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See other CHID1 CNV Assays ›
Gene Symbol
CHID1
Assay Reference Genome
Location

Chr.11:879950 on build GRCh38
Cytoband
11p15.5
Assay ID Hs03769776_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 66005

Gene Name:

 chitinase domain containing 1

Gene Aliases:

 GL008, SI-CLP, SICLP

Location:

 Chr.11:867859-915058 on Build GRCh38

Assay Gene Location:

 Within Intron 15
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CHID1 NM_001142674.1 NP_001136146.1
NM_001142675.1 NP_001136147.1
NM_001142676.1 NP_001136148.1
NM_001142677.1 NP_001136149.1
NM_023947.3 NP_076436.3
XM_005253072.2 XP_005253129.1
XM_005253073.4 XP_005253130.1
XM_006718282.2 XP_006718345.1
XM_011520299.1 XP_011518601.1
XM_011520300.1 XP_011518602.1
XM_011520301.2 XP_011518603.1
XM_017018166.1 XP_016873655.1
AF212229.1 AAK14915.1
AK027711.1 BAB55316.1
AK075413.1 BAC11603.1
AK124697.1
AK225025.1
AK225398.1
AK297743.1
AK301245.1
AY037151.1 AAK67632.1
BC000001.2 AAH00001.1
BC013642.1 AAH13642.1
BC095409.1 AAH95409.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv3625086 Chr.11:860117 - 882352 on Build GRCh38 Loss CHID1 TSPAN4
dgv1013n100 Chr.11:772982 - 933569 on Build GRCh38 Gain SNORA52 SLC25A22 CHID1 PIDD1 RPLP2 PNPLA2 AP2A2 PDDC1 CD151 PANO1 CEND1 CRACR2B TSPAN4 POLR2L LOC171391
esv2759794 Chr.11:409846 - 1336162 on Build GRCh38 Loss PHRF1 TMEM80 SNORA52 CHID1 PNPLA2 PDDC1 MUC5AC CD151 LMNTD2 TOLLIP-AS1 CEND1 CRACR2B LOC101927503 SIGIRR RASSF7 POLR2L IRF7 PTDSS2 MUC5B CDHR5 HRAS LOC101059906 MIR210 SLC25A22 MUC6 PIDD1 EPS8L2 RPLP2 AP2A2 TALDO1 ANO9 MIR210HG LOC143666 SCT MUC2 PANO1 LRRC56 TOLLIP TSPAN4 DRD4 LOC171391 DEAF1 RNH1 MIR6744
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion PHRF1 TMEM80 SNORA52 CHID1 PNPLA2 PDDC1 CD151 LMNTD2 CEND1 CRACR2B SIGIRR RASSF7 POLR2L IRF7 PTDSS2 CDHR5 HRAS LOC101059906 MIR210 SLC25A22 PIDD1 EPS8L2 RPLP2 AP2A2 TALDO1 ANO9 MIR210HG LOC143666 SCT B4GALNT4 PANO1 LRRC56 PKP3 TSPAN4 DRD4 LOC171391 DEAF1 RNH1
esv2743878 Chr.11:864732 - 1489652 on Build GRCh38 Deletion MUC6 CHID1 AP2A2 MUC5AC MOB2 TOLLIP-AS1 MUC2 LOC101927503 TOLLIP TSPAN4 MUC5B BRSK2 MIR6744
nsv1159791 Chr.11:461793 - 909492 on Build GRCh38 Deletion PHRF1 TMEM80 SNORA52 CHID1 PNPLA2 PDDC1 CD151 LMNTD2 CEND1 CRACR2B RASSF7 POLR2L IRF7 PTDSS2 CDHR5 HRAS LOC101059906 MIR210 SLC25A22 PIDD1 EPS8L2 RPLP2 TALDO1 MIR210HG LOC143666 SCT PANO1 LRRC56 TSPAN4 DRD4 LOC171391 DEAF1 RNH1
esv3625088 Chr.11:876861 - 979340 on Build GRCh38 Gain CHID1 AP2A2
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss PHRF1 TMEM80 SNORA52 CHID1 PNPLA2 PDDC1 MUC5AC CD151 LMNTD2 CEND1 CRACR2B LOC101927503 SIGIRR RASSF7 POLR2L IRF7 PTDSS2 MUC5B CDHR5 HRAS LOC101059906 MIR210 SLC25A22 MUC6 PIDD1 EPS8L2 RPLP2 AP2A2 TALDO1 ANO9 MIR210HG LOC143666 SCT B4GALNT4 MUC2 PANO1 LRRC56 TOLLIP PKP3 TSPAN4 DRD4 LOC171391 DEAF1 RNH1 MIR6744
dgv175e214 Chr.11:851409 - 1043855 on Build GRCh38 Gain MUC6 CHID1 TSPAN4 AP2A2
esv2669189 Chr.11:864834 - 1489637 on Build GRCh38 Deletion MUC6 CHID1 AP2A2 MUC5AC MOB2 TOLLIP-AS1 MUC2 LOC101927503 TOLLIP TSPAN4 MUC5B BRSK2 MIR6744
nsv832044 Chr.11:809019 - 938308 on Build GRCh38 Loss SNORA52 CRACR2B CHID1 PIDD1 TSPAN4 RPLP2 POLR2L PNPLA2 AP2A2 CD151
nsv1040044 Chr.11:776335 - 900929 on Build GRCh38 Gain+Loss SNORA52 SLC25A22 CHID1 PIDD1 RPLP2 PNPLA2 PDDC1 CD151 PANO1 CEND1 CRACR2B TSPAN4 POLR2L LOC171391
esv32950 Chr.11:877601 - 882764 on Build GRCh38 Gain CHID1
nsv1048774 Chr.11:816471 - 900929 on Build GRCh38 Gain CRACR2B CHID1 TSPAN4 POLR2L PNPLA2 CD151
nsv951272 Chr.11:751201 - 911500 on Build GRCh38 Deletion SNORA52 SLC25A22 CHID1 PIDD1 RPLP2 PNPLA2 PDDC1 TALDO1 CD151 PANO1 CEND1 CRACR2B TSPAN4 POLR2L LOC171391

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