Hs03765768_cn

• Gene Symbol: LRRC56
• Assay Reference Genome Location: Chr.11:545026 on build GRCh38
• Cytoband: 11p15.5

Target Gene Details

• Entrez Gene ID: 115399
• Gene Name: leucine rich repeat containing 56
• Gene Aliases: -
• Location: Chr.11:518967-554916 on Build GRCh38
• Assay Gene Location: Within Intron 10

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
LRRC56	NM_198075.3			NP_932341.1
	XM_005252775.2			XP_005252832.1
	XM_005252776.2			XP_005252833.1
	XM_006718132.2			XP_006718195.1
	XM_006718133.2			XP_006718196.1
	XM_011519875.2			XP_011518177.1
	XM_011519876.1			XP_011518178.1
	XM_011519877.2			XP_011518179.1
	XM_017017167.1			XP_016872656.1
	XM_017017168.1			XP_016872657.1
	AK024495.1			BAB15785.1
	BC016439.1
	BC035937.1			AAH35937.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv467634	Chr.11:511805 - 619789 on Build GRCh38	Loss	CDHR5 LRRC56 MIR210 LMNTD2 LOC101059906 RASSF7 PHRF1 MIR210HG LOC143666 HRAS IRF7
nsv527327	Chr.11:295343 - 620599 on Build GRCh38	Loss	LRRC56 PGGHG MIR210 LOC101059906 RASSF7 RNH1 IFITM3 IFITM5 SIGIRR PHRF1 MIR210HG LOC143666 PKP3 IFITM2 CDHR5 IFITM1 LMNTD2 ANO9 B4GALNT4 PTDSS2 HRAS IRF7
nsv951270	Chr.11:528401 - 628100 on Build GRCh38	Deletion	CDHR5 LRRC56 MIR210 LMNTD2 LOC101059906 RASSF7 PHRF1 SCT MIR210HG LOC143666 HRAS IRF7
nsv469923	Chr.11:378188 - 1302334 on Build GRCh38	Loss	PIDD1 MIR210 RPLP2 SNORA52 LOC101059906 EPS8L2 PHRF1 POLR2L PDDC1 CEND1 PANO1 DEAF1 LMNTD2 PNPLA2 ANO9 TALDO1 PTDSS2 CRACR2B IRF7 MUC2 MUC6 LRRC56 AP2A2 MIR6744 MUC5B RASSF7 RNH1 LOC101927503 SLC25A22 TOLLIP CD151 SIGIRR TMEM80 SCT MIR210HG LOC143666 PKP3 CDHR5 CHID1 DRD4 MUC5AC LOC171391 B4GALNT4 TSPAN4 HRAS
esv3625069	Chr.11:543810 - 548664 on Build GRCh38	Loss	LRRC56
esv2759794	Chr.11:409846 - 1336162 on Build GRCh38	Loss	PIDD1 TOLLIP-AS1 MIR210 RPLP2 SNORA52 LOC101059906 EPS8L2 PHRF1 POLR2L PDDC1 CEND1 PANO1 DEAF1 LMNTD2 PNPLA2 ANO9 TALDO1 PTDSS2 CRACR2B IRF7 MUC2 MUC6 LRRC56 AP2A2 MIR6744 MUC5B RASSF7 RNH1 LOC101927503 SLC25A22 TOLLIP CD151 SIGIRR TMEM80 SCT MIR210HG LOC143666 CDHR5 CHID1 DRD4 MUC5AC LOC171391 TSPAN4 HRAS
nsv1039558	Chr.11:534242 - 672091 on Build GRCh38	Gain	LRRC56 MIR210 RASSF7 PHRF1 SCT MIR210HG LOC143666 CDHR5 DRD4 DEAF1 LMNTD2 HRAS IRF7
nsv1053964	Chr.11:491334 - 692433 on Build GRCh38	Gain	LRRC56 MIR210 LOC101059906 RASSF7 RNH1 PHRF1 SCT MIR210HG LOC143666 CDHR5 DRD4 DEAF1 LMNTD2 PTDSS2 HRAS IRF7
dgv182e199	Chr.11:349830 - 943372 on Build GRCh38	Deletion	PIDD1 MIR210 RPLP2 SNORA52 LOC101059906 EPS8L2 PHRF1 POLR2L PDDC1 CEND1 PANO1 DEAF1 LMNTD2 PNPLA2 ANO9 TALDO1 PTDSS2 CRACR2B IRF7 LRRC56 AP2A2 RASSF7 RNH1 SLC25A22 CD151 SIGIRR TMEM80 SCT MIR210HG LOC143666 PKP3 CDHR5 CHID1 DRD4 LOC171391 B4GALNT4 TSPAN4 HRAS
nsv1159791	Chr.11:461793 - 909492 on Build GRCh38	Deletion	PIDD1 MIR210 RPLP2 SNORA52 LOC101059906 EPS8L2 PHRF1 POLR2L PDDC1 CEND1 PANO1 DEAF1 LMNTD2 PNPLA2 TALDO1 PTDSS2 CRACR2B IRF7 LRRC56 RASSF7 RNH1 SLC25A22 CD151 TMEM80 SCT MIR210HG LOC143666 CDHR5 CHID1 DRD4 LOC171391 TSPAN4 HRAS
nsv552855	Chr.11:532923 - 545087 on Build GRCh38	Loss	LRRC56 HRAS

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation