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See other C2 CNV Assays ›
Gene Symbol
C2
Assay Reference Genome
Location

Chr.6:31923254 on build GRCh38
Cytoband
6p21.33
Assay ID Hs03610026_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 717

Gene Name:

 complement component 2

Gene Aliases:

 ARMD14, CO2

Location:

 Chr.6:31897785-31945674 on Build GRCh38

Assay Gene Location:

 Within Intron 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
C2 NM_001178063.2 NP_001171534.1
NM_001282457.1 NP_001269386.1
AK096258.1
AK298311.1
AK298808.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv10463n54 Chr.6:31817661 - 32683279 on Build GRCh38 Loss LOC100507547 EHMT2 HLA-DQB1-AS1 DXO SNORD52 PPT2-EGFL8 CYP21A2 SLC44A4 ZBTB12 SNORD48 PRRT1 TNXB HSPA1B PBX2 NEU1 LOC101929163 HCG23 C2 MIR6721 HLA-DRB5 C4B MIR1236 AGPAT1 AGER HLA-DRA HLA-DRB6 FKBPL NELFE C6orf10 EGFL8 CFB C4A ATF6B HLA-DQB1 STK19 C2-AS1 PPT2 RNF5 SKIV2L BTNL2 NOTCH4 HLA-DQA1 MIR6833 HLA-DRB1 CYP21A1P TNXA C6orf48 HSPA1A GPSM3
nsv428141 Chr.6:31903735 - 32125066 on Build GRCh38 Gain+Loss CFB C4A ATF6B STK19 C2-AS1 C2 DXO C4B SKIV2L TNXB MIR1236 CYP21A2 CYP21A1P TNXA NELFE
nsv1126749 Chr.6:31457323 - 32594423 on Build GRCh38 Deletion DDAH2 LOC100507547 ABHD16A EHMT2 LTA LY6G5C DXO SNORD52 LY6G6C APOM SAPCD1-AS1 LTB ATP6V1G2-DDX39B PPT2-EGFL8 MICB CYP21A2 C6orf25 SNORA38 AIF1 TNF SLC44A4 SNORD84 ZBTB12 SNORD48 LST1 LY6G6E GPANK1 DDX39B PRRT1 TNXB BAG6 HSPA1B PBX2 LY6G6D NEU1 NFKBIL1 LOC101929163 SAPCD1 HCG23 DDX39B-AS1 C2 MIR6721 HLA-DRB5 PRRC2A C4B MIR1236 AGPAT1 LOC100287329 MCCD1 AGER HLA-DRA C6orf47 HLA-DRB6 NCR3 LY6G6F FKBPL CLIC1 HCG26 NELFE C6orf10 MIR4646 EGFL8 MIR6832 CFB C4A SNORD117 ATF6B STK19 LOC102725068 C2-AS1 PPT2 RNF5 MSH5 ATP6V1G2 SKIV2L BTNL2 NOTCH4 HSPA1L VARS HCP5 LSM2 VWA7 MIR6833 CSNK2B LY6G5B HLA-DRB1 CYP21A1P TNXA MSH5-SAPCD1 C6orf48 HSPA1A GPSM3
nsv601960 Chr.6:31870664 - 31939370 on Build GRCh38 Loss SLC44A4 ZBTB12 EHMT2 C2-AS1 C2
dgv10403n54 Chr.6:31312324 - 32049763 on Build GRCh38 Loss DDAH2 ABHD16A EHMT2 LTA LY6G5C DXO SNORD52 LY6G6C APOM SAPCD1-AS1 LTB ATP6V1G2-DDX39B MICB CYP21A2 C6orf25 SNORA38 AIF1 TNF HLA-B SLC44A4 SNORD84 ZBTB12 SNORD48 LST1 LY6G6E GPANK1 DDX39B TNXB BAG6 HSPA1B MIR6891 LY6G6D NEU1 NFKBIL1 SAPCD1 DDX39B-AS1 C2 PRRC2A C4B MIR1236 LOC100287329 MCCD1 C6orf47 MICA NCR3 LY6G6F CLIC1 HCG26 NELFE MIR4646 MIR6832 CFB C4A SNORD117 STK19 LOC102725068 C2-AS1 MSH5 ATP6V1G2 SKIV2L HSPA1L VARS HCP5 LSM2 VWA7 CSNK2B LY6G5B CYP21A1P TNXA MSH5-SAPCD1 C6orf48 HSPA1A
