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See other CHID1 CNV Assays ›
Gene Symbol
CHID1
Assay Reference Genome
Location

Chr.11:888456 on build GRCh38
Cytoband
11p15.5
Assay ID Hs03777381_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 66005

Gene Name:

 chitinase domain containing 1

Gene Aliases:

 GL008, SI-CLP, SICLP

Location:

 Chr.11:867859-915058 on Build GRCh38

Assay Gene Location:

 Within Intron 12
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CHID1 NM_001142674.1 NP_001136146.1
NM_001142675.1 NP_001136147.1
NM_001142676.1 NP_001136148.1
NM_001142677.1 NP_001136149.1
NM_023947.3 NP_076436.3
XM_005253072.2 XP_005253129.1
XM_005253073.4 XP_005253130.1
XM_006718282.2 XP_006718345.1
XM_011520299.1 XP_011518601.1
XM_011520300.1 XP_011518602.1
XM_011520301.2 XP_011518603.1
XM_011520302.2 XP_011518604.1
XM_017018166.1 XP_016873655.1
XM_017018167.1 XP_016873656.1
XM_017018168.1 XP_016873657.1
AF212229.1 AAK14915.1
AK027711.1 BAB55316.1
AK075413.1 BAC11603.1
AK124697.1
AK225025.1
AK225398.1
AK297743.1
AK301245.1
AY037151.1 AAK67632.1
BC000001.2 AAH00001.1
BC013642.1 AAH13642.1
BC095409.1 AAH95409.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv1013n100 Chr.11:772982 - 933569 on Build GRCh38 Gain SNORA52 CEND1 PDDC1 SLC25A22 RPLP2 CRACR2B POLR2L CHID1 LOC171391 AP2A2 CD151 PANO1 TSPAN4 PIDD1 PNPLA2
nsv428244 Chr.11:882364 - 1061595 on Build GRCh38 Loss MUC6 LOC101927503 AP2A2 CHID1
esv2759794 Chr.11:409846 - 1336162 on Build GRCh38 Loss PTDSS2 MUC6 SNORA52 LOC101927503 LOC143666 RASSF7 IRF7 PHRF1 TOLLIP LOC101059906 TMEM80 AP2A2 LRRC56 DEAF1 SIGIRR RNH1 EPS8L2 CDHR5 PIDD1 PNPLA2 MUC5AC TOLLIP-AS1 CEND1 PDDC1 SLC25A22 RPLP2 CRACR2B MIR6744 POLR2L MIR210 CHID1 MUC2 MUC5B LOC171391 MIR210HG LMNTD2 SCT TALDO1 CD151 DRD4 PANO1 ANO9 HRAS TSPAN4
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion PTDSS2 SNORA52 LOC143666 RASSF7 IRF7 PHRF1 LOC101059906 TMEM80 AP2A2 LRRC56 DEAF1 SIGIRR RNH1 EPS8L2 CDHR5 B4GALNT4 PIDD1 PNPLA2 CEND1 PDDC1 SLC25A22 RPLP2 CRACR2B POLR2L MIR210 CHID1 LOC171391 MIR210HG LMNTD2 SCT TALDO1 CD151 DRD4 PANO1 PKP3 ANO9 HRAS TSPAN4
esv2743878 Chr.11:864732 - 1489652 on Build GRCh38 Deletion MUC5AC MUC6 TOLLIP-AS1 LOC101927503 BRSK2 MIR6744 TOLLIP CHID1 MUC2 MUC5B AP2A2 MOB2 TSPAN4
nsv1159791 Chr.11:461793 - 909492 on Build GRCh38 Deletion PTDSS2 SNORA52 LOC143666 RASSF7 IRF7 PHRF1 LOC101059906 TMEM80 LRRC56 DEAF1 RNH1 EPS8L2 CDHR5 PIDD1 PNPLA2 CEND1 PDDC1 SLC25A22 RPLP2 CRACR2B POLR2L MIR210 CHID1 LOC171391 MIR210HG LMNTD2 SCT TALDO1 CD151 DRD4 PANO1 HRAS TSPAN4
esv3625088 Chr.11:876861 - 979340 on Build GRCh38 Gain AP2A2 CHID1
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss PTDSS2 MUC6 SNORA52 LOC101927503 LOC143666 RASSF7 IRF7 PHRF1 TOLLIP LOC101059906 TMEM80 AP2A2 LRRC56 DEAF1 SIGIRR RNH1 EPS8L2 CDHR5 B4GALNT4 PIDD1 PNPLA2 MUC5AC CEND1 PDDC1 SLC25A22 RPLP2 CRACR2B MIR6744 POLR2L MIR210 CHID1 MUC2 MUC5B LOC171391 MIR210HG LMNTD2 SCT TALDO1 CD151 DRD4 PANO1 PKP3 ANO9 HRAS TSPAN4
dgv175e214 Chr.11:851409 - 1043855 on Build GRCh38 Gain MUC6 AP2A2 TSPAN4 CHID1
esv2671662 Chr.11:883886 - 889968 on Build GRCh38 Deletion CHID1
esv3625089 Chr.11:883903 - 889936 on Build GRCh38 Loss CHID1
esv2669189 Chr.11:864834 - 1489637 on Build GRCh38 Deletion MUC5AC MUC6 TOLLIP-AS1 LOC101927503 BRSK2 MIR6744 TOLLIP CHID1 MUC2 MUC5B AP2A2 MOB2 TSPAN4
nsv832044 Chr.11:809019 - 938308 on Build GRCh38 Loss SNORA52 AP2A2 CD151 RPLP2 CRACR2B POLR2L TSPAN4 PIDD1 PNPLA2 CHID1
nsv1040044 Chr.11:776335 - 900929 on Build GRCh38 Gain+Loss SNORA52 CEND1 PDDC1 SLC25A22 RPLP2 CRACR2B POLR2L CHID1 LOC171391 CD151 PANO1 TSPAN4 PIDD1 PNPLA2
nsv1048774 Chr.11:816471 - 900929 on Build GRCh38 Gain CD151 CRACR2B POLR2L TSPAN4 PNPLA2 CHID1
nsv951272 Chr.11:751201 - 911500 on Build GRCh38 Deletion SNORA52 CEND1 PDDC1 SLC25A22 RPLP2 CRACR2B POLR2L CHID1 LOC171391 TALDO1 CD151 PANO1 TSPAN4 PIDD1 PNPLA2

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