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See other SAPCD2 CNV Assays ›
Gene Symbol
SAPCD2
Assay Reference Genome
Location

Chr.9:137069592 on build GRCh38
Cytoband
9q34.3
Assay ID Hs03712498_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 89958

Gene Name:

 suppressor APC domain containing 2

Gene Aliases:

 C9orf140, p42.3

Location:

 Chr.9:137062127-137070576 on Build GRCh38

Assay Gene Location:

 Within Intron 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SAPCD2 NM_178448.3 NP_848543.2
XM_011519180.2 XP_011517482.1
BC048267.1 AAH48267.1
BX332104.2
DQ150361.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv13007n54 Chr.9:136966179 - 137173890 on Build GRCh38 Loss LRRC26 LCNL1 CLIC3 C9orf139 MAN1B1 SAPCD2 ABCA2 MIR3621 GRIN1 ENTPD2 MAN1B1-AS1 FUT7 PTGDS PRR31 LOC101930307 NPDC1 UAP1L1 C9orf142 DPP7 TMEM210
nsv831761 Chr.9:137049674 - 137166473 on Build GRCh38 Loss ENTPD2 MAN1B1-AS1 MAN1B1 SAPCD2 LOC101930307 UAP1L1 GRIN1 DPP7
nsv616006 Chr.9:137057859 - 137083633 on Build GRCh38 Loss SAPCD2 UAP1L1
nsv524322 Chr.9:136795692 - 137482216 on Build GRCh38 Loss ENTPD8 RNF208 PHPT1 SAPCD2 ANAPC2 TPRN NOXA1 MIR4292 CCDC183-AS1 CCDC183 PTGDS NDOR1 LCN12 SLC34A3 PNPLA7 LCNL1 CLIC3 C9orf172 RNF224 MIR4479 MIR3621 GRIN1 ENTPD2 FAM166A C8G LOC101930307 NPDC1 MIR7114 DPP7 LRRC26 TOR4A EXD3 EDF1 FBXW5 TRAF2 ABCA2 SSNA1 MAN1B1-AS1 MAMDC4 FUT7 STPG3 TUBB4B CYSRT1 TMEM210 RABL6 NELFB C9orf139 MAN1B1 NRARP TMEM203 NSMF PRR31 UAP1L1 C9orf173-AS1 C9orf142
nsv951206 Chr.9:136944849 - 137114548 on Build GRCh38 Deletion LCNL1 CLIC3 C9orf139 MAN1B1 SAPCD2 ABCA2 ENTPD2 MAN1B1-AS1 FUT7 PTGDS PRR31 LCN12 C8G LOC101930307 NPDC1 UAP1L1 C9orf142 DPP7
nsv469918 Chr.9:136359865 - 137173890 on Build GRCh38 Loss LCN10 SNAPC4 PHPT1 SAPCD2 LCN8 MIR4292 CCDC183-AS1 CARD9 SNHG7 LINC01451 CCDC183 PTGDS PMPCA LCN12 DNLZ LCN15 EGFL7 LCNL1 CLIC3 MIR4673 C9orf172 MIR126 MIR4479 SNORA17A MIR3621 FAM69B NALT1 GRIN1 SEC16A ENTPD2 C8G LOC101930307 NPDC1 MIR6722 DPP7 LRRC26 EDF1 FBXW5 LCN6 TRAF2 ABCA2 AGPAT2 TMEM141 MAN1B1-AS1 SDCCAG3 MAMDC4 FUT7 SNORA17B INPP5E HSPC324 LOC100128593 TMEM210 NOTCH1 RABL6 C9orf139 MAN1B1 MIR4674 PRR31 UAP1L1 C9orf142 C9orf163
esv2761561 Chr.9:137030185 - 137191593 on Build GRCh38 Gain LRRC26 C9orf139 MAN1B1 SAPCD2 ANAPC2 MIR3621 GRIN1 SSNA1 ENTPD2 MAN1B1-AS1 FUT7 LOC101930307 NPDC1 UAP1L1 DPP7 TMEM210
nsv616005 Chr.9:137036493 - 137173890 on Build GRCh38 Loss LRRC26 C9orf139 MAN1B1 SAPCD2 MIR3621 GRIN1 ENTPD2 MAN1B1-AS1 LOC101930307 NPDC1 UAP1L1 DPP7 TMEM210
esv2422220 Chr.9:136584135 - 137350098 on Build GRCh38 Deletion LCN10 RNF208 PHPT1 SAPCD2 ANAPC2 TPRN LCN8 MIR4292 CCDC183-AS1 SNHG7 LINC01451 CCDC183 PTGDS NDOR1 LCN12 SLC34A3 LCN15 EGFL7 LCNL1 CLIC3 C9orf172 RNF224 MIR126 MIR4479 SNORA17A MIR3621 FAM69B GRIN1 ENTPD2 FAM166A C8G LOC101930307 NPDC1 MIR6722 DPP7 LRRC26 TOR4A EXD3 EDF1 FBXW5 LCN6 TRAF2 ABCA2 AGPAT2 TMEM141 SSNA1 MAN1B1-AS1 MAMDC4 FUT7 STPG3 TUBB4B SNORA17B CYSRT1 HSPC324 LOC100128593 TMEM210 RABL6 NELFB C9orf139 MAN1B1 NRARP TMEM203 PRR31 UAP1L1 C9orf173-AS1 C9orf142
nsv982354 Chr.9:137057355 - 137073859 on Build GRCh38 Duplication SAPCD2

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

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