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See other SAPCD2 CNV Assays ›
Gene Symbol
SAPCD2
Assay Reference Genome
Location

Chr.9:137068854 on build GRCh38
Cytoband
9q34.3
Assay ID Hs03716443_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 89958

Gene Name:

 suppressor APC domain containing 2

Gene Aliases:

 C9orf140, p42.3

Location:

 Chr.9:137062127-137070576 on Build GRCh38

Assay Gene Location:

 Within Intron 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SAPCD2 NM_178448.3 NP_848543.2
XM_011519180.2 XP_011517482.1
BC048267.1 AAH48267.1
BX332104.2
DQ150361.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv13007n54 Chr.9:136966179 - 137173890 on Build GRCh38 Loss PRR31 DPP7 MAN1B1-AS1 TMEM210 LCNL1 SAPCD2 GRIN1 LOC101930307 MIR3621 CLIC3 ABCA2 FUT7 C9orf139 C9orf142 LRRC26 PTGDS NPDC1 MAN1B1 UAP1L1 ENTPD2
nsv831761 Chr.9:137049674 - 137166473 on Build GRCh38 Loss DPP7 MAN1B1-AS1 SAPCD2 GRIN1 LOC101930307 MAN1B1 UAP1L1 ENTPD2
nsv616006 Chr.9:137057859 - 137083633 on Build GRCh38 Loss SAPCD2 UAP1L1
nsv524322 Chr.9:136795692 - 137482216 on Build GRCh38 Loss CYSRT1 LCNL1 PHPT1 MIR7114 LOC101930307 MIR4479 MIR3621 LCN12 PNPLA7 TOR4A FUT7 NOXA1 C9orf139 NDOR1 C9orf142 C8G PTGDS CCDC183 UAP1L1 ENTPD2 NRARP PRR31 MAN1B1-AS1 TMEM203 EDF1 TMEM210 SAPCD2 FAM166A TPRN NSMF MIR4292 EXD3 C9orf172 LRRC26 RNF208 ENTPD8 ANAPC2 DPP7 CLIC3 SSNA1 STPG3 ABCA2 C9orf173-AS1 RABL6 GRIN1 NELFB TUBB4B SLC34A3 TRAF2 CCDC183-AS1 RNF224 MAMDC4 FBXW5 NPDC1 MAN1B1
nsv951206 Chr.9:136944849 - 137114548 on Build GRCh38 Deletion PRR31 DPP7 MAN1B1-AS1 LCNL1 SAPCD2 LOC101930307 LCN12 CLIC3 ABCA2 FUT7 C9orf139 C9orf142 C8G PTGDS NPDC1 MAN1B1 UAP1L1 ENTPD2
nsv469918 Chr.9:136359865 - 137173890 on Build GRCh38 Loss TMEM141 LCNL1 SDCCAG3 NOTCH1 PHPT1 LOC101930307 MIR4479 MIR3621 LCN12 FUT7 C9orf163 C9orf139 LCN8 C9orf142 C8G LCN15 PTGDS CCDC183 LCN10 UAP1L1 ENTPD2 PRR31 MAN1B1-AS1 EDF1 TMEM210 SAPCD2 MIR4292 SNHG7 PMPCA HSPC324 C9orf172 LRRC26 SNORA17A LINC01451 SNAPC4 FAM69B INPP5E DPP7 MIR4673 LOC100128593 MIR6722 LCN6 CLIC3 ABCA2 DNLZ AGPAT2 CARD9 SEC16A RABL6 NALT1 GRIN1 TRAF2 SNORA17B CCDC183-AS1 MIR4674 MAMDC4 FBXW5 EGFL7 NPDC1 MAN1B1 MIR126
nsv616005 Chr.9:137036493 - 137173890 on Build GRCh38 Loss DPP7 MAN1B1-AS1 TMEM210 SAPCD2 GRIN1 LOC101930307 MIR3621 C9orf139 LRRC26 NPDC1 MAN1B1 UAP1L1 ENTPD2
esv2761561 Chr.9:137030185 - 137191593 on Build GRCh38 Gain DPP7 MAN1B1-AS1 TMEM210 SAPCD2 GRIN1 LOC101930307 MIR3621 SSNA1 FUT7 C9orf139 LRRC26 ANAPC2 NPDC1 MAN1B1 UAP1L1 ENTPD2
esv2422220 Chr.9:136584135 - 137350098 on Build GRCh38 Deletion TMEM141 CYSRT1 LCNL1 PHPT1 LOC101930307 MIR4479 MIR3621 LCN12 TOR4A FUT7 C9orf139 LCN8 NDOR1 C9orf142 C8G LCN15 PTGDS CCDC183 LCN10 UAP1L1 ENTPD2 NRARP PRR31 MAN1B1-AS1 TMEM203 EDF1 TMEM210 SAPCD2 FAM166A TPRN MIR4292 SNHG7 EXD3 HSPC324 C9orf172 LRRC26 SNORA17A LINC01451 RNF208 ANAPC2 FAM69B DPP7 LOC100128593 MIR6722 LCN6 CLIC3 SSNA1 STPG3 ABCA2 AGPAT2 C9orf173-AS1 RABL6 GRIN1 NELFB TUBB4B SLC34A3 TRAF2 SNORA17B CCDC183-AS1 RNF224 MAMDC4 FBXW5 EGFL7 NPDC1 MAN1B1 MIR126
nsv982354 Chr.9:137057355 - 137073859 on Build GRCh38 Duplication SAPCD2

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

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