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See other AGPAT2 CNV Assays ›
Gene Symbol
AGPAT2
Assay Reference Genome
Location

Chr.9:136678406 on build GRCh38
Cytoband
9q34.3
Assay ID Hs03720162_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 10555

Gene Name:

 1-acylglycerol-3-phosphate O-acyltransferase 2

Gene Aliases:

 1-AGPAT2, BSCL, BSCL1, LPAAB, LPAAT-beta

Location:

 Chr.9:136673143-136687459 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
AGPAT2 NM_001012727.1 NP_001012745.1
NM_006412.3 NP_006403.2
AF000237.1 AAC51649.1
AF011374.1 AAB64299.1
BC000026.2 AAH00026.1
BC004529.2 AAH04529.1
BC019292.1 AAH19292.1
BF347518.1
CN407343.1
U56418.2 AAB58776.2

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv13005n54 Chr.9:136605258 - 136696482 on Build GRCh38 Loss LINC01451 MIR126 AGPAT2 EGFL7 HSPC324
nsv509334 Chr.9:136514168 - 136724663 on Build GRCh38 Insertion LINC01451 MIR126 MIR4674 AGPAT2 NOTCH1 FAM69B EGFL7 SNHG7 MIR4673 NALT1 HSPC324
nsv951203 Chr.9:136562849 - 136770848 on Build GRCh38 Deletion SNORA17B LOC100128593 LCN8 LCN15 MIR6722 HSPC324 LINC01451 MIR126 SNORA17A AGPAT2 FAM69B EGFL7 SNHG7 LCN10 LCN6
esv2759720 Chr.9:136356377 - 136932033 on Build GRCh38 Loss INPP5E SNAPC4 MIR4674 PHPT1 C9orf172 TMEM141 LCN15 MIR4673 TRAF2 LINC01451 NOTCH1 CCDC183 EDF1 CARD9 LCN10 RABL6 C9orf163 SNORA17B LOC100128593 LCN8 MIR4479 MIR6722 GPSM1 HSPC324 MIR4292 MIR126 CCDC183-AS1 SNORA17A AGPAT2 FAM69B SEC16A SDCCAG3 EGFL7 DNLZ SNHG7 NALT1 PMPCA MAMDC4 LCN6
nsv469918 Chr.9:136359865 - 137173890 on Build GRCh38 Loss INPP5E MIR4674 PHPT1 C9orf172 CLIC3 LCN12 C9orf139 TRAF2 NOTCH1 SAPCD2 C9orf142 LCN10 RABL6 ABCA2 GRIN1 SNORA17B C8G FUT7 MIR6722 MIR4292 ENTPD2 CCDC183-AS1 SNORA17A SEC16A SDCCAG3 PTGDS DNLZ MAN1B1 SNHG7 DPP7 PRR31 PMPCA MAMDC4 FBXW5 UAP1L1 SNAPC4 TMEM141 LCN15 MIR4673 MAN1B1-AS1 LINC01451 CCDC183 MIR3621 EDF1 CARD9 C9orf163 LOC100128593 LCNL1 LCN8 MIR4479 LRRC26 LOC101930307 HSPC324 MIR126 AGPAT2 NPDC1 FAM69B TMEM210 EGFL7 NALT1 LCN6
nsv8579 Chr.9:136505432 - 136760256 on Build GRCh38 Gain SNORA17B MIR4674 LOC100128593 LCN8 LCN15 MIR6722 MIR4673 HSPC324 LINC01451 MIR126 SNORA17A AGPAT2 NOTCH1 FAM69B EGFL7 SNHG7 LCN10 NALT1 LCN6
nsv1053781 Chr.9:136590694 - 136722927 on Build GRCh38 Gain LINC01451 MIR126 AGPAT2 FAM69B EGFL7 HSPC324
dgv13006n54 Chr.9:136619086 - 136725859 on Build GRCh38 Loss MIR126 AGPAT2 FAM69B EGFL7 SNHG7 HSPC324
esv2422220 Chr.9:136584135 - 137350098 on Build GRCh38 Deletion FAM166A PHPT1 C9orf172 SSNA1 CLIC3 LCN12 C9orf139 TRAF2 SAPCD2 C9orf142 LCN10 RABL6 ABCA2 GRIN1 ANAPC2 SNORA17B TMEM203 C8G FUT7 MIR6722 EXD3 MIR4292 ENTPD2 CCDC183-AS1 SNORA17A C9orf173-AS1 PTGDS RNF224 MAN1B1 SNHG7 DPP7 PRR31 MAMDC4 FBXW5 UAP1L1 SLC34A3 TMEM141 LCN15 TUBB4B MAN1B1-AS1 STPG3 LINC01451 CCDC183 MIR3621 EDF1 TOR4A RNF208 NDOR1 LOC100128593 CYSRT1 LCNL1 LCN8 MIR4479 LRRC26 LOC101930307 NELFB HSPC324 MIR126 AGPAT2 NPDC1 FAM69B TMEM210 EGFL7 TPRN LCN6 NRARP

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