assay Gene Location:

 Within Intron 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PPT2-EGFL8 NR_037861.1
AB209572.1 BAD92809.1
AF020544.1 AAB80731.1
AK290473.1
AK296648.1
AK307427.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv830629 Chr.6:32076201 - 32222010 on Build GRCh38 Loss MIR6833 LOC100507547 TNXB ATF6B GPSM3 NOTCH4 RNF5 PPT2-EGFL8 MIR6721 PBX2 FKBPL PPT2 EGFL8 PRRT1 AGPAT1 AGER
dgv10472n54 Chr.6:31985690 - 32812026 on Build GRCh38 Loss HLA-DRB5 CYP21A2 ATF6B NOTCH4 HCG23 MIR3135B PPT2-EGFL8 HLA-DRB6 FKBPL PPT2 PRRT1 HLA-DQB2 HLA-DQB1 LOC101929163 C4A MIR6833 LOC100507547 TNXB TNXA GPSM3 BTNL2 RNF5 MIR6721 PBX2 HLA-DRA HLA-DQA1 EGFL8 C4B CYP21A1P AGPAT1 HLA-DRB1 HLA-DQB1-AS1 C6orf10 HLA-DQA2 AGER
dgv10463n54 Chr.6:31817661 - 32683279 on Build GRCh38 Loss HLA-DRB5 CFB CYP21A2 ATF6B NOTCH4 HCG23 PPT2-EGFL8 HLA-DRB6 SNORD48 HSPA1B PRRT1 NELFE SLC44A4 HLA-DQB1 NEU1 C2 BTNL2 HSPA1A SKIV2L C2-AS1 EGFL8 C4B AGPAT1 HLA-DQB1-AS1 EHMT2 C6orf10 AGER FKBPL MIR1236 PPT2 C6orf48 STK19 LOC101929163 C4A MIR6833 LOC100507547 TNXB TNXA GPSM3 RNF5 MIR6721 PBX2 ZBTB12 SNORD52 HLA-DRA HLA-DQA1 DXO CYP21A1P HLA-DRB1
esv2759415 Chr.6:31903735 - 32241336 on Build GRCh38 Gain+Loss CFB CYP21A2 ATF6B NOTCH4 PPT2-EGFL8 FKBPL MIR1236 PPT2 PRRT1 NELFE STK19 C4A MIR6833 LOC100507547 TNXB TNXA C2 GPSM3 RNF5 MIR6721 PBX2 SKIV2L C2-AS1 DXO EGFL8 C4B CYP21A1P AGPAT1 AGER
nsv1126749 Chr.6:31457323 - 32594423 on Build GRCh38 Deletion SNORD117 HLA-DRB5 CFB CYP21A2 ATF6B C6orf47 NOTCH4 HCG23 PPT2-EGFL8 AIF1 HLA-DRB6 SNORD48 DDX39B HSPA1B PRRT1 NFKBIL1 TNF DDX39B-AS1 NELFE VWA7 SLC44A4 HCG26 MIR4646 NEU1 HSPA1L LOC100287329 GPANK1 C2 BTNL2 HSPA1A SKIV2L LTB LTA C2-AS1 EGFL8 C4B MSH5-SAPCD1 AGPAT1 LY6G5B EHMT2 C6orf10 LY6G6D AGER CSNK2B LOC102725068 MSH5 NCR3 SNORA38 FKBPL SNORD84 MIR1236 LST1 LY6G5C LY6G6C PPT2 BAG6 PRRC2A C6orf25 ABHD16A APOM C6orf48 CLIC1 STK19 LOC101929163 C4A MIR6833 LOC100507547 TNXB LY6G6F TNXA LY6G6E MIR6832 GPSM3 RNF5 MIR6721 PBX2 ZBTB12 VARS SNORD52 HLA-DRA DXO SAPCD1-AS1 MCCD1 ATP6V1G2 SAPCD1 CYP21A1P LSM2 DDAH2 ATP6V1G2-DDX39B HLA-DRB1 HCP5 MICB
nsv1073969 Chr.6:31456422 - 33480523 on Build GRCh38 Deletion HLA-DRB5 CFB MIR6873 HCG23 AIF1 HLA-DRB6 DDX39B HSPA1B PRRT1 TNF MIR6834 DDX39B-AS1 HLA-DQB2 HLA-DQB1 MIR4646 HSPA1L HLA-DPB2 ZBTB22 TAPBP C2 SKIV2L C2-AS1 EGFL8 HLA-DMB EHMT2 C6orf10 AGER CSNK2B LOC102725068 NCR3 SNORA38 MIR3135B FKBPL B3GALT4 RPS18 PSMB9 LY6G5C PRRC2A BRD2 C6orf25 KIFC1 RXRB ABHD16A APOM SLC39A7 LOC101929163 HLA-DPB1 DAXX PPP1R2P1 LY6G6F LOC100294145 PBX2 ZBTB12 SNORD52 HLA-DRA