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See other SAPCD2 CNV Assays ›
Gene Symbol
SAPCD2
Assay Reference Genome
Location

Chr.9:137069234 on build GRCh38
Cytoband
9q34.3
Assay ID Hs03714413_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 89958

Gene Name:

 suppressor APC domain containing 2

Gene Aliases:

 C9orf140, p42.3

Location:

 Chr.9:137062127-137070576 on Build GRCh38

Assay Gene Location:

 Within Intron 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SAPCD2 NM_178448.3 NP_848543.2
XM_011519180.2 XP_011517482.1
BC048267.1 AAH48267.1
BX332104.2
DQ150361.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv13007n54 Chr.9:136966179 - 137173890 on Build GRCh38 Loss C9orf142 LCNL1 PTGDS ENTPD2 CLIC3 TMEM210 MAN1B1-AS1 MIR3621 LOC101930307 DPP7 C9orf139 GRIN1 PRR31 UAP1L1 SAPCD2 LRRC26 MAN1B1 FUT7 ABCA2 NPDC1
nsv831761 Chr.9:137049674 - 137166473 on Build GRCh38 Loss LOC101930307 DPP7 ENTPD2 GRIN1 MAN1B1-AS1 UAP1L1 SAPCD2 MAN1B1
nsv616006 Chr.9:137057859 - 137083633 on Build GRCh38 Loss UAP1L1 SAPCD2
nsv524322 Chr.9:136795692 - 137482216 on Build GRCh38 Loss NELFB RABL6 NOXA1 ANAPC2 NDOR1 EXD3 TRAF2 C9orf139 FAM166A STPG3 LCN12 SLC34A3 NPDC1 CCDC183-AS1 ENTPD8 LCNL1 PTGDS MAN1B1-AS1 MIR3621 CCDC183 PHPT1 RNF208 UAP1L1 ABCA2 C9orf142 TOR4A FBXW5 SSNA1 ENTPD2 CLIC3 NSMF LOC101930307 CYSRT1 MIR7114 DPP7 MIR4479 NRARP C8G MIR4292 PRR31 SAPCD2 C9orf172 MAN1B1 FUT7 MAMDC4 EDF1 TPRN TMEM210 TMEM203 PNPLA7 RNF224 GRIN1 LRRC26 TUBB4B C9orf173-AS1
nsv951206 Chr.9:136944849 - 137114548 on Build GRCh38 Deletion C9orf142 LCNL1 PTGDS ENTPD2 CLIC3 MAN1B1-AS1 LOC101930307 DPP7 C9orf139 C8G PRR31 UAP1L1 SAPCD2 MAN1B1 LCN12 FUT7 ABCA2 NPDC1
nsv469918 Chr.9:136359865 - 137173890 on Build GRCh38 Loss C9orf163 SNAPC4 LCN10 RABL6 MIR4673 AGPAT2 TRAF2 SNORA17A C9orf139 CARD9 LCN12 NPDC1 CCDC183-AS1 LCNL1 PTGDS DNLZ EGFL7 MAN1B1-AS1 MIR3621 SNORA17B TMEM141 CCDC183 SEC16A PMPCA PHPT1 UAP1L1 LOC100128593 ABCA2 MIR4674 C9orf142 FBXW5 HSPC324 NOTCH1 ENTPD2 CLIC3 LCN15 LOC101930307 LCN6 NALT1 DPP7 MIR4479 FAM69B C8G MIR4292 INPP5E PRR31 SAPCD2 C9orf172 MAN1B1 MIR6722 MIR126 FUT7 MAMDC4 SNHG7 SDCCAG3 EDF1 TMEM210 LCN8 LINC01451 GRIN1 LRRC26
nsv616005 Chr.9:137036493 - 137173890 on Build GRCh38 Loss ENTPD2 TMEM210 MAN1B1-AS1 MIR3621 LOC101930307 DPP7 C9orf139 GRIN1 UAP1L1 SAPCD2 LRRC26 MAN1B1 NPDC1
esv2761561 Chr.9:137030185 - 137191593 on Build GRCh38 Gain SSNA1 ENTPD2 TMEM210 MAN1B1-AS1 MIR3621 ANAPC2 LOC101930307 DPP7 C9orf139 GRIN1 UAP1L1 SAPCD2 LRRC26 MAN1B1 FUT7 NPDC1
esv2422220 Chr.9:136584135 - 137350098 on Build GRCh38 Deletion NELFB LCN10 RABL6 ANAPC2 NDOR1 EXD3 AGPAT2 TRAF2 SNORA17A C9orf139 FAM166A STPG3 LCN12 SLC34A3 NPDC1 CCDC183-AS1 LCNL1 PTGDS EGFL7 MAN1B1-AS1 MIR3621 SNORA17B TMEM141 CCDC183 PHPT1 RNF208 UAP1L1 LOC100128593 ABCA2 C9orf142 TOR4A FBXW5 SSNA1 HSPC324 ENTPD2 CLIC3 LCN15 LOC101930307 LCN6 CYSRT1 DPP7 MIR4479 FAM69B NRARP C8G MIR4292 PRR31 SAPCD2 C9orf172 MAN1B1 MIR6722 MIR126 FUT7 MAMDC4 SNHG7 EDF1 TPRN TMEM210 TMEM203 LCN8 LINC01451 RNF224 GRIN1 LRRC26 TUBB4B C9orf173-AS1
nsv982354 Chr.9:137057355 - 137073859 on Build GRCh38 Duplication SAPCD2

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

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