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See other LRRC56 CNV Assays ›
Gene Symbol
LRRC56
Assay Reference Genome
Location

Chr.11:538091 on build GRCh38
Cytoband
11p15.5
Assay ID Hs03771540_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 115399

Gene Name:

 leucine rich repeat containing 56

Gene Aliases:

 -

Location:

 Chr.11:518967-554916 on Build GRCh38

Assay Gene Location:

 Within Intron 4
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LRRC56 NM_198075.3 NP_932341.1
XM_005252775.2 XP_005252832.1
XM_005252776.2 XP_005252833.1
XM_006718132.2 XP_006718195.1
XM_011519875.2 XP_011518177.1
XM_011519876.1 XP_011518178.1
XM_011519877.2 XP_011518179.1
XM_017017167.1 XP_016872656.1
XM_017017168.1 XP_016872657.1
AK024495.1 1 1451 BAB15785.1
BC035937.1 AAH35937.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv552854 Chr.11:511805 - 619789 on Build GRCh38 Loss LMNTD2 LOC101059906 MIR210 MIR210HG IRF7 CDHR5 PHRF1 RASSF7 HRAS LRRC56 LOC143666
nsv527327 Chr.11:295343 - 620599 on Build GRCh38 Loss PKP3 LOC101059906 MIR210 ANO9 B4GALNT4 IRF7 IFITM3 CDHR5 PHRF1 IFITM2 SIGIRR PTDSS2 LRRC56 LMNTD2 RNH1 MIR210HG IFITM5 IFITM1 PGGHG RASSF7 HRAS LOC143666
nsv951270 Chr.11:528401 - 628100 on Build GRCh38 Deletion LMNTD2 LOC101059906 SCT MIR210 MIR210HG IRF7 CDHR5 PHRF1 RASSF7 HRAS LRRC56 LOC143666
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss PKP3 MUC5B SCT DEAF1 CRACR2B PDDC1 ANO9 IRF7 TOLLIP TMEM80 SIGIRR PTDSS2 MUC6 LOC101927503 AP2A2 LRRC56 DRD4 CD151 MUC5AC TALDO1 PANO1 RASSF7 PNPLA2 CHID1 HRAS MUC2 LOC143666 LOC101059906 CEND1 MIR210 B4GALNT4 SNORA52 CDHR5 PHRF1 LOC171391 EPS8L2 MIR6744 LMNTD2 RNH1 MIR210HG SLC25A22 POLR2L RPLP2 PIDD1 TSPAN4
esv2759794 Chr.11:409846 - 1336162 on Build GRCh38 Loss MUC5B SCT DEAF1 CRACR2B PDDC1 ANO9 IRF7 TOLLIP TMEM80 SIGIRR PTDSS2 MUC6 LOC101927503 AP2A2 LRRC56 DRD4 TOLLIP-AS1 CD151 MUC5AC TALDO1 PANO1 RASSF7 PNPLA2 CHID1 HRAS MUC2 LOC143666 LOC101059906 CEND1 MIR210 SNORA52 CDHR5 PHRF1 LOC171391 EPS8L2 MIR6744 LMNTD2 RNH1 MIR210HG SLC25A22 POLR2L RPLP2 PIDD1 TSPAN4
nsv1039558 Chr.11:534242 - 672091 on Build GRCh38 Gain SCT MIR210 DEAF1 IRF7 CDHR5 PHRF1 LRRC56 DRD4 LMNTD2 MIR210HG RASSF7 HRAS LOC143666
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion PKP3 SCT DEAF1 CRACR2B PDDC1 ANO9 IRF7 TMEM80 SIGIRR PTDSS2 AP2A2 LRRC56 DRD4 CD151 TALDO1 PANO1 RASSF7 PNPLA2 CHID1 HRAS LOC143666 LOC101059906 CEND1 MIR210 B4GALNT4 SNORA52 CDHR5 PHRF1 LOC171391 EPS8L2 LMNTD2 RNH1 MIR210HG SLC25A22 POLR2L RPLP2 PIDD1 TSPAN4
nsv1053964 Chr.11:491334 - 692433 on Build GRCh38 Gain LOC101059906 SCT MIR210 DEAF1 IRF7 CDHR5 PHRF1 PTDSS2 LRRC56 DRD4 LMNTD2 RNH1 MIR210HG RASSF7 HRAS LOC143666
nsv1159791 Chr.11:461793 - 909492 on Build GRCh38 Deletion SCT DEAF1 CRACR2B PDDC1 IRF7 TMEM80 PTDSS2 LRRC56 DRD4 CD151 TALDO1 PANO1 RASSF7 PNPLA2 CHID1 HRAS LOC143666 LOC101059906 CEND1 MIR210 SNORA52 CDHR5 PHRF1 LOC171391 EPS8L2 LMNTD2 RNH1 MIR210HG SLC25A22 POLR2L RPLP2 PIDD1 TSPAN4
nsv552855 Chr.11:532923 - 545087 on Build GRCh38 Loss HRAS LRRC56

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

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