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See other PTGDS CNV Assays ›
Gene Symbol
PTGDS
Assay Reference Genome
Location

Chr.9:136980691 on build GRCh38
Cytoband
9q34.3
Assay ID Hs03706017_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 5730

Gene Name:

 prostaglandin D2 synthase

Gene Aliases:

 L-PGDS, LPGDS, PDS, PGD2, PGDS, PGDS2

Location:

 Chr.9:136977504-136981742 on Build GRCh38

Assay Gene Location:

 Within Intron 5
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PTGDS NM_000954.5 NP_000945.3
AA621632.1
AI659247.1
AK075333.1
AK312817.1
AY026356.1 AAK07679.1
BC005939.1 AAH05939.1
BG037037.1
BM686612.1
BT019921.1 AAV38724.1
BT019922.1 AAV38725.1
M61900.2

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv615997 Chr.9:136977199 - 136984376 on Build GRCh38 Loss PTGDS LCNL1
nsv615991 Chr.9:136972675 - 137011907 on Build GRCh38 Loss C9orf142 CLIC3 ABCA2 PTGDS LCNL1 PRR31
dgv13007n54 Chr.9:136966179 - 137173890 on Build GRCh38 Loss MIR3621 C9orf142 UAP1L1 MAN1B1 CLIC3 PTGDS LCNL1 GRIN1 MAN1B1-AS1 PRR31 ENTPD2 SAPCD2 FUT7 ABCA2 TMEM210 NPDC1 DPP7 LOC101930307 C9orf139 LRRC26
nsv615993 Chr.9:136975638 - 136983246 on Build GRCh38 Gain PTGDS LCNL1
nsv818738 Chr.9:136740043 - 137009585 on Build GRCh38 Gain CCDC183-AS1 C9orf142 MIR6722 LCN8 LCNL1 LCN12 C8G ABCA2 LCN6 C9orf172 TMEM141 CLIC3 FBXW5 MIR4292 PTGDS LCN15 PRR31 MIR4479 PHPT1 MAMDC4 LCN10 EDF1 CCDC183 LOC100128593 RABL6 TRAF2
nsv524322 Chr.9:136795692 - 137482216 on Build GRCh38 Loss NDOR1 SLC34A3 MIR7114 C8G ABCA2 TMEM210 DPP7 UAP1L1 TMEM203 FBXW5 TPRN NRARP C9orf173-AS1 MAN1B1-AS1 PHPT1 RNF208 NPDC1 RNF224 RABL6 TRAF2 C9orf139 LRRC26 MIR3621 CCDC183-AS1 FAM166A C9orf142 SSNA1 MAN1B1 LCNL1 NSMF LCN12 STPG3 TUBB4B SAPCD2 EXD3 FUT7 LOC101930307 TOR4A NELFB NOXA1 PNPLA7 C9orf172 CLIC3 MIR4292 PTGDS GRIN1 ENTPD8 PRR31 ENTPD2 MIR4479 ANAPC2 MAMDC4 EDF1 CCDC183 CYSRT1
nsv951206 Chr.9:136944849 - 137114548 on Build GRCh38 Deletion C9orf142 UAP1L1 MAN1B1 CLIC3 PTGDS LCNL1 LCN12 MAN1B1-AS1 PRR31 ENTPD2 SAPCD2 FUT7 C8G ABCA2 NPDC1 DPP7 LOC101930307 C9orf139
nsv616002 Chr.9:136977855 - 136981118 on Build GRCh38 Loss PTGDS
nsv469918 Chr.9:136359865 - 137173890 on Build GRCh38 Loss MIR6722 INPP5E SEC16A LINC01451 C8G ABCA2 TMEM210 CARD9 DPP7 LCN6 MIR4673 UAP1L1 FBXW5 EGFL7 C9orf163 NALT1 LCN15 SNORA17A MAN1B1-AS1 SNHG7 PHPT1 PMPCA NPDC1 RABL6 AGPAT2 TRAF2 MIR126 C9orf139 LRRC26 MIR3621 CCDC183-AS1 C9orf142 MAN1B1 SNORA17B LCN8 HSPC324 LCNL1 LCN12 SAPCD2 DNLZ NOTCH1 FUT7 LOC101930307 SDCCAG3 C9orf172 TMEM141 CLIC3 MIR4292 SNAPC4 PTGDS GRIN1 PRR31 ENTPD2 MIR4479 MAMDC4 LCN10 EDF1 CCDC183 LOC100128593 FAM69B MIR4674
esv2422220 Chr.9:136584135 - 137350098 on Build GRCh38 Deletion NDOR1 MIR6722 SLC34A3 LINC01451 C8G ABCA2 TMEM210 DPP7 LCN6 UAP1L1 TMEM203 FBXW5 EGFL7 LCN15 TPRN NRARP SNORA17A C9orf173-AS1 MAN1B1-AS1 SNHG7 PHPT1 RNF208 NPDC1 RNF224 RABL6 AGPAT2 TRAF2 MIR126 C9orf139 LRRC26 MIR3621 CCDC183-AS1 FAM166A C9orf142 SSNA1 MAN1B1 SNORA17B LCN8 HSPC324 LCNL1 LCN12 STPG3 TUBB4B SAPCD2 EXD3 FUT7 LOC101930307 TOR4A NELFB C9orf172 TMEM141 CLIC3 MIR4292 PTGDS GRIN1 PRR31 ENTPD2 MIR4479 ANAPC2 MAMDC4 LCN10 EDF1 CCDC183 LOC100128593 FAM69B CYSRT1

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