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See other SAPCD2 CNV Assays ›
Gene Symbol
SAPCD2
Assay Reference Genome
Location

Chr.9:137066811 on build GRCh38
Cytoband
9q34.3
Assay ID Hs03725707_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 89958

Gene Name:

 suppressor APC domain containing 2

Gene Aliases:

 C9orf140, p42.3

Location:

 Chr.9:137062127-137070576 on Build GRCh38

Assay Gene Location:

 Within Intron 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SAPCD2 NM_178448.3 NP_848543.2
XM_011519180.2 XP_011517482.1
BC048267.1 AAH48267.1
BX332104.2
DQ150361.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv13007n54 Chr.9:136966179 - 137173890 on Build GRCh38 Loss UAP1L1 ENTPD2 C9orf139 NPDC1 CLIC3 PTGDS ABCA2 PRR31 SAPCD2 TMEM210 GRIN1 LCNL1 LRRC26 MAN1B1 C9orf142 MIR3621 LOC101930307 MAN1B1-AS1 DPP7 FUT7
nsv831761 Chr.9:137049674 - 137166473 on Build GRCh38 Loss UAP1L1 ENTPD2 MAN1B1 SAPCD2 LOC101930307 MAN1B1-AS1 DPP7 GRIN1
nsv616006 Chr.9:137057859 - 137083633 on Build GRCh38 Loss UAP1L1 SAPCD2
nsv524322 Chr.9:136795692 - 137482216 on Build GRCh38 Loss C8G UAP1L1 NDOR1 CLIC3 SAPCD2 NSMF TMEM210 CCDC183-AS1 C9orf172 PHPT1 EXD3 LCNL1 RNF224 TPRN TOR4A MIR3621 LOC101930307 MAN1B1-AS1 DPP7 FUT7 STPG3 FBXW5 EDF1 ENTPD2 TRAF2 SLC34A3 CYSRT1 NPDC1 NOXA1 TUBB4B PTGDS RABL6 MAMDC4 ENTPD8 SSNA1 NELFB LCN12 FAM166A ANAPC2 C9orf139 NRARP PNPLA7 MIR4292 MIR4479 LRRC26 MAN1B1 MIR7114 RNF208 TMEM203 ABCA2 PRR31 C9orf173-AS1 CCDC183 GRIN1 C9orf142
nsv951206 Chr.9:136944849 - 137114548 on Build GRCh38 Deletion C8G UAP1L1 ENTPD2 C9orf139 NPDC1 CLIC3 PTGDS ABCA2 PRR31 SAPCD2 LCNL1 MAN1B1 C9orf142 LCN12 LOC101930307 MAN1B1-AS1 DPP7 FUT7
nsv469918 Chr.9:136359865 - 137173890 on Build GRCh38 Loss SNAPC4 C8G UAP1L1 MIR4674 CLIC3 SAPCD2 HSPC324 TMEM141 TMEM210 CCDC183-AS1 C9orf172 LCN15 PHPT1 LCNL1 LCN6 MIR3621 LOC101930307 MAN1B1-AS1 MIR126 DPP7 FUT7 SDCCAG3 FBXW5 EDF1 ENTPD2 TRAF2 LCN8 CARD9 NPDC1 PTGDS RABL6 MAMDC4 DNLZ MIR6722 EGFL7 LOC100128593 LCN12 SEC16A NOTCH1 SNORA17B C9orf139 PMPCA LCN10 MIR4292 MIR4479 LRRC26 MAN1B1 FAM69B SNHG7 SNORA17A ABCA2 PRR31 NALT1 CCDC183 GRIN1 C9orf163 MIR4673 INPP5E C9orf142 AGPAT2 LINC01451
nsv616005 Chr.9:137036493 - 137173890 on Build GRCh38 Loss UAP1L1 ENTPD2 C9orf139 NPDC1 SAPCD2 TMEM210 GRIN1 LRRC26 MAN1B1 MIR3621 LOC101930307 MAN1B1-AS1 DPP7
esv2761561 Chr.9:137030185 - 137191593 on Build GRCh38 Gain UAP1L1 ANAPC2 ENTPD2 C9orf139 NPDC1 SAPCD2 TMEM210 GRIN1 LRRC26 MAN1B1 SSNA1 MIR3621 LOC101930307 MAN1B1-AS1 DPP7 FUT7
esv2422220 Chr.9:136584135 - 137350098 on Build GRCh38 Deletion C8G UAP1L1 NDOR1 CLIC3 SAPCD2 HSPC324 TMEM141 TMEM210 CCDC183-AS1 C9orf172 LCN15 PHPT1 EXD3 LCNL1 RNF224 TPRN TOR4A LCN6 MIR3621 LOC101930307 MAN1B1-AS1 MIR126 DPP7 FUT7 STPG3 FBXW5 EDF1 ENTPD2 TRAF2 LCN8 SLC34A3 CYSRT1 NPDC1 TUBB4B PTGDS RABL6 MAMDC4 MIR6722 EGFL7 SSNA1 NELFB LOC100128593 LCN12 FAM166A ANAPC2 SNORA17B C9orf139 NRARP LCN10 MIR4292 MIR4479 LRRC26 MAN1B1 FAM69B SNHG7 RNF208 TMEM203 SNORA17A ABCA2 PRR31 C9orf173-AS1 CCDC183 GRIN1 C9orf142 AGPAT2 LINC01451
nsv982354 Chr.9:137057355 - 137073859 on Build GRCh38 Duplication SAPCD2

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

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