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See other SAPCD2 CNV Assays ›
Gene Symbol
SAPCD2
Assay Reference Genome
Location

Chr.9:137070585 on build GRCh38
Cytoband
9q34.3
Assay ID Hs03716675_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 89958

Gene Name:

 suppressor APC domain containing 2

Gene Aliases:

 C9orf140, p42.3

Location:

 Chr.9:137062127-137070576 on Build GRCh38

Assay Gene Location:

 Overlaps - Exon 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SAPCD2 NM_178448.3 NP_848543.2
XM_011519180.2 XP_011517482.1
BC048267.1 AAH48267.1
DQ150361.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv13007n54 Chr.9:136966179 - 137173890 on Build GRCh38 Loss CLIC3 PRR31 MAN1B1 LCNL1 C9orf142 TMEM210 NPDC1 DPP7 SAPCD2 PTGDS UAP1L1 MIR3621 LRRC26 C9orf139 ABCA2 GRIN1 LOC101930307 FUT7 MAN1B1-AS1 ENTPD2
nsv831761 Chr.9:137049674 - 137166473 on Build GRCh38 Loss UAP1L1 MAN1B1 GRIN1 LOC101930307 DPP7 MAN1B1-AS1 ENTPD2 SAPCD2
nsv616006 Chr.9:137057859 - 137083633 on Build GRCh38 Loss UAP1L1 SAPCD2
nsv524322 Chr.9:136795692 - 137482216 on Build GRCh38 Loss EXD3 NELFB MIR4479 TUBB4B MIR7114 PRR31 MAN1B1 EDF1 CCDC183 RNF208 DPP7 RNF224 TMEM203 NOXA1 C9orf139 LOC101930307 ENTPD8 ENTPD2 ANAPC2 MAMDC4 LCNL1 TMEM210 C8G NPDC1 MIR3621 MIR4292 LCN12 C9orf173-AS1 TRAF2 PNPLA7 CYSRT1 C9orf142 CCDC183-AS1 FBXW5 SLC34A3 UAP1L1 NSMF RABL6 TPRN FUT7 NDOR1 CLIC3 FAM166A STPG3 SAPCD2 PTGDS C9orf172 LRRC26 ABCA2 PHPT1 GRIN1 NRARP SSNA1 TOR4A MAN1B1-AS1
nsv951206 Chr.9:136944849 - 137114548 on Build GRCh38 Deletion CLIC3 LCN12 PRR31 MAN1B1 LCNL1 C9orf142 C8G NPDC1 DPP7 SAPCD2 PTGDS UAP1L1 C9orf139 ABCA2 LOC101930307 FUT7 MAN1B1-AS1 ENTPD2
nsv469918 Chr.9:136359865 - 137173890 on Build GRCh38 Loss MIR4479 PRR31 MAN1B1 LOC100128593 EDF1 CCDC183 MIR6722 DPP7 LCN15 LCN8 SNAPC4 MIR4673 C9orf139 NALT1 LOC101930307 MIR126 ENTPD2 EGFL7 MAMDC4 LCNL1 TMEM141 TMEM210 C8G NPDC1 SNHG7 MIR3621 MIR4674 MIR4292 LCN12 LCN6 TRAF2 LINC01451 C9orf142 CCDC183-AS1 SDCCAG3 FBXW5 SEC16A UAP1L1 LCN10 SNORA17A NOTCH1 RABL6 INPP5E FUT7 AGPAT2 CLIC3 CARD9 DNLZ SNORA17B C9orf163 SAPCD2 PTGDS FAM69B PMPCA C9orf172 LRRC26 ABCA2 PHPT1 GRIN1 HSPC324 MAN1B1-AS1
esv2761561 Chr.9:137030185 - 137191593 on Build GRCh38 Gain ANAPC2 MAN1B1 TMEM210 NPDC1 DPP7 SAPCD2 UAP1L1 MIR3621 LRRC26 C9orf139 GRIN1 LOC101930307 FUT7 SSNA1 MAN1B1-AS1 ENTPD2
nsv616005 Chr.9:137036493 - 137173890 on Build GRCh38 Loss MAN1B1 TMEM210 NPDC1 DPP7 SAPCD2 UAP1L1 MIR3621 LRRC26 C9orf139 GRIN1 LOC101930307 MAN1B1-AS1 ENTPD2
esv2422220 Chr.9:136584135 - 137350098 on Build GRCh38 Deletion EXD3 NELFB MIR4479 TUBB4B PRR31 MAN1B1 LOC100128593 EDF1 CCDC183 RNF208 MIR6722 DPP7 LCN15 LCN8 RNF224 TMEM203 C9orf139 LOC101930307 MIR126 ENTPD2 ANAPC2 EGFL7 MAMDC4 LCNL1 TMEM141 TMEM210 C8G NPDC1 SNHG7 MIR3621 MIR4292 LCN12 LCN6 C9orf173-AS1 TRAF2 LINC01451 CYSRT1 C9orf142 CCDC183-AS1 FBXW5 SLC34A3 UAP1L1 LCN10 SNORA17A RABL6 TPRN FUT7 AGPAT2 NDOR1 CLIC3 FAM166A STPG3 SNORA17B SAPCD2 PTGDS FAM69B C9orf172 LRRC26 ABCA2 PHPT1 GRIN1 HSPC324 NRARP SSNA1 TOR4A MAN1B1-AS1
nsv982354 Chr.9:137057355 - 137073859 on Build GRCh38 Duplication SAPCD2

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

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