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See other SAPCD2 CNV Assays ›
Gene Symbol
SAPCD2
Assay Reference Genome
Location

Chr.9:137068854 on build GRCh38
Cytoband
9q34.3
Assay ID Hs03716443_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 89958

Gene Name:

 suppressor APC domain containing 2

Gene Aliases:

 C9orf140, p42.3

Location:

 Chr.9:137062127-137070576 on Build GRCh38

Assay Gene Location:

 Within Intron 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SAPCD2 NM_178448.3 NP_848543.2
XM_011519180.2 XP_011517482.1
BC048267.1 AAH48267.1
BX332104.2
DQ150361.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv13007n54 Chr.9:136966179 - 137173890 on Build GRCh38 Loss C9orf139 MIR3621 CLIC3 LRRC26 ABCA2 C9orf142 NPDC1 PTGDS UAP1L1 TMEM210 LOC101930307 DPP7 PRR31 FUT7 ENTPD2 MAN1B1 MAN1B1-AS1 SAPCD2 GRIN1 LCNL1
nsv831761 Chr.9:137049674 - 137166473 on Build GRCh38 Loss DPP7 ENTPD2 MAN1B1 MAN1B1-AS1 SAPCD2 UAP1L1 GRIN1 LOC101930307
nsv616006 Chr.9:137057859 - 137083633 on Build GRCh38 Loss SAPCD2 UAP1L1
nsv524322 Chr.9:136795692 - 137482216 on Build GRCh38 Loss SSNA1 CLIC3 ANAPC2 LRRC26 SLC34A3 MIR4479 C9orf173-AS1 NDOR1 PRR31 FUT7 MAN1B1-AS1 SAPCD2 EDF1 LCN12 GRIN1 MIR3621 ENTPD8 STPG3 C9orf142 TMEM203 MIR7114 PTGDS RNF208 TUBB4B DPP7 TOR4A MAN1B1 PHPT1 NELFB RNF224 LCNL1 C9orf139 MIR4292 ABCA2 UAP1L1 LOC101930307 CCDC183-AS1 ENTPD2 RABL6 C9orf172 PNPLA7 NRARP NOXA1 EXD3 C8G CCDC183 NPDC1 TRAF2 TMEM210 FAM166A NSMF MAMDC4 FBXW5 CYSRT1 TPRN
nsv951206 Chr.9:136944849 - 137114548 on Build GRCh38 Deletion C9orf139 CLIC3 ABCA2 C8G C9orf142 NPDC1 PTGDS UAP1L1 LOC101930307 DPP7 PRR31 FUT7 ENTPD2 MAN1B1 MAN1B1-AS1 SAPCD2 LCN12 LCNL1
nsv469918 Chr.9:136359865 - 137173890 on Build GRCh38 Loss CLIC3 LRRC26 MIR4479 MIR4673 LCN15 C9orf163 LCN6 PRR31 EGFL7 INPP5E FUT7 MAN1B1-AS1 LINC01451 SAPCD2 EDF1 LCN12 SNHG7 GRIN1 TMEM141 MIR3621 FAM69B SNORA17B SDCCAG3 C9orf142 PTGDS DPP7 SNAPC4 MAN1B1 PHPT1 CARD9 MIR4674 LCNL1 C9orf139 MIR4292 ABCA2 MIR6722 UAP1L1 LOC101930307 LCN8 CCDC183-AS1 ENTPD2 RABL6 C9orf172 SNORA17A NOTCH1 HSPC324 NALT1 C8G CCDC183 AGPAT2 NPDC1 MIR126 TRAF2 TMEM210 MAMDC4 FBXW5 PMPCA SEC16A LCN10 DNLZ LOC100128593
esv2761561 Chr.9:137030185 - 137191593 on Build GRCh38 Gain SSNA1 C9orf139 MIR3621 ANAPC2 LRRC26 NPDC1 UAP1L1 TMEM210 LOC101930307 DPP7 FUT7 ENTPD2 MAN1B1 MAN1B1-AS1 SAPCD2 GRIN1
nsv616005 Chr.9:137036493 - 137173890 on Build GRCh38 Loss C9orf139 MIR3621 LRRC26 NPDC1 UAP1L1 TMEM210 LOC101930307 DPP7 ENTPD2 MAN1B1 MAN1B1-AS1 SAPCD2 GRIN1
esv2422220 Chr.9:136584135 - 137350098 on Build GRCh38 Deletion SSNA1 CLIC3 ANAPC2 LRRC26 SLC34A3 MIR4479 C9orf173-AS1 LCN15 NDOR1 LCN6 PRR31 EGFL7 FUT7 MAN1B1-AS1 LINC01451 SAPCD2 EDF1 LCN12 SNHG7 GRIN1 TMEM141 MIR3621 FAM69B STPG3 SNORA17B C9orf142 TMEM203 PTGDS RNF208 TUBB4B DPP7 TOR4A MAN1B1 PHPT1 NELFB RNF224 LCNL1 C9orf139 MIR4292 ABCA2 MIR6722 UAP1L1 LOC101930307 LCN8 CCDC183-AS1 ENTPD2 RABL6 C9orf172 SNORA17A NRARP EXD3 HSPC324 C8G CCDC183 AGPAT2 NPDC1 MIR126 TRAF2 TMEM210 FAM166A MAMDC4 FBXW5 CYSRT1 LCN10 TPRN LOC100128593
nsv982354 Chr.9:137057355 - 137073859 on Build GRCh38 Duplication SAPCD2

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

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