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See other CDHR5 CNV Assays ›
Gene Symbol
CDHR5
Assay Reference Genome
Location

Chr.11:618483 on build GRCh38
Cytoband
11p15.5
Assay ID Hs03777867_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 53841

Gene Name:

 cadherin related family member 5

Gene Aliases:

 MLPCDH, MU-PCDH, MUCDHL, MUPCDH

Location:

 Chr.11:616565-625067 on Build GRCh38

Assay Gene Location:

 Within Intron 13
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CDHR5 NM_001171968.1 NP_001165439.1
NM_021924.4 NP_068743.2
NM_031264.3 NP_112554.2
XM_006718253.3 XP_006718316.1
XM_011520188.2 XP_011518490.1
XM_011520189.2 XP_011518491.1
XM_011520190.2 XP_011518492.1
XM_011520191.2 XP_011518493.1
AF258675.1 AAG16732.1
AF258676.1 AAG16733.1
AF276242.1 AAG30821.1
AF301909.1 AAG33495.1
AK000226.1 BAA91021.1
AK000384.1 BAA91130.1
AK025012.1 BAB15052.1
AK300991.1
AK308040.1
AY358368.1 AAQ88734.1
BC038405.1 AAH38405.1
DQ491193.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv951270 Chr.11:528401 - 628100 on Build GRCh38 Deletion SCT MIR210HG LMNTD2 LOC143666 LRRC56 MIR210 CDHR5 PHRF1 LOC101059906 RASSF7 HRAS IRF7
nsv552861 Chr.11:589246 - 662407 on Build GRCh38 Loss SCT CDHR5 PHRF1 DEAF1 DRD4 IRF7
esv2759794 Chr.11:409846 - 1336162 on Build GRCh38 Loss MIR6744 TALDO1 SNORA52 MUC5AC LOC101927503 CEND1 TOLLIP-AS1 DRD4 SCT MIR210HG LMNTD2 RNH1 MUC2 TSPAN4 MIR210 CDHR5 PHRF1 MUC6 CD151 PTDSS2 RASSF7 HRAS IRF7 TOLLIP TMEM80 LOC143666 AP2A2 LOC171391 LRRC56 PNPLA2 CRACR2B EPS8L2 PDDC1 RPLP2 MUC5B PANO1 SLC25A22 CHID1 SIGIRR PIDD1 DEAF1 POLR2L LOC101059906 ANO9
nsv1039558 Chr.11:534242 - 672091 on Build GRCh38 Gain LOC143666 LRRC56 DRD4 SCT MIR210HG LMNTD2 MIR210 CDHR5 PHRF1 DEAF1 RASSF7 HRAS IRF7
nsv1053964 Chr.11:491334 - 692433 on Build GRCh38 Gain LOC143666 LRRC56 DRD4 SCT MIR210HG LMNTD2 RNH1 MIR210 CDHR5 PHRF1 DEAF1 LOC101059906 PTDSS2 RASSF7 HRAS IRF7
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion TALDO1 SNORA52 PKP3 CEND1 DRD4 SCT MIR210HG LMNTD2 RNH1 TSPAN4 MIR210 CDHR5 PHRF1 CD151 PTDSS2 RASSF7 HRAS IRF7 TMEM80 LOC143666 AP2A2 LOC171391 LRRC56 PNPLA2 CRACR2B EPS8L2 PDDC1 RPLP2 PANO1 SLC25A22 B4GALNT4 CHID1 SIGIRR PIDD1 DEAF1 POLR2L LOC101059906 ANO9
dgv1524n54 Chr.11:610277 - 619789 on Build GRCh38 Loss CDHR5 PHRF1 IRF7
nsv1159791 Chr.11:461793 - 909492 on Build GRCh38 Deletion TALDO1 SNORA52 CEND1 DRD4 SCT MIR210HG LMNTD2 RNH1 TSPAN4 MIR210 CDHR5 PHRF1 CD151 PTDSS2 RASSF7 HRAS IRF7 TMEM80 LOC143666 LOC171391 LRRC56 PNPLA2 CRACR2B EPS8L2 PDDC1 RPLP2 PANO1 SLC25A22 CHID1 PIDD1 DEAF1 POLR2L LOC101059906
nsv552856 Chr.11:549119 - 619789 on Build GRCh38 Gain MIR210HG LMNTD2 LOC143666 LRRC56 MIR210 CDHR5 PHRF1 RASSF7 IRF7
nsv552865 Chr.11:612843 - 626730 on Build GRCh38 Loss SCT CDHR5 IRF7
dgv1522n54 Chr.11:557342 - 656845 on Build GRCh38 Loss SCT MIR210HG LMNTD2 LOC143666 MIR210 CDHR5 PHRF1 DEAF1 RASSF7 DRD4 IRF7
nsv467634 Chr.11:511805 - 619789 on Build GRCh38 Loss MIR210HG LMNTD2 LOC143666 LRRC56 MIR210 CDHR5 PHRF1 LOC101059906 RASSF7 HRAS IRF7
nsv527327 Chr.11:295343 - 620599 on Build GRCh38 Loss LOC143666 PGGHG PKP3 LRRC56 IFITM5 IFITM2 IFITM3 IFITM1 MIR210HG LMNTD2 RNH1 B4GALNT4 MIR210 CDHR5 PHRF1 SIGIRR LOC101059906 PTDSS2 ANO9 RASSF7 HRAS IRF7
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss MIR6744 TALDO1 SNORA52 PKP3 MUC5AC LOC101927503 CEND1 DRD4 SCT MIR210HG LMNTD2 RNH1 MUC2 TSPAN4 MIR210 CDHR5 PHRF1 MUC6 CD151 PTDSS2 RASSF7 HRAS IRF7 TOLLIP TMEM80 LOC143666 AP2A2 LOC171391 LRRC56 PNPLA2 CRACR2B EPS8L2 PDDC1 RPLP2 MUC5B PANO1 SLC25A22 B4GALNT4 CHID1 SIGIRR PIDD1 DEAF1 POLR2L LOC101059906 ANO9
nsv552862 Chr.11:605856 - 619789 on Build GRCh38 Loss CDHR5 PHRF1 IRF7
esv2762889 Chr.11:606294 - 653614 on Build GRCh38 Loss SCT CDHR5 PHRF1 DEAF1 DRD4 IRF7
nsv528415 Chr.11:558884 - 620599 on Build GRCh38 Loss MIR210HG LMNTD2 LOC143666 MIR210 CDHR5 PHRF1 RASSF7 IRF7

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