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See other SAPCD2 CNV Assays ›
Gene Symbol
SAPCD2
Assay Reference Genome
Location

Chr.9:137069234 on build GRCh38
Cytoband
9q34.3
Assay ID Hs03714413_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 89958

Gene Name:

 suppressor APC domain containing 2

Gene Aliases:

 C9orf140, p42.3

Location:

 Chr.9:137062127-137070576 on Build GRCh38

Assay Gene Location:

 Within Intron 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SAPCD2 NM_178448.3 NP_848543.2
XM_011519180.2 XP_011517482.1
BC048267.1 AAH48267.1
BX332104.2
DQ150361.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv13007n54 Chr.9:136966179 - 137173890 on Build GRCh38 Loss C9orf139 MAN1B1-AS1 LCNL1 TMEM210 PTGDS GRIN1 DPP7 LRRC26 SAPCD2 MAN1B1 UAP1L1 ABCA2 MIR3621 ENTPD2 PRR31 FUT7 C9orf142 NPDC1 CLIC3 LOC101930307
nsv831761 Chr.9:137049674 - 137166473 on Build GRCh38 Loss MAN1B1 MAN1B1-AS1 UAP1L1 ENTPD2 GRIN1 DPP7 SAPCD2 LOC101930307
nsv616006 Chr.9:137057859 - 137083633 on Build GRCh38 Loss UAP1L1 SAPCD2
nsv524322 Chr.9:136795692 - 137482216 on Build GRCh38 Loss C9orf172 C9orf139 MAN1B1-AS1 PNPLA7 RABL6 TMEM203 LRRC26 SAPCD2 CYSRT1 MIR4292 RNF224 ABCA2 EXD3 PRR31 NDOR1 LOC101930307 SSNA1 NELFB PTGDS FBXW5 DPP7 C8G UAP1L1 TUBB4B C9orf142 MIR7114 CLIC3 RNF208 TOR4A GRIN1 C9orf173-AS1 CCDC183 MAN1B1 MAMDC4 MIR4479 NOXA1 FUT7 ENTPD8 TPRN STPG3 PHPT1 FAM166A EDF1 LCNL1 TMEM210 LCN12 CCDC183-AS1 TRAF2 ANAPC2 SLC34A3 MIR3621 ENTPD2 NSMF NRARP NPDC1
nsv951206 Chr.9:136944849 - 137114548 on Build GRCh38 Deletion C9orf139 MAN1B1-AS1 LCNL1 LCN12 PTGDS DPP7 SAPCD2 MAN1B1 C8G UAP1L1 ABCA2 ENTPD2 PRR31 FUT7 C9orf142 NPDC1 CLIC3 LOC101930307
nsv469918 Chr.9:136359865 - 137173890 on Build GRCh38 Loss C9orf172 C9orf139 MAN1B1-AS1 SNHG7 TMEM141 RABL6 NALT1 SNAPC4 LINC01451 SEC16A LRRC26 SAPCD2 MIR4674 SNORA17B LOC100128593 MIR4292 ABCA2 PRR31 AGPAT2 LCN6 LOC101930307 EGFL7 C9orf163 PMPCA PTGDS FBXW5 DPP7 MIR4673 C8G UAP1L1 FAM69B SDCCAG3 C9orf142 NOTCH1 CLIC3 SNORA17A GRIN1 CCDC183 MAN1B1 MAMDC4 MIR4479 MIR126 LCN10 FUT7 LCN8 PHPT1 EDF1 LCNL1 TMEM210 LCN12 INPP5E CCDC183-AS1 TRAF2 LCN15 MIR3621 ENTPD2 MIR6722 NPDC1 DNLZ HSPC324 CARD9
esv2761561 Chr.9:137030185 - 137191593 on Build GRCh38 Gain SSNA1 C9orf139 MAN1B1-AS1 TMEM210 GRIN1 DPP7 LRRC26 SAPCD2 MAN1B1 UAP1L1 ANAPC2 MIR3621 ENTPD2 FUT7 NPDC1 LOC101930307
nsv616005 Chr.9:137036493 - 137173890 on Build GRCh38 Loss C9orf139 MAN1B1-AS1 TMEM210 GRIN1 DPP7 LRRC26 SAPCD2 MAN1B1 UAP1L1 MIR3621 ENTPD2 NPDC1 LOC101930307
esv2422220 Chr.9:136584135 - 137350098 on Build GRCh38 Deletion C9orf172 C9orf139 MAN1B1-AS1 SNHG7 TMEM141 RABL6 TMEM203 LINC01451 LRRC26 SAPCD2 CYSRT1 SNORA17B LOC100128593 MIR4292 RNF224 ABCA2 EXD3 PRR31 AGPAT2 NDOR1 LCN6 LOC101930307 SSNA1 NELFB EGFL7 PTGDS FBXW5 DPP7 C8G UAP1L1 FAM69B TUBB4B C9orf142 CLIC3 RNF208 SNORA17A TOR4A GRIN1 C9orf173-AS1 CCDC183 MAN1B1 MAMDC4 MIR4479 MIR126 LCN10 FUT7 TPRN STPG3 LCN8 PHPT1 FAM166A EDF1 LCNL1 TMEM210 LCN12 CCDC183-AS1 TRAF2 LCN15 ANAPC2 SLC34A3 MIR3621 ENTPD2 NRARP MIR6722 NPDC1 HSPC324
nsv982354 Chr.9:137057355 - 137073859 on Build GRCh38 Duplication SAPCD2

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

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