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See other PTGDS CNV Assays ›
Gene Symbol
PTGDS
Assay Reference Genome
Location

Chr.9:136980691 on build GRCh38
Cytoband
9q34.3
Assay ID Hs03706017_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 5730

Gene Name:

 prostaglandin D2 synthase

Gene Aliases:

 L-PGDS, LPGDS, PDS, PGD2, PGDS, PGDS2

Location:

 Chr.9:136977504-136981742 on Build GRCh38

Assay Gene Location:

 Within Intron 5
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PTGDS NM_000954.5 NP_000945.3
AA621632.1
AI659247.1
AK075333.1
AK312817.1
AY026356.1 AAK07679.1
BC005939.1 AAH05939.1
BG037037.1
BM686612.1
BT019921.1 AAV38724.1
BT019922.1 AAV38725.1
M61900.2

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv615997 Chr.9:136977199 - 136984376 on Build GRCh38 Loss LCNL1 PTGDS
dgv13007n54 Chr.9:136966179 - 137173890 on Build GRCh38 Loss C9orf139 ENTPD2 ABCA2 MIR3621 CLIC3 UAP1L1 PTGDS LRRC26 TMEM210 DPP7 MAN1B1 NPDC1 C9orf142 GRIN1 LCNL1 SAPCD2 PRR31 MAN1B1-AS1 LOC101930307 FUT7
nsv615991 Chr.9:136972675 - 137011907 on Build GRCh38 Loss ABCA2 C9orf142 LCNL1 CLIC3 PRR31 PTGDS
nsv615993 Chr.9:136975638 - 136983246 on Build GRCh38 Gain LCNL1 PTGDS
nsv818738 Chr.9:136740043 - 137009585 on Build GRCh38 Gain ABCA2 LCN15 TMEM141 FBXW5 MIR6722 PTGDS MIR4292 LCN12 C9orf142 LCN10 TRAF2 LCN8 RABL6 CCDC183-AS1 C9orf172 LCN6 C8G EDF1 CLIC3 CCDC183 MIR4479 PHPT1 LCNL1 LOC100128593 MAMDC4 PRR31
nsv524322 Chr.9:136795692 - 137482216 on Build GRCh38 Loss ENTPD2 ABCA2 NDOR1 UAP1L1 FBXW5 CYSRT1 PTGDS C9orf173-AS1 MAN1B1 C9orf142 SLC34A3 GRIN1 RNF224 LOC101930307 MIR3621 C8G EDF1 CLIC3 EXD3 TPRN MIR4479 LCNL1 PRR31 MAN1B1-AS1 TUBB4B RNF208 NSMF STPG3 TMEM210 DPP7 MIR4292 LCN12 NPDC1 TRAF2 NRARP NOXA1 RABL6 SAPCD2 CCDC183-AS1 NELFB C9orf172 FUT7 ANAPC2 C9orf139 SSNA1 MIR7114 LRRC26 FAM166A CCDC183 PNPLA7 PHPT1 ENTPD8 TMEM203 TOR4A MAMDC4
nsv951206 Chr.9:136944849 - 137114548 on Build GRCh38 Deletion C9orf139 ENTPD2 ABCA2 C8G CLIC3 UAP1L1 PTGDS DPP7 MAN1B1 LCN12 NPDC1 C9orf142 LCNL1 SAPCD2 PRR31 MAN1B1-AS1 LOC101930307 FUT7
nsv469918 Chr.9:136359865 - 137173890 on Build GRCh38 Loss ENTPD2 ABCA2 MIR126 SNAPC4 UAP1L1 FBXW5 MIR6722 PTGDS MAN1B1 C9orf142 GRIN1 LCN8 FAM69B MIR4674 LCN6 LOC101930307 MIR3621 NALT1 C8G EDF1 CLIC3 AGPAT2 EGFL7 DNLZ MIR4479 LCNL1 MIR4673 SEC16A C9orf163 PRR31 MAN1B1-AS1 LCN15 HSPC324 TMEM141 PMPCA INPP5E SNHG7 TMEM210 DPP7 MIR4292 LCN12 NPDC1 LCN10 TRAF2 RABL6 SAPCD2 CCDC183-AS1 LINC01451 SDCCAG3 C9orf172 FUT7 SNORA17B C9orf139 SNORA17A LRRC26 CCDC183 PHPT1 CARD9 LOC100128593 MAMDC4 NOTCH1
nsv616002 Chr.9:136977855 - 136981118 on Build GRCh38 Loss PTGDS
esv2422220 Chr.9:136584135 - 137350098 on Build GRCh38 Deletion ENTPD2 ABCA2 MIR126 NDOR1 UAP1L1 FBXW5 CYSRT1 MIR6722 PTGDS C9orf173-AS1 MAN1B1 C9orf142 SLC34A3 GRIN1 LCN8 RNF224 FAM69B LCN6 LOC101930307 MIR3621 C8G EDF1 CLIC3 AGPAT2 EXD3 TPRN EGFL7 MIR4479 LCNL1 PRR31 MAN1B1-AS1 TUBB4B LCN15 HSPC324 TMEM141 RNF208 SNHG7 STPG3 TMEM210 DPP7 MIR4292 LCN12 NPDC1 LCN10 TRAF2 NRARP RABL6 SAPCD2 CCDC183-AS1 LINC01451 NELFB C9orf172 FUT7 ANAPC2 SNORA17B C9orf139 SSNA1 SNORA17A LRRC26 FAM166A CCDC183 PHPT1 TMEM203 TOR4A LOC100128593 MAMDC4

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