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See other PTGDS CNV Assays ›
Gene Symbol
PTGDS
Assay Reference Genome
Location

Chr.9:136981355 on build GRCh38
Cytoband
9q34.3
Assay ID Hs03707895_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 5730

Gene Name:

 prostaglandin D2 synthase

Gene Aliases:

 L-PGDS, LPGDS, PDS, PGD2, PGDS, PGDS2

Location:

 Chr.9:136977504-136981742 on Build GRCh38

Assay Gene Location:

 Within Intron 6
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PTGDS NM_000954.5 NP_000945.3
AA621632.1
AI659247.1
AK075333.1
BC005939.1 AAH05939.1
BG037037.1
BM686612.1
M61900.2

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv615997 Chr.9:136977199 - 136984376 on Build GRCh38 Loss LCNL1 PTGDS
dgv13007n54 Chr.9:136966179 - 137173890 on Build GRCh38 Loss ENTPD2 NPDC1 TMEM210 C9orf142 UAP1L1 FUT7 MAN1B1-AS1 GRIN1 ABCA2 MIR3621 PRR31 MAN1B1 LCNL1 SAPCD2 PTGDS CLIC3 C9orf139 LOC101930307 LRRC26 DPP7
nsv615991 Chr.9:136972675 - 137011907 on Build GRCh38 Loss ABCA2 PRR31 LCNL1 C9orf142 PTGDS CLIC3
nsv615993 Chr.9:136975638 - 136983246 on Build GRCh38 Gain LCNL1 PTGDS
nsv818738 Chr.9:136740043 - 137009585 on Build GRCh38 Gain RABL6 LCN12 CCDC183 MIR4479 LCNL1 TRAF2 LCN15 LCN8 FBXW5 LCN10 EDF1 C9orf172 MIR4292 LCN6 MIR6722 C9orf142 TMEM141 PHPT1 C8G MAMDC4 ABCA2 CCDC183-AS1 PRR31 PTGDS CLIC3 LOC100128593
nsv524322 Chr.9:136795692 - 137482216 on Build GRCh38 Loss NPDC1 SLC34A3 MAN1B1-AS1 C9orf173-AS1 STPG3 NELFB ANAPC2 FBXW5 EDF1 C9orf172 MIR4292 MIR7114 FUT7 EXD3 MIR3621 PRR31 PNPLA7 SAPCD2 TPRN CLIC3 LOC101930307 CYSRT1 TMEM203 LRRC26 TOR4A ENTPD2 NOXA1 RABL6 LCN12 CCDC183 MIR4479 UAP1L1 GRIN1 SSNA1 MAN1B1 LCNL1 NSMF NRARP RNF224 ENTPD8 TRAF2 DPP7 TMEM210 C9orf142 NDOR1 RNF208 PHPT1 C8G MAMDC4 ABCA2 CCDC183-AS1 PTGDS C9orf139 TUBB4B FAM166A
nsv951206 Chr.9:136944849 - 137114548 on Build GRCh38 Deletion ENTPD2 NPDC1 LCN12 C9orf142 UAP1L1 FUT7 MAN1B1-AS1 C8G ABCA2 PRR31 MAN1B1 LCNL1 SAPCD2 PTGDS CLIC3 C9orf139 LOC101930307 DPP7
nsv469918 Chr.9:136359865 - 137173890 on Build GRCh38 Loss NPDC1 HSPC324 SNHG7 EGFL7 MAN1B1-AS1 CARD9 AGPAT2 FBXW5 LCN10 EDF1 C9orf172 MIR4292 LCN6 MIR4673 SDCCAG3 C9orf163 FUT7 MIR126 SNORA17B SNORA17A MIR3621 PRR31 INPP5E LINC01451 SAPCD2 CLIC3 LOC101930307 FAM69B LRRC26 LOC100128593 ENTPD2 RABL6 LCN12 CCDC183 MIR4479 SNAPC4 UAP1L1 GRIN1 MAN1B1 PMPCA LCNL1 SEC16A MIR4674 NOTCH1 TRAF2 LCN15 LCN8 DPP7 TMEM210 MIR6722 C9orf142 TMEM141 PHPT1 C8G MAMDC4 ABCA2 CCDC183-AS1 NALT1 PTGDS C9orf139 DNLZ
esv2422220 Chr.9:136584135 - 137350098 on Build GRCh38 Deletion NPDC1 SLC34A3 HSPC324 SNHG7 EGFL7 MAN1B1-AS1 C9orf173-AS1 STPG3 NELFB AGPAT2 ANAPC2 FBXW5 LCN10 EDF1 C9orf172 MIR4292 LCN6 FUT7 MIR126 SNORA17B SNORA17A EXD3 MIR3621 PRR31 LINC01451 SAPCD2 TPRN CLIC3 LOC101930307 FAM69B CYSRT1 TMEM203 LRRC26 LOC100128593 TOR4A ENTPD2 RABL6 LCN12 CCDC183 MIR4479 UAP1L1 GRIN1 SSNA1 MAN1B1 LCNL1 NRARP RNF224 TRAF2 LCN15 LCN8 DPP7 TMEM210 MIR6722 C9orf142 NDOR1 TMEM141 RNF208 PHPT1 C8G MAMDC4 ABCA2 CCDC183-AS1 PTGDS C9orf139 TUBB4B FAM166A

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