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See other CHID1 CNV Assays ›
Gene Symbol
CHID1
Assay Reference Genome
Location

Chr.11:870897 on build GRCh38
Cytoband
11p15.5
Assay ID Hs03776647_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 66005

Gene Name:

 chitinase domain containing 1

Gene Aliases:

 GL008, SI-CLP, SICLP

Location:

 Chr.11:867859-915058 on Build GRCh38

Assay Gene Location:

 Within Intron 16
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CHID1 NM_001142674.1 NP_001136146.1
NM_001142675.1 NP_001136147.1
NM_001142676.1 NP_001136148.1
NM_001142677.1 NP_001136149.1
NM_023947.3 NP_076436.3
XM_005253072.2 XP_005253129.1
XM_005253073.4 XP_005253130.1
XM_006718282.2 XP_006718345.1
XM_011520299.1 XP_011518601.1
XM_011520300.1 XP_011518602.1
XM_017018166.1 XP_016873655.1
AF212229.1 AAK14915.1
AK027711.1 BAB55316.1
AK075413.1 BAC11603.1
AK124697.1
AK225025.1
AK225398.1
AK297743.1
AK301245.1
AY037151.1 AAK67632.1
BC000001.2 AAH00001.1
BC013642.1 AAH13642.1
BC095409.1 AAH95409.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv3625087 Chr.11:860117 - 882352 on Build GRCh38 Gain TSPAN4 CHID1
dgv1013n100 Chr.11:772982 - 933569 on Build GRCh38 Gain CRACR2B PIDD1 CD151 TSPAN4 PDDC1 PANO1 AP2A2 CHID1 RPLP2 LOC171391 CEND1 POLR2L SLC25A22 SNORA52 PNPLA2
esv2759794 Chr.11:409846 - 1336162 on Build GRCh38 Loss LMNTD2 CD151 DRD4 TSPAN4 RNH1 PANO1 AP2A2 DEAF1 TOLLIP-AS1 CHID1 RASSF7 LRRC56 MIR210 POLR2L CDHR5 SLC25A22 ANO9 SNORA52 PHRF1 PTDSS2 HRAS SCT IRF7 MUC2 CRACR2B PIDD1 PDDC1 EPS8L2 MIR210HG TMEM80 RPLP2 LOC143666 LOC171391 TALDO1 TOLLIP CEND1 MUC5AC LOC101059906 SIGIRR MUC6 LOC101927503 MIR6744 PNPLA2 MUC5B
nsv552887 Chr.11:841284 - 876755 on Build GRCh38 Loss POLR2L TSPAN4 CHID1
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion LMNTD2 CD151 DRD4 TSPAN4 RNH1 PANO1 AP2A2 DEAF1 CHID1 RASSF7 LRRC56 MIR210 POLR2L CDHR5 SLC25A22 ANO9 SNORA52 PHRF1 PTDSS2 HRAS SCT IRF7 CRACR2B PIDD1 PDDC1 EPS8L2 MIR210HG TMEM80 RPLP2 PKP3 LOC143666 LOC171391 TALDO1 CEND1 LOC101059906 SIGIRR PNPLA2 B4GALNT4
esv2743878 Chr.11:864732 - 1489652 on Build GRCh38 Deletion TSPAN4 BRSK2 AP2A2 TOLLIP-AS1 CHID1 TOLLIP MUC5AC MOB2 MUC6 LOC101927503 MIR6744 MUC5B MUC2
nsv1159791 Chr.11:461793 - 909492 on Build GRCh38 Deletion LMNTD2 CD151 DRD4 TSPAN4 RNH1 PANO1 DEAF1 CHID1 RASSF7 LRRC56 MIR210 POLR2L CDHR5 SLC25A22 SNORA52 PHRF1 PTDSS2 HRAS SCT IRF7 CRACR2B PIDD1 PDDC1 EPS8L2 MIR210HG TMEM80 RPLP2 LOC143666 LOC171391 TALDO1 CEND1 LOC101059906 PNPLA2
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss LMNTD2 CD151 DRD4 TSPAN4 RNH1 PANO1 AP2A2 DEAF1 CHID1 RASSF7 LRRC56 MIR210 POLR2L CDHR5 SLC25A22 ANO9 SNORA52 PHRF1 PTDSS2 HRAS SCT IRF7 MUC2 CRACR2B PIDD1 PDDC1 EPS8L2 MIR210HG TMEM80 RPLP2 PKP3 LOC143666 LOC171391 TALDO1 TOLLIP CEND1 MUC5AC LOC101059906 SIGIRR MUC6 LOC101927503 MIR6744 PNPLA2 B4GALNT4 MUC5B
dgv175e214 Chr.11:851409 - 1043855 on Build GRCh38 Gain TSPAN4 MUC6 AP2A2 CHID1
esv2669189 Chr.11:864834 - 1489637 on Build GRCh38 Deletion TSPAN4 BRSK2 AP2A2 TOLLIP-AS1 CHID1 TOLLIP MUC5AC MOB2 MUC6 LOC101927503 MIR6744 MUC5B MUC2
nsv832044 Chr.11:809019 - 938308 on Build GRCh38 Loss POLR2L CRACR2B PIDD1 SNORA52 CD151 TSPAN4 AP2A2 PNPLA2 CHID1 RPLP2
nsv1040044 Chr.11:776335 - 900929 on Build GRCh38 Gain+Loss CRACR2B PIDD1 CD151 TSPAN4 PDDC1 PANO1 CHID1 RPLP2 LOC171391 CEND1 POLR2L SLC25A22 SNORA52 PNPLA2
nsv1048774 Chr.11:816471 - 900929 on Build GRCh38 Gain POLR2L CRACR2B CD151 TSPAN4 PNPLA2 CHID1
nsv951272 Chr.11:751201 - 911500 on Build GRCh38 Deletion CRACR2B PIDD1 CD151 TSPAN4 PDDC1 PANO1 CHID1 RPLP2 LOC171391 TALDO1 CEND1 POLR2L SLC25A22 SNORA52 PNPLA2

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