Hs03785699_cn

• Gene Symbol: LMNTD2
• Assay Reference Genome Location: Chr.11:560602 on build GRCh38
• Cytoband: 11p15.5

Target Gene Details

• Entrez Gene ID: 256329
• Gene Name: lamin tail domain containing 2
• Gene Aliases: C11orf35
• Location: Chr.11:554850-560780 on Build GRCh38
• Assay Gene Location: Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
LMNTD2	NM_173573.2			NP_775844.2
	XM_017017478.1			XP_016872967.1
	BC039077.1			AAH39077.1
	BX384085.2

Target Gene Details

• Entrez Gene ID: 8045
• Gene Name: Ras association domain family member 7
• Gene Aliases: C11orf13, HRAS1, HRC1
• Location: Chr.11:559776-564025 on Build GRCh38
• Assay Gene Location: Within Intron 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
RASSF7	XM_005253149.3			XP_005253206.2
	XM_011520389.1			XP_011518691.1
	XM_017018360.1			XP_016873849.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv552854	Chr.11:511805 - 619789 on Build GRCh38	Loss	LOC101059906 IRF7 RASSF7 PHRF1 HRAS LRRC56 CDHR5 LOC143666 MIR210HG LMNTD2 MIR210
dgv1523n54	Chr.11:557342 - 656940 on Build GRCh38	Gain	IRF7 DEAF1 RASSF7 DRD4 PHRF1 SCT CDHR5 LOC143666 MIR210HG LMNTD2 MIR210
nsv527327	Chr.11:295343 - 620599 on Build GRCh38	Loss	RNH1 LOC101059906 ANO9 IFITM5 RASSF7 PTDSS2 IFITM2 PHRF1 LRRC56 LMNTD2 SIGIRR IRF7 PKP3 B4GALNT4 PGGHG HRAS CDHR5 LOC143666 MIR210HG IFITM1 IFITM3 MIR210
nsv951270	Chr.11:528401 - 628100 on Build GRCh38	Deletion	LOC101059906 IRF7 RASSF7 PHRF1 HRAS LRRC56 SCT CDHR5 LOC143666 MIR210HG LMNTD2 MIR210
nsv469923	Chr.11:378188 - 1302334 on Build GRCh38	Loss	RNH1 LOC101059906 RASSF7 MUC2 TALDO1 PTDSS2 CRACR2B PHRF1 RPLP2 SCT CHID1 PANO1 TSPAN4 PNPLA2 SIGIRR EPS8L2 CD151 TMEM80 CDHR5 LOC143666 MIR6744 LOC171391 MIR210HG SLC25A22 SNORA52 ANO9 LOC101927503 MUC6 MUC5B LRRC56 CEND1 LMNTD2 PIDD1 IRF7 MUC5AC DEAF1 PDDC1 AP2A2 POLR2L PKP3 B4GALNT4 DRD4 HRAS MIR210 TOLLIP
esv2759794	Chr.11:409846 - 1336162 on Build GRCh38	Loss	RNH1 LOC101059906 RASSF7 MUC2 TALDO1 PTDSS2 CRACR2B PHRF1 RPLP2 SCT CHID1 PANO1 TSPAN4 PNPLA2 SIGIRR EPS8L2 CD151 TMEM80 CDHR5 LOC143666 MIR6744 LOC171391 MIR210HG SLC25A22 SNORA52 ANO9 LOC101927503 MUC6 MUC5B LRRC56 CEND1 LMNTD2 PIDD1 IRF7 MUC5AC DEAF1 PDDC1 AP2A2 POLR2L DRD4 HRAS TOLLIP-AS1 MIR210 TOLLIP
nsv1039558	Chr.11:534242 - 672091 on Build GRCh38	Gain	RASSF7 PHRF1 LRRC56 SCT LMNTD2 IRF7 DEAF1 DRD4 HRAS CDHR5 LOC143666 MIR210HG MIR210
nsv528415	Chr.11:558884 - 620599 on Build GRCh38	Loss	IRF7 RASSF7 PHRF1 CDHR5 LOC143666 MIR210HG LMNTD2 MIR210
dgv182e199	Chr.11:349830 - 943372 on Build GRCh38	Deletion	RNH1 LOC101059906 RASSF7 TALDO1 PTDSS2 CRACR2B PHRF1 RPLP2 SCT CHID1 PANO1 TSPAN4 PNPLA2 SIGIRR EPS8L2 CD151 TMEM80 CDHR5 LOC143666 LOC171391 MIR210HG SLC25A22 SNORA52 ANO9 LRRC56 CEND1 LMNTD2 PIDD1 IRF7 DEAF1 PDDC1 AP2A2 POLR2L PKP3 B4GALNT4 DRD4 HRAS MIR210
nsv1053964	Chr.11:491334 - 692433 on Build GRCh38	Gain	RNH1 LOC101059906 RASSF7 PTDSS2 PHRF1 LRRC56 SCT LMNTD2 IRF7 DEAF1 DRD4 HRAS CDHR5 LOC143666 MIR210HG MIR210
nsv1159791	Chr.11:461793 - 909492 on Build GRCh38	Deletion	RNH1 LOC101059906 RASSF7 TALDO1 PTDSS2 CRACR2B PHRF1 RPLP2 SCT CHID1 PANO1 TSPAN4 PNPLA2 EPS8L2 CD151 TMEM80 CDHR5 LOC143666 LOC171391 MIR210HG SLC25A22 SNORA52 LRRC56 CEND1 LMNTD2 PIDD1 IRF7 DEAF1 PDDC1 POLR2L DRD4 HRAS MIR210
nsv469924	Chr.11:549119 - 609887 on Build GRCh38	Gain	RASSF7 PHRF1 LRRC56 LOC143666 MIR210HG LMNTD2 MIR210

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

scaffold/adaptor protein

Gene Ontology Categories:

Process(es)

positive regulation of mRNA splicing, via spliceosome
apoptotic process
signal transduction
regulation of microtubule cytoskeleton organization

Function(s)

protein binding