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See other CHID1 CNV Assays ›
Gene Symbol
CHID1
Assay Reference Genome
Location

Chr.11:870897 on build GRCh38
Cytoband
11p15.5
Assay ID Hs03776647_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 66005

Gene Name:

 chitinase domain containing 1

Gene Aliases:

 GL008, SI-CLP, SICLP

Location:

 Chr.11:867859-915058 on Build GRCh38

Assay Gene Location:

 Within Intron 16
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CHID1 NM_001142674.1 NP_001136146.1
NM_001142675.1 NP_001136147.1
NM_001142676.1 NP_001136148.1
NM_001142677.1 NP_001136149.1
NM_023947.3 NP_076436.3
XM_005253072.2 XP_005253129.1
XM_005253073.4 XP_005253130.1
XM_006718282.2 XP_006718345.1
XM_011520299.1 XP_011518601.1
XM_011520300.1 XP_011518602.1
XM_017018166.1 XP_016873655.1
AF212229.1 AAK14915.1
AK027711.1 BAB55316.1
AK075413.1 BAC11603.1
AK124697.1
AK225025.1
AK225398.1
AK297743.1
AK301245.1
AY037151.1 AAK67632.1
BC000001.2 AAH00001.1
BC013642.1 AAH13642.1
BC095409.1 AAH95409.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv3625086 Chr.11:860117 - 882352 on Build GRCh38 Loss TSPAN4 CHID1
dgv1013n100 Chr.11:772982 - 933569 on Build GRCh38 Gain CRACR2B PNPLA2 TSPAN4 AP2A2 SNORA52 CD151 RPLP2 CEND1 PDDC1 POLR2L PIDD1 SLC25A22 PANO1 LOC171391 CHID1
nsv552887 Chr.11:841284 - 876755 on Build GRCh38 Loss POLR2L TSPAN4 CHID1
esv2759794 Chr.11:409846 - 1336162 on Build GRCh38 Loss LOC143666 LRRC56 CRACR2B PNPLA2 LOC101059906 TMEM80 CDHR5 LMNTD2 AP2A2 TALDO1 ANO9 MUC6 CD151 MIR210 IRF7 RPLP2 PTDSS2 CEND1 PDDC1 SCT HRAS PIDD1 SLC25A22 DRD4 LOC171391 MUC2 CHID1 EPS8L2 RASSF7 PHRF1 MUC5AC DEAF1 SIGIRR TSPAN4 MIR6744 TOLLIP-AS1 SNORA52 RNH1 TOLLIP POLR2L LOC101927503 PANO1 MIR210HG MUC5B
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion LOC143666 LRRC56 CRACR2B PNPLA2 LOC101059906 TMEM80 CDHR5 LMNTD2 AP2A2 TALDO1 ANO9 CD151 MIR210 IRF7 RPLP2 PTDSS2 CEND1 PDDC1 SCT HRAS PIDD1 SLC25A22 DRD4 LOC171391 CHID1 EPS8L2 RASSF7 PHRF1 DEAF1 SIGIRR TSPAN4 PKP3 B4GALNT4 SNORA52 RNH1 POLR2L PANO1 MIR210HG
esv2743878 Chr.11:864732 - 1489652 on Build GRCh38 Deletion TSPAN4 AP2A2 MIR6744 TOLLIP-AS1 BRSK2 MUC6 TOLLIP LOC101927503 MUC2 MOB2 CHID1 MUC5B MUC5AC
nsv1159791 Chr.11:461793 - 909492 on Build GRCh38 Deletion LOC143666 LRRC56 CRACR2B PNPLA2 LOC101059906 TMEM80 CDHR5 LMNTD2 TALDO1 CD151 MIR210 IRF7 RPLP2 PTDSS2 CEND1 PDDC1 SCT HRAS PIDD1 SLC25A22 DRD4 LOC171391 CHID1 EPS8L2 RASSF7 PHRF1 DEAF1 TSPAN4 SNORA52 RNH1 POLR2L PANO1 MIR210HG
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss LOC143666 LRRC56 CRACR2B PNPLA2 LOC101059906 TMEM80 CDHR5 LMNTD2 AP2A2 TALDO1 ANO9 MUC6 CD151 MIR210 IRF7 RPLP2 PTDSS2 CEND1 PDDC1 SCT HRAS PIDD1 SLC25A22 DRD4 LOC171391 MUC2 CHID1 EPS8L2 RASSF7 PHRF1 MUC5AC DEAF1 SIGIRR TSPAN4 PKP3 MIR6744 B4GALNT4 SNORA52 RNH1 TOLLIP POLR2L LOC101927503 PANO1 MIR210HG MUC5B
dgv175e214 Chr.11:851409 - 1043855 on Build GRCh38 Gain TSPAN4 AP2A2 MUC6 CHID1
esv2669189 Chr.11:864834 - 1489637 on Build GRCh38 Deletion TSPAN4 AP2A2 MIR6744 TOLLIP-AS1 BRSK2 MUC6 TOLLIP LOC101927503 MUC2 MOB2 CHID1 MUC5B MUC5AC
nsv832044 Chr.11:809019 - 938308 on Build GRCh38 Loss CRACR2B PNPLA2 POLR2L PIDD1 TSPAN4 AP2A2 SNORA52 CHID1 CD151 RPLP2
nsv1040044 Chr.11:776335 - 900929 on Build GRCh38 Gain+Loss CRACR2B PNPLA2 TSPAN4 SNORA52 CD151 RPLP2 CEND1 PDDC1 POLR2L PIDD1 SLC25A22 PANO1 LOC171391 CHID1
nsv1048774 Chr.11:816471 - 900929 on Build GRCh38 Gain CRACR2B PNPLA2 POLR2L TSPAN4 CHID1 CD151
nsv951272 Chr.11:751201 - 911500 on Build GRCh38 Deletion CRACR2B PNPLA2 TSPAN4 TALDO1 SNORA52 CD151 RPLP2 CEND1 PDDC1 POLR2L PIDD1 SLC25A22 PANO1 LOC171391 CHID1

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