Hs03765768_cn

• Gene Symbol: LRRC56
• Assay Reference Genome Location: Chr.11:545026 on build GRCh38
• Cytoband: 11p15.5

Target Gene Details

• Entrez Gene ID: 115399
• Gene Name: leucine rich repeat containing 56
• Gene Aliases: -
• Location: Chr.11:518967-554916 on Build GRCh38
• Assay Gene Location: Within Intron 10

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
LRRC56	NM_198075.3			NP_932341.1
	XM_005252775.2			XP_005252832.1
	XM_005252776.2			XP_005252833.1
	XM_006718132.2			XP_006718195.1
	XM_006718133.2			XP_006718196.1
	XM_011519875.2			XP_011518177.1
	XM_011519876.1			XP_011518178.1
	XM_011519877.2			XP_011518179.1
	XM_017017167.1			XP_016872656.1
	XM_017017168.1			XP_016872657.1
	AK024495.1			BAB15785.1
	BC016439.1
	BC035937.1			AAH35937.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv552854	Chr.11:511805 - 619789 on Build GRCh38	Loss	CDHR5 HRAS MIR210HG LOC143666 IRF7 LMNTD2 MIR210 RASSF7 PHRF1 LRRC56 LOC101059906
nsv527327	Chr.11:295343 - 620599 on Build GRCh38	Loss	IFITM1 MIR210HG PTDSS2 PKP3 RASSF7 RNH1 IFITM2 SIGIRR CDHR5 HRAS B4GALNT4 IFITM3 LOC143666 IRF7 LMNTD2 MIR210 ANO9 IFITM5 PHRF1 PGGHG LRRC56 LOC101059906
nsv951270	Chr.11:528401 - 628100 on Build GRCh38	Deletion	CDHR5 HRAS MIR210HG LOC143666 IRF7 SCT LMNTD2 MIR210 RASSF7 PHRF1 LRRC56 LOC101059906
nsv469923	Chr.11:378188 - 1302334 on Build GRCh38	Loss	CHID1 MIR210HG PKP3 MIR6744 RASSF7 DRD4 TMEM80 MUC2 SIGIRR POLR2L CDHR5 HRAS EPS8L2 RPLP2 SCT MIR210 SNORA52 AP2A2 CEND1 LOC101059906 MUC5AC TSPAN4 PANO1 CRACR2B PTDSS2 TALDO1 PIDD1 DEAF1 LOC171391 MUC6 CD151 RNH1 B4GALNT4 SLC25A22 MUC5B TOLLIP LOC143666 IRF7 LOC101927503 LMNTD2 PDDC1 PNPLA2 ANO9 PHRF1 LRRC56
esv3625069	Chr.11:543810 - 548664 on Build GRCh38	Loss	LRRC56
esv2759794	Chr.11:409846 - 1336162 on Build GRCh38	Loss	CHID1 MIR210HG MIR6744 RASSF7 DRD4 TMEM80 MUC2 SIGIRR POLR2L CDHR5 TOLLIP-AS1 HRAS EPS8L2 RPLP2 SCT MIR210 SNORA52 AP2A2 CEND1 LOC101059906 MUC5AC TSPAN4 PANO1 CRACR2B PTDSS2 TALDO1 PIDD1 DEAF1 LOC171391 MUC6 CD151 RNH1 SLC25A22 MUC5B TOLLIP LOC143666 IRF7 LOC101927503 LMNTD2 PDDC1 PNPLA2 ANO9 PHRF1 LRRC56
nsv1039558	Chr.11:534242 - 672091 on Build GRCh38	Gain	MIR210HG RASSF7 DEAF1 DRD4 CDHR5 HRAS LOC143666 IRF7 SCT LMNTD2 MIR210 PHRF1 LRRC56
dgv182e199	Chr.11:349830 - 943372 on Build GRCh38	Deletion	CHID1 MIR210HG PKP3 RASSF7 DRD4 TMEM80 SIGIRR POLR2L CDHR5 HRAS EPS8L2 RPLP2 SCT MIR210 SNORA52 AP2A2 CEND1 LOC101059906 TSPAN4 PANO1 CRACR2B PTDSS2 TALDO1 PIDD1 DEAF1 LOC171391 CD151 RNH1 B4GALNT4 SLC25A22 LOC143666 IRF7 LMNTD2 PDDC1 PNPLA2 ANO9 PHRF1 LRRC56
nsv1053964	Chr.11:491334 - 692433 on Build GRCh38	Gain	MIR210HG PTDSS2 RASSF7 DEAF1 RNH1 DRD4 CDHR5 HRAS LOC143666 IRF7 SCT LMNTD2 MIR210 PHRF1 LRRC56 LOC101059906
nsv1159791	Chr.11:461793 - 909492 on Build GRCh38	Deletion	CHID1 MIR210HG RASSF7 DRD4 TMEM80 POLR2L CDHR5 HRAS EPS8L2 RPLP2 SCT MIR210 SNORA52 CEND1 LOC101059906 TSPAN4 PANO1 CRACR2B PTDSS2 TALDO1 PIDD1 DEAF1 LOC171391 CD151 RNH1 SLC25A22 LOC143666 IRF7 LMNTD2 PDDC1 PNPLA2 PHRF1 LRRC56
nsv552855	Chr.11:532923 - 545087 on Build GRCh38	Loss	HRAS LRRC56

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation