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See other ATP6V1G2-DDX39B CNV Assays ›
Gene Symbol
ATP6V1G2-DDX39B
Assay Reference Genome
Location

Chr.6:31534792 on build GRCh38
Cytoband
6p21.33
Assay ID Hs03606304_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 100532737

Gene Name:

 ATP6V1G2-DDX39B readthrough (NMD candidate)

Gene Aliases:

 -

Location:

 Chr.6:31530219-31546848 on Build GRCh38

Assay Gene Location:

 Within Intron 8
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ATP6V1G2-DDX39B NR_037853.1

Target Gene Details

Entrez Gene ID:

 7919

Gene Name:

 DEAD-box helicase 39B

Gene Aliases:

 BAT1, D6S81E, UAP56

Location:

 Chr.6:31530219-31542475 on Build GRCh38

Assay Gene Location:

 Within Intron 6
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
DDX39B NM_004640.6 NP_004631.1
NM_080598.5 NP_542165.1
NR_037852.1
AK127767.1 5 2781
AK222912.1 BAD96632.1
AK295634.1
AK295854.1 4 1145
AK298194.1
AK316469.1
BC000361.2 AAH00361.1
BC013006.2 AAH13006.1
BT009909.1 AAP88911.1
Z37166.1 CAA85523.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2759414 Chr.6:31060513 - 31574531 on Build GRCh38 Gain+Loss SNORD84 MCCD1 LOC100287329 HCG26 LOC102725068 HCG27 PSORS1C2 MIR6891 POU5F1 TCF19 DDX39B-AS1 HCP5 PSORS1C3 HLA-B MICB ATP6V1G2 HLA-C NFKBIL1 C6orf15 CCHCR1 CDSN MICA PSORS1C1 LTA DDX39B SNORD117 ATP6V1G2-DDX39B
nsv1126749 Chr.6:31457323 - 32594423 on Build GRCh38 Deletion TNXB MCCD1 C2-AS1 MIR6833 GPANK1 C6orf10 LOC100287329 SNORD52 HCG26 MSH5 HCG23 HLA-DRA AGPAT1 LY6G6C MIR6832 LSM2 MIR1236 NELFE ATF6B DDX39B-AS1 PRRT1 HCP5 LY6G6E HSPA1L VARS ZBTB12 MIR4646 BAG6 PPT2-EGFL8 MICB ATP6V1G2 NFKBIL1 DXO PBX2 C6orf48 BTNL2 C4B TNF LOC100507547 HSPA1B CSNK2B LY6G6F SAPCD1-AS1 CFB NOTCH4 DDX39B NCR3 VWA7 SNORA38 SNORD117 ATP6V1G2-DDX39B LOC101929163 FKBPL SNORD84 NEU1 MSH5-SAPCD1 RNF5 LOC102725068 LST1 MIR6721 HLA-DRB6 LY6G5B LY6G6D SAPCD1 CYP21A1P ABHD16A TNXA SKIV2L HSPA1A DDAH2 C4A AIF1 EHMT2 GPSM3 PRRC2A PPT2 STK19 LTB SLC44A4 LY6G5C C6orf47 AGER SNORD48 EGFL8 HLA-DRB1 HLA-DRB5 APOM C2 C6orf25 LTA CLIC1 CYP21A2
dgv10403n54 Chr.6:31312324 - 32049763 on Build GRCh38 Loss TNXB MCCD1 C2-AS1 GPANK1 LOC100287329 SNORD52 HCG26 MSH5 LY6G6C MIR6832 LSM2 MIR1236 NELFE DDX39B-AS1 HCP5 LY6G6E HSPA1L VARS ZBTB12 MIR4646 BAG6 MICB ATP6V1G2 NFKBIL1 DXO C6orf48 C4B TNF HSPA1B CSNK2B LY6G6F SAPCD1-AS1 CFB DDX39B NCR3 VWA7 SNORA38 SNORD117 ATP6V1G2-DDX39B SNORD84 NEU1 MSH5-SAPCD1 LOC102725068 LST1 MIR6891 LY6G5B LY6G6D SAPCD1 CYP21A1P ABHD16A TNXA SKIV2L HSPA1A DDAH2 C4A AIF1 HLA-B EHMT2 PRRC2A STK19 LTB SLC44A4 LY6G5C C6orf47 SNORD48 MICA APOM C2 C6orf25 LTA CLIC1 CYP21A2
