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See other SAPCD2 CNV Assays ›
Gene Symbol
SAPCD2
Assay Reference Genome
Location

Chr.9:137069592 on build GRCh38
Cytoband
9q34.3
Assay ID Hs03712498_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 89958

Gene Name:

 suppressor APC domain containing 2

Gene Aliases:

 C9orf140, p42.3

Location:

 Chr.9:137062127-137070576 on Build GRCh38

Assay Gene Location:

 Within Intron 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SAPCD2 NM_178448.3 NP_848543.2
XM_011519180.2 XP_011517482.1
BC048267.1 AAH48267.1
BX332104.2
DQ150361.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv13007n54 Chr.9:136966179 - 137173890 on Build GRCh38 Loss LCNL1 C9orf142 PRR31 ABCA2 LRRC26 PTGDS MIR3621 MAN1B1 MAN1B1-AS1 SAPCD2 C9orf139 FUT7 CLIC3 ENTPD2 NPDC1 TMEM210 UAP1L1 GRIN1 DPP7 LOC101930307
nsv831761 Chr.9:137049674 - 137166473 on Build GRCh38 Loss MAN1B1-AS1 SAPCD2 ENTPD2 UAP1L1 GRIN1 DPP7 LOC101930307 MAN1B1
nsv616006 Chr.9:137057859 - 137083633 on Build GRCh38 Loss SAPCD2 UAP1L1
nsv524322 Chr.9:136795692 - 137482216 on Build GRCh38 Loss PRR31 MIR4292 MAMDC4 LCN12 EXD3 ENTPD8 RNF208 MIR3621 SAPCD2 FAM166A FUT7 C8G CCDC183-AS1 NSMF TUBB4B C9orf172 DPP7 STPG3 MIR4479 LCNL1 FBXW5 NRARP SSNA1 CCDC183 MAN1B1-AS1 TMEM203 C9orf139 ENTPD2 C9orf173-AS1 PNPLA7 NPDC1 NOXA1 TMEM210 GRIN1 TOR4A ABCA2 ANAPC2 TPRN RABL6 PTGDS EDF1 NELFB CLIC3 RNF224 TRAF2 UAP1L1 LOC101930307 C9orf142 CYSRT1 LRRC26 MIR7114 MAN1B1 PHPT1 NDOR1 SLC34A3
nsv951206 Chr.9:136944849 - 137114548 on Build GRCh38 Deletion LCNL1 C9orf142 PRR31 ABCA2 PTGDS LCN12 MAN1B1 MAN1B1-AS1 SAPCD2 C9orf139 FUT7 C8G CLIC3 ENTPD2 NPDC1 UAP1L1 DPP7 LOC101930307
nsv469918 Chr.9:136359865 - 137173890 on Build GRCh38 Loss INPP5E PRR31 MIR4292 C9orf163 MAMDC4 LCN12 MIR3621 TMEM141 SAPCD2 FUT7 C8G LOC100128593 LCN15 CCDC183-AS1 SNORA17A NALT1 MIR126 C9orf172 DPP7 MIR4479 LCNL1 SNAPC4 FBXW5 MIR6722 CCDC183 MAN1B1-AS1 SEC16A C9orf139 AGPAT2 ENTPD2 NPDC1 TMEM210 NOTCH1 GRIN1 ABCA2 RABL6 PTGDS EDF1 LCN6 SNHG7 SNORA17B CLIC3 CARD9 TRAF2 UAP1L1 MIR4673 LOC101930307 MIR4674 C9orf142 LCN10 LRRC26 SDCCAG3 EGFL7 PMPCA LCN8 MAN1B1 DNLZ PHPT1 FAM69B HSPC324 LINC01451
nsv616005 Chr.9:137036493 - 137173890 on Build GRCh38 Loss LRRC26 MIR3621 MAN1B1 MAN1B1-AS1 SAPCD2 C9orf139 ENTPD2 NPDC1 TMEM210 UAP1L1 GRIN1 DPP7 LOC101930307
esv2761561 Chr.9:137030185 - 137191593 on Build GRCh38 Gain ANAPC2 LRRC26 SSNA1 MIR3621 MAN1B1 MAN1B1-AS1 SAPCD2 C9orf139 FUT7 ENTPD2 NPDC1 TMEM210 UAP1L1 GRIN1 DPP7 LOC101930307
esv2422220 Chr.9:136584135 - 137350098 on Build GRCh38 Deletion PRR31 MIR4292 MAMDC4 LCN12 EXD3 RNF208 MIR3621 TMEM141 SAPCD2 FAM166A FUT7 C8G LOC100128593 LCN15 CCDC183-AS1 SNORA17A TUBB4B MIR126 C9orf172 DPP7 STPG3 MIR4479 LCNL1 FBXW5 NRARP SSNA1 MIR6722 CCDC183 MAN1B1-AS1 TMEM203 C9orf139 AGPAT2 ENTPD2 C9orf173-AS1 NPDC1 TMEM210 GRIN1 TOR4A ABCA2 ANAPC2 TPRN RABL6 PTGDS EDF1 LCN6 NELFB SNHG7 SNORA17B CLIC3 RNF224 TRAF2 UAP1L1 LOC101930307 C9orf142 CYSRT1 LCN10 LRRC26 EGFL7 LCN8 MAN1B1 PHPT1 FAM69B NDOR1 HSPC324 SLC34A3 LINC01451
nsv982354 Chr.9:137057355 - 137073859 on Build GRCh38 Duplication SAPCD2

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

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