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See other CHID1 CNV Assays ›
Gene Symbol
CHID1
Assay Reference Genome
Location

Chr.11:885315 on build GRCh38
Cytoband
11p15.5
Assay ID Hs03790900_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 66005

Gene Name:

 chitinase domain containing 1

Gene Aliases:

 GL008, SI-CLP, SICLP

Location:

 Chr.11:867859-915058 on Build GRCh38

Assay Gene Location:

 Within Intron 12
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CHID1 NM_001142674.1 NP_001136146.1
NM_001142675.1 NP_001136147.1
NM_001142676.1 NP_001136148.1
NM_001142677.1 NP_001136149.1
NM_023947.3 NP_076436.3
XM_005253072.2 XP_005253129.1
XM_005253073.4 XP_005253130.1
XM_006718282.2 XP_006718345.1
XM_011520299.1 XP_011518601.1
XM_011520300.1 XP_011518602.1
XM_011520301.2 XP_011518603.1
XM_011520302.2 XP_011518604.1
XM_017018166.1 XP_016873655.1
XM_017018167.1 XP_016873656.1
XM_017018168.1 XP_016873657.1
AF212229.1 AAK14915.1
AK027711.1 BAB55316.1
AK075413.1 BAC11603.1
AK124697.1
AK225025.1
AK225398.1
AK297743.1
AK301245.1
AY037151.1 AAK67632.1
BC000001.2 AAH00001.1
BC013642.1 AAH13642.1
BC095409.1 AAH95409.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv1013n100 Chr.11:772982 - 933569 on Build GRCh38 Gain CHID1 CEND1 CRACR2B POLR2L PIDD1 PANO1 AP2A2 TSPAN4 LOC171391 SNORA52 RPLP2 PDDC1 PNPLA2 SLC25A22 CD151
nsv428244 Chr.11:882364 - 1061595 on Build GRCh38 Loss CHID1 LOC101927503 AP2A2 MUC6
esv2759794 Chr.11:409846 - 1336162 on Build GRCh38 Loss MIR210HG CDHR5 PHRF1 EPS8L2 CRACR2B POLR2L ANO9 LRRC56 PANO1 TSPAN4 MUC2 DEAF1 LOC143666 PTDSS2 SNORA52 TOLLIP RPLP2 IRF7 PDDC1 SIGIRR RASSF7 SLC25A22 CD151 TOLLIP-AS1 MIR6744 CHID1 TALDO1 CEND1 DRD4 PIDD1 AP2A2 MUC6 RNH1 MUC5B LOC101059906 LOC171391 TMEM80 SCT LMNTD2 MIR210 LOC101927503 HRAS PNPLA2 MUC5AC
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion MIR210HG CDHR5 PHRF1 EPS8L2 CRACR2B POLR2L ANO9 LRRC56 PANO1 TSPAN4 DEAF1 LOC143666 PTDSS2 SNORA52 RPLP2 B4GALNT4 IRF7 PDDC1 SIGIRR RASSF7 SLC25A22 CD151 CHID1 TALDO1 CEND1 DRD4 PIDD1 AP2A2 RNH1 LOC101059906 LOC171391 TMEM80 SCT LMNTD2 MIR210 HRAS PNPLA2 PKP3
esv2743878 Chr.11:864732 - 1489652 on Build GRCh38 Deletion MIR6744 CHID1 BRSK2 MOB2 AP2A2 MUC6 TSPAN4 MUC2 MUC5B TOLLIP LOC101927503 MUC5AC TOLLIP-AS1
nsv1159791 Chr.11:461793 - 909492 on Build GRCh38 Deletion MIR210HG CDHR5 PHRF1 EPS8L2 CRACR2B POLR2L LRRC56 PANO1 TSPAN4 DEAF1 LOC143666 PTDSS2 SNORA52 RPLP2 IRF7 PDDC1 RASSF7 SLC25A22 CD151 CHID1 TALDO1 CEND1 DRD4 PIDD1 RNH1 LOC101059906 LOC171391 TMEM80 SCT LMNTD2 MIR210 HRAS PNPLA2
esv3625088 Chr.11:876861 - 979340 on Build GRCh38 Gain CHID1 AP2A2
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss MIR210HG CDHR5 PHRF1 EPS8L2 CRACR2B POLR2L ANO9 LRRC56 PANO1 TSPAN4 MUC2 DEAF1 LOC143666 PTDSS2 SNORA52 TOLLIP RPLP2 B4GALNT4 IRF7 PDDC1 SIGIRR RASSF7 SLC25A22 CD151 MIR6744 CHID1 TALDO1 CEND1 DRD4 PIDD1 AP2A2 MUC6 RNH1 MUC5B LOC101059906 LOC171391 TMEM80 SCT LMNTD2 MIR210 LOC101927503 HRAS PNPLA2 MUC5AC PKP3
dgv175e214 Chr.11:851409 - 1043855 on Build GRCh38 Gain CHID1 AP2A2 MUC6 TSPAN4
esv2671662 Chr.11:883886 - 889968 on Build GRCh38 Deletion CHID1
esv3625089 Chr.11:883903 - 889936 on Build GRCh38 Loss CHID1
esv2669189 Chr.11:864834 - 1489637 on Build GRCh38 Deletion MIR6744 CHID1 BRSK2 MOB2 AP2A2 MUC6 TSPAN4 MUC2 MUC5B TOLLIP LOC101927503 MUC5AC TOLLIP-AS1
nsv832044 Chr.11:809019 - 938308 on Build GRCh38 Loss SNORA52 CHID1 RPLP2 CRACR2B PNPLA2 POLR2L PIDD1 AP2A2 TSPAN4 CD151
nsv1040044 Chr.11:776335 - 900929 on Build GRCh38 Gain+Loss CHID1 CEND1 CRACR2B POLR2L PIDD1 PANO1 TSPAN4 LOC171391 SNORA52 RPLP2 PDDC1 PNPLA2 SLC25A22 CD151
nsv1048774 Chr.11:816471 - 900929 on Build GRCh38 Gain CHID1 CRACR2B PNPLA2 POLR2L TSPAN4 CD151
nsv951272 Chr.11:751201 - 911500 on Build GRCh38 Deletion CHID1 TALDO1 CEND1 CRACR2B POLR2L PIDD1 PANO1 TSPAN4 LOC171391 SNORA52 RPLP2 PDDC1 PNPLA2 SLC25A22 CD151

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