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See other CHID1 CNV Assays ›
Gene Symbol
CHID1
Assay Reference Genome
Location

Chr.11:877581 on build GRCh38
Cytoband
11p15.5
Assay ID Hs03773664_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 66005

Gene Name:

 chitinase domain containing 1

Gene Aliases:

 GL008, SI-CLP, SICLP

Location:

 Chr.11:867859-915058 on Build GRCh38

Assay Gene Location:

 Within Intron 15
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CHID1 NM_001142674.1 NP_001136146.1
NM_001142675.1 NP_001136147.1
NM_001142676.1 NP_001136148.1
NM_001142677.1 NP_001136149.1
NM_023947.3 NP_076436.3
XM_005253072.2 XP_005253129.1
XM_005253073.4 XP_005253130.1
XM_006718282.2 XP_006718345.1
XM_011520299.1 XP_011518601.1
XM_011520300.1 XP_011518602.1
XM_011520301.2 XP_011518603.1
XM_017018166.1 XP_016873655.1
AF212229.1 AAK14915.1
AK027711.1 BAB55316.1
AK075413.1 BAC11603.1
AK124697.1
AK225025.1
AK225398.1
AK297743.1
AK301245.1
AY037151.1 AAK67632.1
BC000001.2 AAH00001.1
BC013642.1 AAH13642.1
BC095409.1 AAH95409.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv3625086 Chr.11:860117 - 882352 on Build GRCh38 Loss TSPAN4 CHID1
dgv1013n100 Chr.11:772982 - 933569 on Build GRCh38 Gain RPLP2 POLR2L LOC171391 PNPLA2 PDDC1 CHID1 PIDD1 SNORA52 CD151 CRACR2B TSPAN4 AP2A2 SLC25A22 CEND1 PANO1
esv2759794 Chr.11:409846 - 1336162 on Build GRCh38 Loss POLR2L LOC143666 PNPLA2 PDDC1 ANO9 LOC101059906 CHID1 CDHR5 LOC101927503 PIDD1 TALDO1 PHRF1 SNORA52 DEAF1 EPS8L2 LMNTD2 TOLLIP-AS1 MIR210HG PTDSS2 AP2A2 MIR6744 SLC25A22 SIGIRR MUC5AC PANO1 RASSF7 RPLP2 RNH1 LOC171391 MUC2 MIR210 TMEM80 IRF7 CD151 CRACR2B TOLLIP SCT MUC6 HRAS DRD4 TSPAN4 CEND1 LRRC56 MUC5B
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion POLR2L LOC143666 PNPLA2 PDDC1 ANO9 LOC101059906 CHID1 CDHR5 PIDD1 TALDO1 PHRF1 SNORA52 DEAF1 EPS8L2 LMNTD2 MIR210HG PTDSS2 AP2A2 SLC25A22 SIGIRR PANO1 RASSF7 RPLP2 RNH1 LOC171391 MIR210 TMEM80 IRF7 CD151 CRACR2B SCT HRAS DRD4 TSPAN4 CEND1 B4GALNT4 LRRC56 PKP3
esv2743878 Chr.11:864732 - 1489652 on Build GRCh38 Deletion CHID1 LOC101927503 MUC2 BRSK2 TOLLIP MOB2 MUC6 TOLLIP-AS1 TSPAN4 AP2A2 MIR6744 MUC5AC MUC5B
nsv1159791 Chr.11:461793 - 909492 on Build GRCh38 Deletion POLR2L LOC143666 PNPLA2 PDDC1 LOC101059906 CHID1 CDHR5 PIDD1 TALDO1 PHRF1 SNORA52 DEAF1 EPS8L2 LMNTD2 MIR210HG PTDSS2 SLC25A22 PANO1 RASSF7 RPLP2 RNH1 LOC171391 MIR210 TMEM80 IRF7 CD151 CRACR2B SCT HRAS DRD4 TSPAN4 CEND1 LRRC56
esv3625088 Chr.11:876861 - 979340 on Build GRCh38 Gain CHID1 AP2A2
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss POLR2L LOC143666 PNPLA2 PDDC1 ANO9 LOC101059906 CHID1 CDHR5 LOC101927503 PIDD1 TALDO1 PHRF1 SNORA52 DEAF1 EPS8L2 LMNTD2 MIR210HG PTDSS2 AP2A2 MIR6744 SLC25A22 SIGIRR MUC5AC PANO1 RASSF7 RPLP2 RNH1 LOC171391 MUC2 MIR210 TMEM80 IRF7 CD151 CRACR2B TOLLIP SCT MUC6 HRAS DRD4 TSPAN4 CEND1 B4GALNT4 LRRC56 MUC5B PKP3
dgv175e214 Chr.11:851409 - 1043855 on Build GRCh38 Gain MUC6 TSPAN4 CHID1 AP2A2
esv2669189 Chr.11:864834 - 1489637 on Build GRCh38 Deletion CHID1 LOC101927503 MUC2 BRSK2 TOLLIP MOB2 MUC6 TOLLIP-AS1 TSPAN4 AP2A2 MIR6744 MUC5AC MUC5B
nsv832044 Chr.11:809019 - 938308 on Build GRCh38 Loss RPLP2 POLR2L PNPLA2 TSPAN4 CHID1 PIDD1 AP2A2 SNORA52 CD151 CRACR2B
nsv1040044 Chr.11:776335 - 900929 on Build GRCh38 Gain+Loss RPLP2 POLR2L LOC171391 PNPLA2 PDDC1 CHID1 PIDD1 SNORA52 CD151 CRACR2B TSPAN4 SLC25A22 CEND1 PANO1
esv32950 Chr.11:877601 - 882764 on Build GRCh38 Gain CHID1
nsv1048774 Chr.11:816471 - 900929 on Build GRCh38 Gain POLR2L PNPLA2 TSPAN4 CHID1 CD151 CRACR2B
nsv951272 Chr.11:751201 - 911500 on Build GRCh38 Deletion RPLP2 POLR2L LOC171391 PNPLA2 PDDC1 CHID1 PIDD1 TALDO1 SNORA52 CD151 CRACR2B TSPAN4 SLC25A22 CEND1 PANO1

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