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See other LOC101927069 CNV Assays ›
Gene Symbol
LOC101927069
Assay Reference Genome
Location

Chr.9:68970503 on build GRCh38
Cytoband
9q21.11
Assay ID Hs03717918_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 101927069

Gene Name:

 uncharacterized LOC101927069

Gene Aliases:

 -

Location:

 Chr.9:68953088-68975841 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LOC101927069 NR_110647.1
AK057188.1

Target Gene Details

Entrez Gene ID:

 8395

Gene Name:

 phosphatidylinositol-4-phosphate 5-kinase type 1 beta

Gene Aliases:

 MSS4, STM7

Location:

 Chr.9:68705217-69009176 on Build GRCh38

Assay Gene Location:

 Within Intron 19
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PIP5K1B NM_001278253.1 NP_001265182.1
NM_003558.3 NP_003549.1
XM_005252261.3 XP_005252318.1
XM_005252262.4 XP_005252319.1
XM_006717300.2 XP_006717363.1
XM_006717301.1 XP_006717364.1
XM_011519082.2 XP_011517384.1
XM_011519083.2 XP_011517385.1
XM_011519084.2 XP_011517386.1
XM_017015188.1 XP_016870677.1
XM_017015189.1 XP_016870678.1
XM_017015190.1 XP_016870679.1
XM_017015191.1 XP_016870680.1
AK292734.1
AK295587.1
BC030587.2 AAH30587.1
U78579.1 AAC50914.1
U78580.1 AAC50915.1
U78581.1 AAC50916.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv3891679 Chr.9:68939243 - 69246082 on Build GRCh38 Gain LOC101927069 FXN PIP5K1B TJP2 PRKACG
esv3576657 Chr.9:68955164 - 69227475 on Build GRCh38 Gain LOC101927069 FXN PIP5K1B TJP2 PRKACG
dgv7666n100 Chr.9:68896889 - 69228107 on Build GRCh38 Gain LOC101927069 FXN PIP5K1B TJP2 PRKACG
esv3891678 Chr.9:68918451 - 69144626 on Build GRCh38 Gain LOC101927069 FXN PIP5K1B TJP2 PRKACG
nsv614548 Chr.9:68856996 - 69320661 on Build GRCh38 Gain LOC101927069 FXN PIP5K1B TJP2 BANCR PRKACG
esv2422258 Chr.9:68619929 - 69048424 on Build GRCh38 Duplication FAM122A LOC101927069 LOC105376072 FXN PIP5K1B PRKACG
nsv614547 Chr.9:68838527 - 69089911 on Build GRCh38 Gain LOC101927069 FXN PIP5K1B PRKACG
dgv7665n100 Chr.9:68783797 - 69356369 on Build GRCh38 Gain FAM122A LOC101927069 FXN PIP5K1B TJP2 FAM189A2 BANCR PRKACG
nsv466397 Chr.9:68959841 - 69228107 on Build GRCh38 Gain LOC101927069 FXN PIP5K1B TJP2 PRKACG
nsv614549 Chr.9:68891543 - 69044364 on Build GRCh38 Gain LOC101927069 FXN PIP5K1B PRKACG

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More Information


Additional Information:

For this assay, SNP(s) [rs117542800] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

kinase

Gene Ontology Categories:

Function(s) Process(es)


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