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See other SIGIRR CNV Assays ›
Gene Symbol
SIGIRR
Assay Reference Genome
Location

Chr.11:406645 on build GRCh38
Cytoband
11p15.5
Assay ID Hs03782672_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 59307

Gene Name:

 single Ig and TIR domain containing

Gene Aliases:

 IL-1R8, TIR8

Location:

 Chr.11:405716-417454 on Build GRCh38

Assay Gene Location:

 Within Intron 9
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SIGIRR NM_001135053.1 NP_001128525.1
NM_001135054.1 NP_001128526.1
NM_021805.2 NP_068577.2
XM_005253044.2 XP_005253101.1
XM_005253045.1 XP_005253102.1
XM_005253046.1 XP_005253103.1
XM_005253048.4 XP_005253105.1
XM_017018099.1 XP_016873588.1
XM_017018100.1 XP_016873589.1
AK025099.1 BAB15066.1
AK093427.1 6 1227
AK172830.1 BAD18795.1
AY358342.1 AAQ88708.1
BC003591.1 AAH03591.1
BC025953.1 AAH25953.1
BC106007.1 AAI06008.1
BX369506.2
CR457338.1 CAG33619.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv527327 Chr.11:295343 - 620599 on Build GRCh38 Loss SIGIRR LOC143666 LRRC56 LMNTD2 CDHR5 MIR210 PKP3 HRAS PTDSS2 IFITM2 IFITM1 B4GALNT4 IRF7 MIR210HG IFITM5 PHRF1 IFITM3 RASSF7 RNH1 PGGHG LOC101059906 ANO9
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss SNORA52 SIGIRR RPLP2 LOC143666 LOC101927503 LMNTD2 CRACR2B HRAS MIR6744 IRF7 AP2A2 PNPLA2 MUC5B CEND1 RNH1 LOC101059906 TOLLIP LRRC56 CDHR5 MUC6 MIR210 EPS8L2 PKP3 POLR2L PTDSS2 TALDO1 LOC171391 TSPAN4 CHID1 B4GALNT4 MUC5AC MIR210HG SCT MUC2 PHRF1 TMEM80 CD151 PANO1 SLC25A22 PIDD1 RASSF7 PDDC1 ANO9 DEAF1 DRD4
nsv552776 Chr.11:366710 - 432436 on Build GRCh38 Loss SIGIRR PKP3 B4GALNT4 ANO9
nsv951268 Chr.11:368601 - 503700 on Build GRCh38 Deletion SIGIRR PKP3 PTDSS2 RNH1 B4GALNT4 ANO9
nsv552770 Chr.11:356090 - 444628 on Build GRCh38 Gain SIGIRR PKP3 B4GALNT4 ANO9
dgv1505n54 Chr.11:198510 - 470331 on Build GRCh38 Gain SIGIRR PSMD13 SIRT3 PKP3 PTDSS2 RIC8A IFITM2 IFITM1 B4GALNT4 NLRP6 BET1L MIR6743 ODF3 IFITM5 IFITM3 PGGHG ANO9
nsv1159790 Chr.11:340219 - 491334 on Build GRCh38 Deletion SIGIRR PKP3 PTDSS2 B4GALNT4 ANO9
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion SNORA52 SIGIRR RPLP2 LOC143666 LMNTD2 CRACR2B HRAS IRF7 AP2A2 PNPLA2 CEND1 RNH1 LOC101059906 LRRC56 CDHR5 MIR210 EPS8L2 PKP3 POLR2L PTDSS2 TALDO1 LOC171391 TSPAN4 CHID1 B4GALNT4 MIR210HG SCT PHRF1 TMEM80 CD151 PANO1 SLC25A22 PIDD1 RASSF7 PDDC1 ANO9 DEAF1 DRD4
nsv552822 Chr.11:403545 - 408352 on Build GRCh38 Loss SIGIRR PKP3

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