Name: [Hs03657877_cn] [AGPAT5]
Creator: Thermo Fisher Scientific
Keywords: [AGPAT5] Assay, [1-acylglycerol-3-phosphate O-acyltransferase 5] Assay

Genomic Map

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Assay Details

Target Gene Details

Entrez Gene ID:	55326
Gene Name:	1-acylglycerol-3-phosphate O-acyltransferase 5
Gene Aliases:	1AGPAT5, LPAATE
Location:	Chr.8:6708357-6761503 on Build GRCh38
Assay Gene Location:	Within Intron 1

Gene Symbol	Transcript Accession	Protein ID
AGPAT5	NM_018361.3	NP_060831.2
	XM_011534751.2	XP_011533053.1
	AF375789.1	AAK54809.1
	AK002072.1	BAA92069.1
	AK310545.1
	AL136587.1	CAB66522.1
	BC023550.2	AAH23550.1
	BC068519.1	AAH68519.1
	BC080537.1	AAH80537.1

Target Copy Number Variation Details

DGV Version:

Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1021684	Chr.8:6492570 - 6951933 on Build GRCh38	Loss	AGPAT5 DEFB1 DEFA6 DEFA4 MCPH1-AS1 ANGPT2 MCPH1 MIR4659B MIR4659A XKR5 MIR8055 DEFA8P GS1-24F4.2
nsv610004	Chr.8:6544845 - 6915391 on Build GRCh38	Gain	XKR5 MIR8055 AGPAT5 DEFB1 MCPH1-AS1 ANGPT2 MCPH1 MIR4659B GS1-24F4.2 MIR4659A
nsv1025976	Chr.8:6615427 - 6829450 on Build GRCh38	Loss	XKR5 MIR8055 AGPAT5 MCPH1-AS1 MCPH1 MIR4659B MIR4659A
nsv6059	Chr.8:6693878 - 6726740 on Build GRCh38	Insertion	AGPAT5 MCPH1-AS1
esv2422383	Chr.8:6504868 - 6924071 on Build GRCh38	Duplication	XKR5 MIR8055 AGPAT5 DEFB1 MCPH1-AS1 ANGPT2 MCPH1 MIR4659B GS1-24F4.2 MIR4659A
nsv831220	Chr.8:6670324 - 6870969 on Build GRCh38	Gain	XKR5 AGPAT5 DEFB1 MCPH1-AS1 MIR4659B GS1-24F4.2 MIR4659A
nsv465436	Chr.8:6710680 - 7063882 on Build GRCh38	Gain	DEFA10P DEFT1P2 AGPAT5 DEFB1 DEFA6 DEFA4 MIR4659B DEFA7P MIR4659A DEFA1 DEFA9P XKR5 DEFA8P DEFA1B DEFA3 DEFT1P DEFA5 DEFA11P GS1-24F4.2
dgv6876n100	Chr.8:6687977 - 6812428 on Build GRCh38	Loss	XKR5 AGPAT5 MCPH1-AS1 MIR4659B MIR4659A