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See other CHID1 CNV Assays ›
Gene Symbol
CHID1
Assay Reference Genome
Location

Chr.11:876304 on build GRCh38
Cytoband
11p15.5
Assay ID Hs03771415_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 66005

Gene Name:

 chitinase domain containing 1

Gene Aliases:

 GL008, SI-CLP, SICLP

Location:

 Chr.11:867859-915058 on Build GRCh38

Assay Gene Location:

 Within Intron 15
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CHID1 NM_001142674.1 NP_001136146.1
NM_001142675.1 NP_001136147.1
NM_001142676.1 NP_001136148.1
NM_001142677.1 NP_001136149.1
NM_023947.3 NP_076436.3
XM_005253072.2 XP_005253129.1
XM_005253073.4 XP_005253130.1
XM_006718282.2 XP_006718345.1
XM_011520299.1 XP_011518601.1
XM_011520300.1 XP_011518602.1
XM_011520301.2 XP_011518603.1
XM_017018166.1 XP_016873655.1
AF212229.1 AAK14915.1
AK027711.1 BAB55316.1
AK075413.1 BAC11603.1
AK124697.1
AK225025.1
AK225398.1
AK297743.1
AK301245.1
AY037151.1 AAK67632.1
BC000001.2 AAH00001.1
BC013642.1 AAH13642.1
BC095409.1 AAH95409.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv3625087 Chr.11:860117 - 882352 on Build GRCh38 Gain CHID1 TSPAN4
dgv1013n100 Chr.11:772982 - 933569 on Build GRCh38 Gain CD151 PDDC1 SLC25A22 POLR2L AP2A2 LOC171391 SNORA52 CRACR2B PNPLA2 RPLP2 PANO1 PIDD1 CHID1 CEND1 TSPAN4
esv2759794 Chr.11:409846 - 1336162 on Build GRCh38 Loss MUC5AC PTDSS2 HRAS TOLLIP-AS1 DRD4 POLR2L SCT MIR6744 AP2A2 PNPLA2 RPLP2 MUC2 ANO9 MIR210 LRRC56 CDHR5 PANO1 PIDD1 TSPAN4 TALDO1 DEAF1 MIR210HG MUC6 CD151 TMEM80 SIGIRR RNH1 PDDC1 MUC5B SLC25A22 LOC101059906 IRF7 LOC171391 SNORA52 LOC143666 CRACR2B EPS8L2 TOLLIP LMNTD2 PHRF1 CHID1 CEND1 RASSF7 LOC101927503
nsv552887 Chr.11:841284 - 876755 on Build GRCh38 Loss CHID1 POLR2L TSPAN4
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion PTDSS2 HRAS DRD4 POLR2L SCT AP2A2 PNPLA2 RPLP2 ANO9 MIR210 LRRC56 CDHR5 PANO1 PKP3 PIDD1 TSPAN4 TALDO1 DEAF1 MIR210HG CD151 TMEM80 SIGIRR RNH1 B4GALNT4 PDDC1 SLC25A22 LOC101059906 IRF7 LOC171391 SNORA52 LOC143666 CRACR2B EPS8L2 LMNTD2 PHRF1 CHID1 CEND1 RASSF7
esv2743878 Chr.11:864732 - 1489652 on Build GRCh38 Deletion MUC6 MUC5AC TOLLIP-AS1 BRSK2 MUC5B MIR6744 AP2A2 TOLLIP MOB2 MUC2 CHID1 TSPAN4 LOC101927503
nsv1159791 Chr.11:461793 - 909492 on Build GRCh38 Deletion PTDSS2 HRAS DRD4 POLR2L SCT PNPLA2 RPLP2 MIR210 LRRC56 CDHR5 PANO1 PIDD1 TSPAN4 TALDO1 DEAF1 MIR210HG CD151 TMEM80 RNH1 PDDC1 SLC25A22 LOC101059906 IRF7 LOC171391 SNORA52 LOC143666 CRACR2B EPS8L2 LMNTD2 PHRF1 CHID1 CEND1 RASSF7
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss MUC5AC PTDSS2 HRAS DRD4 POLR2L SCT MIR6744 AP2A2 PNPLA2 RPLP2 MUC2 ANO9 MIR210 LRRC56 CDHR5 PANO1 PKP3 PIDD1 TSPAN4 TALDO1 DEAF1 MIR210HG MUC6 CD151 TMEM80 SIGIRR RNH1 B4GALNT4 PDDC1 MUC5B SLC25A22 LOC101059906 IRF7 LOC171391 SNORA52 LOC143666 CRACR2B EPS8L2 TOLLIP LMNTD2 PHRF1 CHID1 CEND1 RASSF7 LOC101927503
dgv175e214 Chr.11:851409 - 1043855 on Build GRCh38 Gain MUC6 CHID1 AP2A2 TSPAN4
esv2669189 Chr.11:864834 - 1489637 on Build GRCh38 Deletion MUC6 MUC5AC TOLLIP-AS1 BRSK2 MUC5B MIR6744 AP2A2 TOLLIP MOB2 MUC2 CHID1 TSPAN4 LOC101927503
nsv832044 Chr.11:809019 - 938308 on Build GRCh38 Loss RPLP2 CD151 PIDD1 CHID1 POLR2L AP2A2 TSPAN4 SNORA52 CRACR2B PNPLA2
nsv1040044 Chr.11:776335 - 900929 on Build GRCh38 Gain+Loss CD151 PDDC1 SLC25A22 POLR2L LOC171391 SNORA52 CRACR2B PNPLA2 RPLP2 PANO1 PIDD1 CHID1 CEND1 TSPAN4
nsv1048774 Chr.11:816471 - 900929 on Build GRCh38 Gain CD151 CHID1 POLR2L TSPAN4 CRACR2B PNPLA2
nsv951272 Chr.11:751201 - 911500 on Build GRCh38 Deletion CD151 PDDC1 SLC25A22 POLR2L LOC171391 SNORA52 CRACR2B PNPLA2 RPLP2 PANO1 PIDD1 CHID1 CEND1 TSPAN4 TALDO1

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