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See other SAPCD2 CNV Assays ›
Gene Symbol
SAPCD2
Assay Reference Genome
Location

Chr.9:137070585 on build GRCh38
Cytoband
9q34.3
Assay ID Hs03716675_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 89958

Gene Name:

 suppressor APC domain containing 2

Gene Aliases:

 C9orf140, p42.3

Location:

 Chr.9:137062127-137070576 on Build GRCh38

Assay Gene Location:

 Overlaps - Exon 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SAPCD2 NM_178448.3 NP_848543.2
XM_011519180.2 XP_011517482.1
BC048267.1 AAH48267.1
DQ150361.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv13007n54 Chr.9:136966179 - 137173890 on Build GRCh38 Loss MIR3621 GRIN1 NPDC1 TMEM210 UAP1L1 LOC101930307 ABCA2 CLIC3 SAPCD2 C9orf139 ENTPD2 PRR31 FUT7 MAN1B1-AS1 MAN1B1 LRRC26 C9orf142 LCNL1 PTGDS DPP7
nsv831761 Chr.9:137049674 - 137166473 on Build GRCh38 Loss GRIN1 ENTPD2 UAP1L1 LOC101930307 MAN1B1-AS1 MAN1B1 SAPCD2 DPP7
nsv616006 Chr.9:137057859 - 137083633 on Build GRCh38 Loss UAP1L1 SAPCD2
nsv524322 Chr.9:136795692 - 137482216 on Build GRCh38 Loss RNF208 TMEM210 EXD3 C9orf139 C9orf173-AS1 ENTPD8 MIR4479 SSNA1 TPRN C9orf142 LCNL1 NPDC1 FBXW5 STPG3 TMEM203 MIR7114 EDF1 CYSRT1 TOR4A C9orf172 FUT7 PTGDS MIR3621 MIR4292 TRAF2 C8G UAP1L1 ABCA2 MAMDC4 NOXA1 LCN12 PNPLA7 NSMF SLC34A3 ENTPD2 PRR31 NDOR1 RNF224 LRRC26 CCDC183-AS1 DPP7 GRIN1 RABL6 TUBB4B LOC101930307 CCDC183 NRARP FAM166A CLIC3 SAPCD2 NELFB PHPT1 MAN1B1-AS1 MAN1B1 ANAPC2
nsv951206 Chr.9:136944849 - 137114548 on Build GRCh38 Deletion NPDC1 C8G UAP1L1 LOC101930307 ABCA2 LCN12 CLIC3 SAPCD2 C9orf139 ENTPD2 PRR31 FUT7 MAN1B1-AS1 MAN1B1 C9orf142 LCNL1 PTGDS DPP7
nsv469918 Chr.9:136359865 - 137173890 on Build GRCh38 Loss LCN10 PMPCA MIR4673 TMEM210 LCN8 C9orf139 MIR4479 NALT1 C9orf142 LCNL1 MIR126 NPDC1 FBXW5 DNLZ LINC01451 MIR6722 SNORA17A LCN6 TMEM141 EDF1 SNAPC4 MIR4674 C9orf172 FUT7 LOC100128593 SNHG7 SEC16A LCN15 PTGDS MIR3621 MIR4292 TRAF2 C8G UAP1L1 ABCA2 MAMDC4 LCN12 CARD9 INPP5E SDCCAG3 ENTPD2 PRR31 LRRC26 EGFL7 CCDC183-AS1 HSPC324 DPP7 GRIN1 RABL6 LOC101930307 CCDC183 C9orf163 CLIC3 SAPCD2 NOTCH1 SNORA17B PHPT1 MAN1B1-AS1 AGPAT2 MAN1B1 FAM69B
nsv616005 Chr.9:137036493 - 137173890 on Build GRCh38 Loss MIR3621 GRIN1 NPDC1 TMEM210 UAP1L1 LOC101930307 SAPCD2 C9orf139 ENTPD2 MAN1B1-AS1 MAN1B1 LRRC26 DPP7
esv2761561 Chr.9:137030185 - 137191593 on Build GRCh38 Gain MIR3621 GRIN1 NPDC1 TMEM210 UAP1L1 LOC101930307 SAPCD2 C9orf139 ENTPD2 SSNA1 FUT7 MAN1B1-AS1 MAN1B1 LRRC26 ANAPC2 DPP7
esv2422220 Chr.9:136584135 - 137350098 on Build GRCh38 Deletion RNF208 LCN10 TMEM210 EXD3 LCN8 C9orf139 C9orf173-AS1 MIR4479 SSNA1 TPRN C9orf142 LCNL1 MIR126 NPDC1 FBXW5 STPG3 LINC01451 TMEM203 MIR6722 SNORA17A LCN6 TMEM141 EDF1 CYSRT1 TOR4A C9orf172 FUT7 LOC100128593 SNHG7 LCN15 PTGDS MIR3621 MIR4292 TRAF2 C8G UAP1L1 ABCA2 MAMDC4 LCN12 SLC34A3 ENTPD2 PRR31 NDOR1 RNF224 LRRC26 EGFL7 CCDC183-AS1 HSPC324 DPP7 GRIN1 RABL6 TUBB4B LOC101930307 CCDC183 NRARP FAM166A CLIC3 SAPCD2 NELFB SNORA17B PHPT1 MAN1B1-AS1 AGPAT2 MAN1B1 FAM69B ANAPC2
nsv982354 Chr.9:137057355 - 137073859 on Build GRCh38 Duplication SAPCD2

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

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