HLA-DQA1 ATP6V1G2 SAPCD1 HLA-DOB LSM2 MIR5004 COL11A2 HLA-DQA2 HCP5 PSMB8 SNORD117 CYP21A2 ATF6B C6orf47 PFDN6 NOTCH4 PPT2-EGFL8 HLA-DPA1 SNORD48 TAP1 NFKBIL1 NELFE VWA7 SLC44A4 HCG26 NEU1 LOC100287329 GPANK1 VPS52 BTNL2 HSPA1A LTB LTA C4B MSH5-SAPCD1 AGPAT1 PHF1 LY6G5B HLA-DQB1-AS1 HCG25 MIR219A1 LY6G6D HCG24 MSH5 SNORD84 ZBTB9 HLA-DOA MIR1236 LST1 LY6G6C PPT2 PSMB8-AS1 BAG6 CUTA C6orf48 RGL2 CLIC1 STK19 SYNGAP1 C4A MIR6833 LOC100507547 TNXB TNXA LY6G6E MIR6832 GPSM3 RNF5 MIR6721 WDR46 VARS RING1 DXO HLA-DMA SAPCD1-AS1 MCCD1 CYP21A1P DDAH2 HSD17B8 ATP6V1G2-DDX39B HLA-DRB1 TAP2 MICB
nsv602104 Chr.6:32096949 - 32203906 on Build GRCh38 Loss MIR6833 LOC100507547 TNXB ATF6B GPSM3 NOTCH4 RNF5 PPT2-EGFL8 MIR6721 PBX2 FKBPL PPT2 EGFL8 PRRT1 AGPAT1 AGER
nsv1112900 Chr.6:31455323 - 33480423 on Build GRCh38 Deletion HLA-DRB5 CFB MIR6873 HCG23 AIF1 HLA-DRB6 DDX39B HSPA1B PRRT1 TNF MIR6834 DDX39B-AS1 HLA-DQB2 HLA-DQB1 MIR4646 HSPA1L HLA-DPB2 ZBTB22 TAPBP C2 SKIV2L C2-AS1 EGFL8 HLA-DMB EHMT2 C6orf10 AGER CSNK2B LOC102725068 NCR3 SNORA38 MIR3135B FKBPL B3GALT4 RPS18 PSMB9 LY6G5C PRRC2A BRD2 C6orf25 KIFC1 RXRB ABHD16A APOM SLC39A7 LOC101929163 HLA-DPB1 DAXX PPP1R2P1 LY6G6F LOC100294145 PBX2 ZBTB12 SNORD52 HLA-DRA HLA-DQA1 ATP6V1G2 SAPCD1 HLA-DOB LSM2 MIR5004 COL11A2 HLA-DQA2 HCP5 PSMB8 SNORD117 CYP21A2 ATF6B C6orf47 PFDN6 NOTCH4 PPT2-EGFL8 HLA-DPA1 SNORD48 TAP1 NFKBIL1 NELFE VWA7 SLC44A4 HCG26 NEU1 LOC100287329 GPANK1 VPS52 BTNL2 HSPA1A LTB LTA C4B MSH5-SAPCD1 AGPAT1 PHF1 LY6G5B HLA-DQB1-AS1 HCG25 MIR219A1 LY6G6D HCG24 MSH5 SNORD84 ZBTB9 HLA-DOA MIR1236 LST1 LY6G6C PPT2 PSMB8-AS1 BAG6 CUTA C6orf48 RGL2 CLIC1 STK19 SYNGAP1 C4A MIR6833 LOC100507547 TNXB TNXA LY6G6E MIR6832 GPSM3 RNF5 MIR6721 WDR46 VARS RING1 DXO HLA-DMA SAPCD1-AS1 MCCD1 CYP21A1P DDAH2 HSD17B8 ATP6V1G2-DDX39B HLA-DRB1 TAP2 MICB
dgv10404n54 Chr.6:31312550 - 32516591 on Build GRCh38 Loss SNORD117 CFB CYP21A2 ATF6B C6orf47 NOTCH4 HCG23 PPT2-EGFL8 AIF1 SNORD48 DDX39B MIR6891 HSPA1B PRRT1 NFKBIL1 TNF DDX39B-AS1 NELFE VWA7 SLC44A4 HCG26 MIR4646 NEU1 HSPA1L LOC100287329 GPANK1 C2 BTNL2 HSPA1A SKIV2L LTB LTA C2-AS1 EGFL8 C4B MSH5-SAPCD1 AGPAT1 LY6G5B EHMT2 C6orf10 LY6G6D AGER CSNK2B LOC102725068 MSH5 NCR3 SNORA38 FKBPL SNORD84 MIR1236 LST1 LY6G5C LY6G6C PPT2 BAG6 PRRC2A C6orf25 ABHD16A APOM C6orf48 CLIC1 STK19 LOC101929163 C4A MIR6833 LOC100507547 TNXB LY6G6F TNXA LY6G6E MIR6832 GPSM3 RNF5 MICA MIR6721 PBX2 HLA-B ZBTB12 VARS SNORD52 HLA-DRA DXO SAPCD1-AS1 MCCD1 ATP6V1G2 SAPCD1 CYP21A1P LSM2 DDAH2 ATP6V1G2-DDX39B HCP5 MICB

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