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See other CDHR5 CNV Assays ›
Gene Symbol
CDHR5
Assay Reference Genome
Location

Chr.11:618483 on build GRCh38
Cytoband
11p15.5
Assay ID Hs03777867_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 53841

Gene Name:

 cadherin related family member 5

Gene Aliases:

 MLPCDH, MU-PCDH, MUCDHL, MUPCDH

Location:

 Chr.11:616565-625067 on Build GRCh38

Assay Gene Location:

 Within Intron 13
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CDHR5 NM_001171968.1 NP_001165439.1
NM_021924.4 NP_068743.2
NM_031264.3 NP_112554.2
XM_006718253.3 XP_006718316.1
XM_011520188.2 XP_011518490.1
XM_011520189.2 XP_011518491.1
XM_011520190.2 XP_011518492.1
XM_011520191.2 XP_011518493.1
AF258675.1 AAG16732.1
AF258676.1 AAG16733.1
AF276242.1 AAG30821.1
AF301909.1 AAG33495.1
AK000226.1 BAA91021.1
AK000384.1 BAA91130.1
AK025012.1 BAB15052.1
AK300991.1
AK308040.1
AY358368.1 AAQ88734.1
BC038405.1 AAH38405.1
DQ491193.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv951270 Chr.11:528401 - 628100 on Build GRCh38 Deletion HRAS LRRC56 MIR210HG SCT LOC101059906 IRF7 CDHR5 LMNTD2 RASSF7 MIR210 LOC143666 PHRF1
nsv552861 Chr.11:589246 - 662407 on Build GRCh38 Loss SCT DRD4 IRF7 CDHR5 PHRF1 DEAF1
esv2759794 Chr.11:409846 - 1336162 on Build GRCh38 Loss HRAS TMEM80 MUC6 CDHR5 MUC5B MUC5AC LOC171391 PANO1 PHRF1 SIGIRR POLR2L TOLLIP-AS1 CHID1 CRACR2B SLC25A22 MIR210HG TOLLIP TSPAN4 LOC101059906 PNPLA2 IRF7 RASSF7 DEAF1 EPS8L2 PIDD1 DRD4 RNH1 MIR6744 PDDC1 RPLP2 PTDSS2 ANO9 MIR210 AP2A2 MUC2 LRRC56 SCT SNORA52 LOC101927503 CD151 LMNTD2 CEND1 LOC143666 TALDO1
nsv1039558 Chr.11:534242 - 672091 on Build GRCh38 Gain HRAS DRD4 CDHR5 MIR210 PHRF1 LRRC56 MIR210HG SCT IRF7 LMNTD2 RASSF7 LOC143666 DEAF1
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion HRAS TMEM80 PKP3 CDHR5 B4GALNT4 LOC171391 PANO1 PHRF1 SIGIRR POLR2L CHID1 CRACR2B SLC25A22 MIR210HG TSPAN4 LOC101059906 PNPLA2 IRF7 RASSF7 DEAF1 EPS8L2 PIDD1 DRD4 RNH1 PDDC1 RPLP2 PTDSS2 ANO9 MIR210 AP2A2 LRRC56 SCT SNORA52 CD151 LMNTD2 CEND1 LOC143666 TALDO1
nsv1053964 Chr.11:491334 - 692433 on Build GRCh38 Gain HRAS DRD4 CDHR5 RNH1 PTDSS2 MIR210 PHRF1 LRRC56 MIR210HG SCT LOC101059906 IRF7 LMNTD2 RASSF7 LOC143666 DEAF1
nsv1159791 Chr.11:461793 - 909492 on Build GRCh38 Deletion HRAS TMEM80 CDHR5 LOC171391 PANO1 PHRF1 POLR2L CHID1 CRACR2B SLC25A22 MIR210HG TSPAN4 LOC101059906 PNPLA2 IRF7 RASSF7 DEAF1 EPS8L2 PIDD1 DRD4 RNH1 PDDC1 RPLP2 PTDSS2 MIR210 LRRC56 SCT SNORA52 CD151 LMNTD2 CEND1 LOC143666 TALDO1
dgv1524n54 Chr.11:610277 - 619789 on Build GRCh38 Loss IRF7 CDHR5 PHRF1
nsv552856 Chr.11:549119 - 619789 on Build GRCh38 Gain LRRC56 MIR210HG IRF7 CDHR5 LMNTD2 RASSF7 MIR210 LOC143666 PHRF1
nsv552854 Chr.11:511805 - 619789 on Build GRCh38 Loss HRAS LRRC56 MIR210HG LOC101059906 IRF7 CDHR5 LMNTD2 RASSF7 MIR210 LOC143666 PHRF1
dgv1523n54 Chr.11:557342 - 656940 on Build GRCh38 Gain MIR210HG SCT DRD4 IRF7 CDHR5 LMNTD2 RASSF7 MIR210 LOC143666 PHRF1 DEAF1
nsv552865 Chr.11:612843 - 626730 on Build GRCh38 Loss SCT IRF7 CDHR5
nsv527327 Chr.11:295343 - 620599 on Build GRCh38 Loss HRAS IFITM3 PKP3 CDHR5 RNH1 B4GALNT4 PTDSS2 ANO9 MIR210 PHRF1 SIGIRR IFITM1 IFITM2 LRRC56 MIR210HG LOC101059906 PGGHG IRF7 LMNTD2 RASSF7 IFITM5 LOC143666
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss HRAS TMEM80 MUC6 PKP3 CDHR5 MUC5B B4GALNT4 MUC5AC LOC171391 PANO1 PHRF1 SIGIRR POLR2L CHID1 CRACR2B SLC25A22 MIR210HG TOLLIP TSPAN4 LOC101059906 PNPLA2 IRF7 RASSF7 DEAF1 EPS8L2 PIDD1 DRD4 RNH1 MIR6744 PDDC1 RPLP2 PTDSS2 ANO9 MIR210 AP2A2 MUC2 LRRC56 SCT SNORA52 LOC101927503 CD151 LMNTD2 CEND1 LOC143666 TALDO1
nsv552862 Chr.11:605856 - 619789 on Build GRCh38 Loss IRF7 CDHR5 PHRF1
esv2762889 Chr.11:606294 - 653614 on Build GRCh38 Loss SCT DRD4 IRF7 CDHR5 PHRF1 DEAF1
nsv528415 Chr.11:558884 - 620599 on Build GRCh38 Loss MIR210HG IRF7 CDHR5 LMNTD2 RASSF7 MIR210 LOC143666 PHRF1

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