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See other CHID1 CNV Assays ›
Gene Symbol
CHID1
Assay Reference Genome
Location

Chr.11:874940 on build GRCh38
Cytoband
11p15.5
Assay ID Hs03780372_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 66005

Gene Name:

 chitinase domain containing 1

Gene Aliases:

 GL008, SI-CLP, SICLP

Location:

 Chr.11:867859-915058 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 15 - Exon 16
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CHID1 NM_001142674.1 NP_001136146.1
NM_001142675.1 NP_001136147.1
NM_001142676.1 NP_001136148.1
NM_001142677.1 NP_001136149.1
NM_023947.3 NP_076436.3
XM_005253072.2 XP_005253129.1
XM_005253073.4 XP_005253130.1
XM_006718282.2 XP_006718345.1
XM_011520299.1 XP_011518601.1
XM_011520300.1 XP_011518602.1
XM_011520301.2 XP_011518603.1
XM_017018166.1 XP_016873655.1
AF212229.1 AAK14915.1
AK027711.1 BAB55316.1
AK075413.1 BAC11603.1
AK124697.1
AK225025.1
AK225398.1
AK297743.1
AK301245.1
AY037151.1 AAK67632.1
BC000001.2 AAH00001.1
BC013642.1 AAH13642.1
BC095409.1 AAH95409.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv3625087 Chr.11:860117 - 882352 on Build GRCh38 Gain CHID1 TSPAN4
dgv1013n100 Chr.11:772982 - 933569 on Build GRCh38 Gain POLR2L SNORA52 RPLP2 TSPAN4 PNPLA2 PDDC1 AP2A2 SLC25A22 CD151 CRACR2B LOC171391 CEND1 CHID1 PANO1 PIDD1
nsv552887 Chr.11:841284 - 876755 on Build GRCh38 Loss POLR2L CHID1 TSPAN4
esv2759794 Chr.11:409846 - 1336162 on Build GRCh38 Loss MUC2 SNORA52 CDHR5 LRRC56 MUC5AC TSPAN4 PNPLA2 PDDC1 AP2A2 LOC143666 MIR210HG MIR6744 TMEM80 LOC101927503 PHRF1 CHID1 RASSF7 MIR210 PIDD1 SIGIRR POLR2L RPLP2 LOC101059906 LMNTD2 SLC25A22 TOLLIP-AS1 CD151 IRF7 TOLLIP RNH1 PTDSS2 MUC5B CRACR2B LOC171391 CEND1 SCT ANO9 PANO1 DRD4 DEAF1 TALDO1 HRAS MUC6 EPS8L2
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion SNORA52 CDHR5 LRRC56 TSPAN4 PNPLA2 PDDC1 AP2A2 LOC143666 MIR210HG TMEM80 PHRF1 CHID1 RASSF7 MIR210 PIDD1 SIGIRR POLR2L RPLP2 LOC101059906 LMNTD2 SLC25A22 CD151 IRF7 RNH1 PTDSS2 CRACR2B LOC171391 CEND1 SCT ANO9 PANO1 DRD4 DEAF1 TALDO1 HRAS PKP3 B4GALNT4 EPS8L2
esv2743878 Chr.11:864732 - 1489652 on Build GRCh38 Deletion MUC2 MUC5AC TSPAN4 AP2A2 TOLLIP-AS1 TOLLIP MUC5B MIR6744 BRSK2 LOC101927503 CHID1 MOB2 MUC6
nsv1159791 Chr.11:461793 - 909492 on Build GRCh38 Deletion SNORA52 CDHR5 LRRC56 TSPAN4 PNPLA2 PDDC1 LOC143666 MIR210HG TMEM80 PHRF1 CHID1 RASSF7 MIR210 PIDD1 POLR2L RPLP2 LOC101059906 LMNTD2 SLC25A22 CD151 IRF7 RNH1 PTDSS2 CRACR2B LOC171391 CEND1 SCT PANO1 DRD4 DEAF1 TALDO1 HRAS EPS8L2
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss MUC2 SNORA52 CDHR5 LRRC56 MUC5AC TSPAN4 PNPLA2 PDDC1 AP2A2 LOC143666 MIR210HG MIR6744 TMEM80 LOC101927503 PHRF1 CHID1 RASSF7 MIR210 PIDD1 SIGIRR POLR2L RPLP2 LOC101059906 LMNTD2 SLC25A22 CD151 IRF7 TOLLIP RNH1 PTDSS2 MUC5B CRACR2B LOC171391 CEND1 SCT ANO9 PANO1 DRD4 DEAF1 TALDO1 HRAS PKP3 MUC6 B4GALNT4 EPS8L2
dgv175e214 Chr.11:851409 - 1043855 on Build GRCh38 Gain CHID1 TSPAN4 AP2A2 MUC6
esv2669189 Chr.11:864834 - 1489637 on Build GRCh38 Deletion MUC2 MUC5AC TSPAN4 AP2A2 TOLLIP-AS1 TOLLIP MUC5B MIR6744 BRSK2 LOC101927503 CHID1 MOB2 MUC6
nsv832044 Chr.11:809019 - 938308 on Build GRCh38 Loss POLR2L CRACR2B SNORA52 RPLP2 CHID1 TSPAN4 PNPLA2 AP2A2 PIDD1 CD151
nsv1040044 Chr.11:776335 - 900929 on Build GRCh38 Gain+Loss POLR2L SNORA52 RPLP2 TSPAN4 PNPLA2 PDDC1 SLC25A22 CD151 CRACR2B LOC171391 CEND1 CHID1 PANO1 PIDD1
nsv1048774 Chr.11:816471 - 900929 on Build GRCh38 Gain POLR2L CRACR2B CHID1 TSPAN4 PNPLA2 CD151
nsv951272 Chr.11:751201 - 911500 on Build GRCh38 Deletion POLR2L SNORA52 RPLP2 TSPAN4 PNPLA2 PDDC1 SLC25A22 CD151 CRACR2B LOC171391 CEND1 CHID1 PANO1 PIDD1 TALDO1

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