nsv1073969 Chr.6:31456422 - 33480523 on Build GRCh38 Deletion DDAH2 LOC100507547 ABHD16A HLA-DOA COL11A2 LY6G5C HLA-DQB1-AS1 HCG24 LY6G6C SAPCD1-AS1 PPT2-EGFL8 MICB HLA-DPA1 HSD17B8 SNORD84 ZBTB12 SNORD48 HLA-DPB1 LST1 HLA-DMA HCG25 ZBTB22 PBX2 LY6G6D NEU1 LOC101929163 SAPCD1 RGL2 HCG23 C2 MIR6721 HLA-DRB5 PRRC2A MIR1236 KIFC1 C6orf47 MIR219A1 ZBTB9 HCG26 CFB C4A SNORD117 ATF6B HLA-DQB1 C2-AS1 PPT2 MSH5 ATP6V1G2 SKIV2L BTNL2 NOTCH4 PSMB8 RPS18 HCP5 SYNGAP1 HLA-DQA1 CSNK2B SLC39A7 PSMB8-AS1 TNXA C6orf48 MIR5004 HSPA1A EHMT2 LTA DXO SNORD52 TAP2 HLA-DMB APOM LTB ATP6V1G2-DDX39B BRD2 CYP21A2 C6orf25 SNORA38 AIF1 TNF SLC44A4 HLA-DOB HLA-DQB2 LY6G6E GPANK1 MIR3135B RING1 DDX39B PRRT1 TNXB RXRB BAG6 HLA-DPB2 HSPA1B LOC100294145 PHF1 NFKBIL1 B3GALT4 MIR6834 TAP1 PSMB9 DAXX DDX39B-AS1 C4B AGPAT1 LOC100287329 MCCD1 AGER HLA-DRA HLA-DRB6 NCR3 LY6G6F FKBPL CLIC1 NELFE PFDN6 C6orf10 MIR4646 EGFL8 MIR6832 STK19 LOC102725068 RNF5 WDR46 HSPA1L TAPBP VARS LSM2 PPP1R2P1 VWA7 CUTA MIR6833 LY6G5B HLA-DRB1 VPS52 MIR6873 CYP21A1P MSH5-SAPCD1 HLA-DQA2 GPSM3
nsv1112900 Chr.6:31455323 - 33480423 on Build GRCh38 Deletion DDAH2 LOC100507547 ABHD16A HLA-DOA COL11A2 LY6G5C HLA-DQB1-AS1 HCG24 LY6G6C SAPCD1-AS1 PPT2-EGFL8 MICB HLA-DPA1 HSD17B8 SNORD84 ZBTB12 SNORD48 HLA-DPB1 LST1 HLA-DMA HCG25 ZBTB22 PBX2 LY6G6D NEU1 LOC101929163 SAPCD1 RGL2 HCG23 C2 MIR6721 HLA-DRB5 PRRC2A MIR1236 KIFC1 C6orf47 MIR219A1 ZBTB9 HCG26 CFB C4A SNORD117 ATF6B HLA-DQB1 C2-AS1 PPT2 MSH5 ATP6V1G2 SKIV2L BTNL2 NOTCH4 PSMB8 RPS18 HCP5 SYNGAP1 HLA-DQA1 CSNK2B SLC39A7 PSMB8-AS1 TNXA C6orf48 MIR5004 HSPA1A EHMT2 LTA DXO SNORD52 TAP2 HLA-DMB APOM LTB ATP6V1G2-DDX39B BRD2 CYP21A2 C6orf25 SNORA38 AIF1 TNF SLC44A4 HLA-DOB HLA-DQB2 LY6G6E GPANK1 MIR3135B RING1 DDX39B PRRT1 TNXB RXRB BAG6 HLA-DPB2 HSPA1B LOC100294145 PHF1 NFKBIL1 B3GALT4 MIR6834 TAP1 PSMB9 DAXX DDX39B-AS1 C4B AGPAT1 LOC100287329 MCCD1 AGER HLA-DRA HLA-DRB6 NCR3 LY6G6F FKBPL CLIC1 NELFE PFDN6 C6orf10 MIR4646 EGFL8 MIR6832 STK19 LOC102725068 RNF5 WDR46 HSPA1L TAPBP VARS LSM2 PPP1R2P1 VWA7 CUTA MIR6833 LY6G5B HLA-DRB1 VPS52 MIR6873 CYP21A1P MSH5-SAPCD1 HLA-DQA2 GPSM3
nsv830628 Chr.6:31919777 - 31979823 on Build GRCh38 Loss CFB STK19 C2-AS1 C2 DXO NELFE SKIV2L MIR1236
dgv10404n54 Chr.6:31312550 - 32516591 on Build GRCh38 Loss DDAH2 LOC100507547 ABHD16A EHMT2 LTA LY6G5C DXO SNORD52 LY6G6C APOM SAPCD1-AS1 LTB ATP6V1G2-DDX39B PPT2-EGFL8 MICB CYP21A2 C6orf25 SNORA38 AIF1 TNF HLA-B SLC44A4 SNORD84 ZBTB12 SNORD48 LST1 LY6G6E GPANK1 DDX39B PRRT1 TNXB BAG6 HSPA1B MIR6891 PBX2 LY6G6D NEU1 NFKBIL1 LOC101929163 SAPCD1 HCG23 DDX39B-AS1 C2 MIR6721 PRRC2A C4B MIR1236 AGPAT1 LOC100287329 MCCD1 AGER HLA-DRA C6orf47 MICA NCR3 LY6G6F FKBPL CLIC1 HCG26 NELFE C6orf10 MIR4646 EGFL8 MIR6832 CFB C4A SNORD117 ATF6B STK19 LOC102725068 C2-AS1 PPT2 RNF5 MSH5 ATP6V1G2 SKIV2L BTNL2 NOTCH4 HSPA1L VARS HCP5 LSM2 VWA7 MIR6833 CSNK2B LY6G5B CYP21A1P TNXA MSH5-SAPCD1 C6orf48 HSPA1A GPSM3
nsv509126 Chr.6:31861697 - 31934646 on Build GRCh38 Insertion SLC44A4 ZBTB12 EHMT2 C2-AS1 C2 NEU1

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