nsv1073969 Chr.6:31456422 - 33480523 on Build GRCh38 Deletion TNXB MCCD1 MIR6833 KIFC1 GPANK1 LOC100287329 SNORD52 HCG26 HCG23 PPP1R2P1 HCG24 LY6G6C MIR1236 NELFE PRRT1 LY6G6E COL11A2 VARS RGL2 MICB PBX2 MIR219A1 BTNL2 TNF SLC39A7 ZBTB22 LOC100507547 MIR5004 RING1 LY6G6F NOTCH4 DDX39B PHF1 SNORA38 LOC101929163 FKBPL NEU1 MSH5-SAPCD1 HCG25 PSMB8-AS1 MIR6721 LY6G5B LY6G6D ABHD16A TNXA SKIV2L HSPA1A DDAH2 CUTA ZBTB9 C4A AIF1 VPS52 LY6G5C C6orf47 HLA-DQB2 AGER SNORD48 HLA-DRB1 C2 PFDN6 MIR3135B HLA-DOA C2-AS1 C6orf10 HLA-DQB1 MSH5 HLA-DRA HLA-DMB AGPAT1 BRD2 MIR6832 RXRB LSM2 LOC100294145 MIR6834 ATF6B HLA-DQA2 DDX39B-AS1 HCP5 HSPA1L ZBTB12 HLA-DOB MIR4646 HLA-DQA1 BAG6 PPT2-EGFL8 ATP6V1G2 NFKBIL1 DXO C6orf48 PSMB9 SYNGAP1 C4B HSPA1B TAP2 CSNK2B SAPCD1-AS1 CFB RPS18 NCR3 VWA7 SNORD117 ATP6V1G2-DDX39B PSMB8 SNORD84 HLA-DPA1 RNF5 LOC102725068 LST1 HLA-DPB2 HLA-DRB6 SAPCD1 CYP21A1P HLA-DPB1 MIR6873 DAXX EHMT2 GPSM3 PRRC2A PPT2 B3GALT4 HLA-DQB1-AS1 STK19 LTB SLC44A4 TAP1 EGFL8 TAPBP WDR46 HLA-DRB5 APOM HSD17B8 C6orf25 HLA-DMA LTA CLIC1 CYP21A2
nsv1112900 Chr.6:31455323 - 33480423 on Build GRCh38 Deletion TNXB MCCD1 MIR6833 KIFC1 GPANK1 LOC100287329 SNORD52 HCG26 HCG23 PPP1R2P1 HCG24 LY6G6C MIR1236 NELFE PRRT1 LY6G6E COL11A2 VARS RGL2 MICB PBX2 MIR219A1 BTNL2 TNF SLC39A7 ZBTB22 LOC100507547 MIR5004 RING1 LY6G6F NOTCH4 DDX39B PHF1 SNORA38 LOC101929163 FKBPL NEU1 MSH5-SAPCD1 HCG25 PSMB8-AS1 MIR6721 LY6G5B LY6G6D ABHD16A TNXA SKIV2L HSPA1A DDAH2 CUTA ZBTB9 C4A AIF1 VPS52 LY6G5C C6orf47 HLA-DQB2 AGER SNORD48 HLA-DRB1 C2 PFDN6 MIR3135B HLA-DOA C2-AS1 C6orf10 HLA-DQB1 MSH5 HLA-DRA HLA-DMB AGPAT1 BRD2 MIR6832 RXRB LSM2 LOC100294145 MIR6834 ATF6B HLA-DQA2 DDX39B-AS1 HCP5 HSPA1L ZBTB12 HLA-DOB MIR4646 HLA-DQA1 BAG6 PPT2-EGFL8 ATP6V1G2 NFKBIL1 DXO C6orf48 PSMB9 SYNGAP1 C4B HSPA1B TAP2 CSNK2B SAPCD1-AS1 CFB RPS18 NCR3 VWA7 SNORD117 ATP6V1G2-DDX39B PSMB8 SNORD84 HLA-DPA1 RNF5 LOC102725068 LST1 HLA-DPB2 HLA-DRB6 SAPCD1 CYP21A1P HLA-DPB1 MIR6873 DAXX EHMT2 GPSM3 PRRC2A PPT2 B3GALT4 HLA-DQB1-AS1 STK19 LTB SLC44A4 TAP1 EGFL8 TAPBP WDR46 HLA-DRB5 APOM HSD17B8 C6orf25 HLA-DMA LTA CLIC1 CYP21A2
dgv10404n54 Chr.6:31312550 - 32516591 on Build GRCh38 Loss TNXB MCCD1 C2-AS1 MIR6833 GPANK1 C6orf10 LOC100287329 SNORD52 HCG26 MSH5 HCG23 HLA-DRA AGPAT1 LY6G6C MIR6832 LSM2 MIR1236 NELFE ATF6B DDX39B-AS1 PRRT1 HCP5 LY6G6E HSPA1L VARS ZBTB12 MIR4646 BAG6 PPT2-EGFL8 MICB ATP6V1G2 NFKBIL1 DXO PBX2 C6orf48 BTNL2 C4B TNF LOC100507547 HSPA1B CSNK2B LY6G6F SAPCD1-AS1 CFB NOTCH4 DDX39B NCR3 VWA7 SNORA38 SNORD117 ATP6V1G2-DDX39B LOC101929163 FKBPL SNORD84 NEU1 MSH5-SAPCD1 RNF5 LOC102725068 LST1 MIR6721 MIR6891 LY6G5B LY6G6D SAPCD1 CYP21A1P ABHD16A TNXA SKIV2L HSPA1A DDAH2 C4A AIF1 HLA-B EHMT2 GPSM3 PRRC2A PPT2 STK19 LTB SLC44A4 LY6G5C C6orf47 AGER SNORD48 EGFL8 MICA APOM C2 C6orf25 LTA CLIC1 CYP21A2
nsv470809 Chr.6:31529138 - 31576412 on Build GRCh38 Loss SNORD84 TNF MCCD1 ATP6V1G2 NFKBIL1 LOC100287329 DDX39B-AS1 LTA DDX39B SNORD117 ATP6V1G2-DDX39B
nsv830627 Chr.6:31528437 - 31692173 on Build GRCh38 Loss SNORD84 MCCD1 GPANK1 LOC100287329 LST1 LY6G5B ABHD16A MIR6832 DDX39B-AS1 AIF1 BAG6 PRRC2A ATP6V1G2 LTB NFKBIL1 LY6G5C C6orf47 TNF APOM CSNK2B LTA DDX39B NCR3 SNORA38 SNORD117 ATP6V1G2-DDX39B

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