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See other LRRC56 CNV Assays ›
Gene Symbol
LRRC56
Assay Reference Genome
Location

Chr.11:538091 on build GRCh38
Cytoband
11p15.5
Assay ID Hs03771540_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 115399

Gene Name:

 leucine rich repeat containing 56

Gene Aliases:

 -

Location:

 Chr.11:518967-554916 on Build GRCh38

Assay Gene Location:

 Within Intron 4
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LRRC56 NM_198075.3 NP_932341.1
XM_005252775.2 XP_005252832.1
XM_005252776.2 XP_005252833.1
XM_006718132.2 XP_006718195.1
XM_011519875.2 XP_011518177.1
XM_011519876.1 XP_011518178.1
XM_011519877.2 XP_011518179.1
XM_017017167.1 XP_016872656.1
XM_017017168.1 XP_016872657.1
AK024495.1 1 1451 BAB15785.1
BC035937.1 AAH35937.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv467634 Chr.11:511805 - 619789 on Build GRCh38 Loss PHRF1 HRAS LOC101059906 LOC143666 CDHR5 LRRC56 RASSF7 MIR210 MIR210HG IRF7 LMNTD2
nsv527327 Chr.11:295343 - 620599 on Build GRCh38 Loss PHRF1 HRAS LOC143666 PGGHG SIGIRR IFITM3 MIR210 PKP3 IFITM2 MIR210HG IFITM5 RNH1 LMNTD2 LOC101059906 CDHR5 IFITM1 LRRC56 B4GALNT4 RASSF7 PTDSS2 ANO9 IRF7
nsv951270 Chr.11:528401 - 628100 on Build GRCh38 Deletion PHRF1 HRAS LOC101059906 LOC143666 CDHR5 LRRC56 SCT RASSF7 MIR210 MIR210HG IRF7 LMNTD2
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss PHRF1 HRAS TALDO1 SLC25A22 LOC171391 DEAF1 MIR6744 TMEM80 MIR210 EPS8L2 DRD4 PNPLA2 CRACR2B PANO1 LMNTD2 LOC101927503 RPLP2 RASSF7 CD151 POLR2L ANO9 TOLLIP MUC6 PIDD1 LOC143666 SIGIRR CEND1 MUC2 PKP3 SNORA52 TSPAN4 MUC5AC AP2A2 MIR210HG RNH1 CHID1 LOC101059906 CDHR5 LRRC56 SCT B4GALNT4 PTDSS2 PDDC1 MUC5B IRF7
esv2759794 Chr.11:409846 - 1336162 on Build GRCh38 Loss PHRF1 HRAS TALDO1 SLC25A22 LOC171391 DEAF1 MIR6744 TMEM80 TOLLIP-AS1 MIR210 EPS8L2 DRD4 PNPLA2 CRACR2B PANO1 LMNTD2 LOC101927503 RPLP2 RASSF7 CD151 POLR2L ANO9 TOLLIP MUC6 PIDD1 LOC143666 SIGIRR CEND1 MUC2 SNORA52 TSPAN4 MUC5AC AP2A2 MIR210HG RNH1 CHID1 LOC101059906 CDHR5 LRRC56 SCT PTDSS2 PDDC1 MUC5B IRF7
nsv1039558 Chr.11:534242 - 672091 on Build GRCh38 Gain PHRF1 HRAS LOC143666 DEAF1 MIR210 DRD4 MIR210HG LMNTD2 CDHR5 LRRC56 SCT RASSF7 IRF7
nsv1053964 Chr.11:491334 - 692433 on Build GRCh38 Gain PHRF1 HRAS LOC143666 DEAF1 MIR210 DRD4 MIR210HG RNH1 LMNTD2 LOC101059906 CDHR5 LRRC56 SCT RASSF7 PTDSS2 IRF7
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion PHRF1 HRAS TALDO1 SLC25A22 LOC171391 DEAF1 TMEM80 MIR210 EPS8L2 DRD4 PNPLA2 CRACR2B PANO1 LMNTD2 RPLP2 RASSF7 CD151 POLR2L ANO9 PIDD1 LOC143666 SIGIRR CEND1 PKP3 SNORA52 TSPAN4 AP2A2 MIR210HG RNH1 CHID1 LOC101059906 CDHR5 LRRC56 SCT B4GALNT4 PTDSS2 PDDC1 IRF7
nsv1159791 Chr.11:461793 - 909492 on Build GRCh38 Deletion PHRF1 HRAS TALDO1 SLC25A22 LOC171391 DEAF1 TMEM80 MIR210 EPS8L2 DRD4 PNPLA2 CRACR2B PANO1 LMNTD2 RPLP2 RASSF7 CD151 POLR2L PIDD1 LOC143666 CEND1 SNORA52 TSPAN4 MIR210HG RNH1 CHID1 LOC101059906 CDHR5 LRRC56 SCT PTDSS2 PDDC1 IRF7
nsv552855 Chr.11:532923 - 545087 on Build GRCh38 Loss HRAS LRRC56

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

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