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See other PTGDS CNV Assays ›
Gene Symbol
PTGDS
Assay Reference Genome
Location

Chr.9:136981355 on build GRCh38
Cytoband
9q34.3
Assay ID Hs03707895_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 5730

Gene Name:

 prostaglandin D2 synthase

Gene Aliases:

 L-PGDS, LPGDS, PDS, PGD2, PGDS, PGDS2

Location:

 Chr.9:136977504-136981742 on Build GRCh38

Assay Gene Location:

 Within Intron 6
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PTGDS NM_000954.5 NP_000945.3
AA621632.1
AI659247.1
AK075333.1
BC005939.1 AAH05939.1
BG037037.1
BM686612.1
M61900.2

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv615997 Chr.9:136977199 - 136984376 on Build GRCh38 Loss LCNL1 PTGDS
nsv615991 Chr.9:136972675 - 137011907 on Build GRCh38 Loss PRR31 LCNL1 C9orf142 ABCA2 CLIC3 PTGDS
dgv13007n54 Chr.9:136966179 - 137173890 on Build GRCh38 Loss PRR31 LOC101930307 TMEM210 PTGDS LRRC26 GRIN1 LCNL1 C9orf142 MAN1B1-AS1 MIR3621 ABCA2 SAPCD2 FUT7 NPDC1 CLIC3 ENTPD2 DPP7 UAP1L1 C9orf139 MAN1B1
nsv615993 Chr.9:136975638 - 136983246 on Build GRCh38 Gain LCNL1 PTGDS
nsv818738 Chr.9:136740043 - 137009585 on Build GRCh38 Gain MIR6722 PTGDS C8G LCN10 FBXW5 MIR4479 LCNL1 C9orf172 MIR4292 ABCA2 RABL6 LCN15 PRR31 MAMDC4 CCDC183-AS1 TMEM141 PHPT1 C9orf142 CCDC183 LCN12 LCN6 LCN8 CLIC3 LOC100128593 EDF1 TRAF2
nsv524322 Chr.9:136795692 - 137482216 on Build GRCh38 Loss ENTPD8 LOC101930307 PTGDS C8G MIR4479 C9orf173-AS1 LCNL1 C9orf172 MIR4292 MIR3621 ABCA2 SAPCD2 RABL6 TUBB4B CYSRT1 DPP7 MIR7114 NDOR1 NRARP GRIN1 PHPT1 C9orf142 MAN1B1-AS1 TOR4A CCDC183 LCN12 FUT7 NPDC1 EXD3 ENTPD2 UAP1L1 C9orf139 RNF224 TMEM210 FBXW5 NSMF RNF208 ANAPC2 SLC34A3 PRR31 MAMDC4 SSNA1 NOXA1 CCDC183-AS1 FAM166A LRRC26 TMEM203 PNPLA7 NELFB STPG3 TPRN CLIC3 MAN1B1 EDF1 TRAF2
nsv951206 Chr.9:136944849 - 137114548 on Build GRCh38 Deletion PRR31 LOC101930307 PTGDS C8G LCNL1 C9orf142 MAN1B1-AS1 LCN12 ABCA2 SAPCD2 FUT7 NPDC1 CLIC3 ENTPD2 DPP7 UAP1L1 C9orf139 MAN1B1
nsv469918 Chr.9:136359865 - 137173890 on Build GRCh38 Loss MIR4674 SNORA17B LOC101930307 PTGDS C8G LCN10 FAM69B MIR4479 LCNL1 C9orf172 CARD9 MIR4292 MIR3621 ABCA2 SAPCD2 RABL6 DPP7 NOTCH1 LCN15 INPP5E SNAPC4 C9orf163 SEC16A HSPC324 SNHG7 GRIN1 PHPT1 C9orf142 MAN1B1-AS1 CCDC183 LCN12 NALT1 LCN6 FUT7 NPDC1 ENTPD2 LOC100128593 UAP1L1 C9orf139 EGFL7 AGPAT2 PMPCA SDCCAG3 MIR6722 TMEM210 FBXW5 DNLZ MIR126 PRR31 SNORA17A MIR4673 MAMDC4 CCDC183-AS1 TMEM141 LRRC26 LINC01451 LCN8 CLIC3 MAN1B1 EDF1 TRAF2
esv2422220 Chr.9:136584135 - 137350098 on Build GRCh38 Deletion SNORA17B LOC101930307 PTGDS C8G LCN10 FAM69B MIR4479 C9orf173-AS1 LCNL1 C9orf172 MIR4292 MIR3621 ABCA2 SAPCD2 RABL6 TUBB4B CYSRT1 DPP7 LCN15 NDOR1 HSPC324 NRARP SNHG7 GRIN1 PHPT1 C9orf142 MAN1B1-AS1 TOR4A CCDC183 LCN12 LCN6 FUT7 NPDC1 EXD3 ENTPD2 LOC100128593 UAP1L1 C9orf139 EGFL7 RNF224 AGPAT2 MIR6722 TMEM210 FBXW5 RNF208 MIR126 ANAPC2 SLC34A3 PRR31 SNORA17A MAMDC4 SSNA1 CCDC183-AS1 FAM166A TMEM141 LRRC26 TMEM203 NELFB STPG3 LINC01451 LCN8 TPRN CLIC3 MAN1B1 EDF1 TRAF2

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