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See other CHID1 CNV Assays ›
Gene Symbol
CHID1
Assay Reference Genome
Location

Chr.11:885315 on build GRCh38
Cytoband
11p15.5
Assay ID Hs03790900_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 66005

Gene Name:

 chitinase domain containing 1

Gene Aliases:

 GL008, SI-CLP, SICLP

Location:

 Chr.11:867859-915058 on Build GRCh38

Assay Gene Location:

 Within Intron 12
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CHID1 NM_001142674.1 NP_001136146.1
NM_001142675.1 NP_001136147.1
NM_001142676.1 NP_001136148.1
NM_001142677.1 NP_001136149.1
NM_023947.3 NP_076436.3
XM_005253072.2 XP_005253129.1
XM_005253073.4 XP_005253130.1
XM_006718282.2 XP_006718345.1
XM_011520299.1 XP_011518601.1
XM_011520300.1 XP_011518602.1
XM_011520301.2 XP_011518603.1
XM_011520302.2 XP_011518604.1
XM_017018166.1 XP_016873655.1
XM_017018167.1 XP_016873656.1
XM_017018168.1 XP_016873657.1
AF212229.1 AAK14915.1
AK027711.1 BAB55316.1
AK075413.1 BAC11603.1
AK124697.1
AK225025.1
AK225398.1
AK297743.1
AK301245.1
AY037151.1 AAK67632.1
BC000001.2 AAH00001.1
BC013642.1 AAH13642.1
BC095409.1 AAH95409.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv428244 Chr.11:882364 - 1061595 on Build GRCh38 Loss CHID1 MUC6 AP2A2 LOC101927503
dgv1013n100 Chr.11:772982 - 933569 on Build GRCh38 Gain CEND1 CRACR2B CD151 POLR2L LOC171391 AP2A2 SLC25A22 PNPLA2 TSPAN4 SNORA52 PIDD1 PANO1 CHID1 PDDC1 RPLP2
esv2759794 Chr.11:409846 - 1336162 on Build GRCh38 Loss LOC143666 CEND1 SCT MIR6744 PHRF1 DRD4 POLR2L MIR210HG LOC101927503 SLC25A22 MIR210 SNORA52 PANO1 CHID1 SIGIRR TOLLIP-AS1 PDDC1 MUC5AC RASSF7 TOLLIP CDHR5 MUC5B CRACR2B CD151 MUC2 RNH1 LMNTD2 HRAS MUC6 LOC171391 AP2A2 TMEM80 IRF7 DEAF1 PNPLA2 EPS8L2 TSPAN4 PIDD1 PTDSS2 LOC101059906 TALDO1 LRRC56 ANO9 RPLP2
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion LOC143666 CEND1 SCT PHRF1 DRD4 POLR2L MIR210HG B4GALNT4 SLC25A22 MIR210 SNORA52 PANO1 CHID1 SIGIRR PDDC1 RASSF7 CDHR5 CRACR2B CD151 RNH1 LMNTD2 HRAS LOC171391 AP2A2 TMEM80 IRF7 DEAF1 PNPLA2 EPS8L2 TSPAN4 PIDD1 PTDSS2 LOC101059906 PKP3 TALDO1 LRRC56 ANO9 RPLP2
esv2743878 Chr.11:864732 - 1489652 on Build GRCh38 Deletion MOB2 TOLLIP BRSK2 MIR6744 MUC5B MUC2 MUC6 AP2A2 LOC101927503 TSPAN4 CHID1 TOLLIP-AS1 MUC5AC
nsv1159791 Chr.11:461793 - 909492 on Build GRCh38 Deletion LOC143666 CEND1 SCT PHRF1 DRD4 POLR2L MIR210HG SLC25A22 MIR210 SNORA52 PANO1 CHID1 PDDC1 RASSF7 CDHR5 CRACR2B CD151 RNH1 LMNTD2 HRAS LOC171391 TMEM80 IRF7 DEAF1 PNPLA2 EPS8L2 TSPAN4 PIDD1 PTDSS2 LOC101059906 TALDO1 LRRC56 RPLP2
esv3625088 Chr.11:876861 - 979340 on Build GRCh38 Gain CHID1 AP2A2
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss LOC143666 CEND1 SCT MIR6744 PHRF1 DRD4 POLR2L MIR210HG B4GALNT4 LOC101927503 SLC25A22 MIR210 SNORA52 PANO1 CHID1 SIGIRR PDDC1 MUC5AC RASSF7 TOLLIP CDHR5 MUC5B CRACR2B CD151 MUC2 RNH1 LMNTD2 HRAS MUC6 LOC171391 AP2A2 TMEM80 IRF7 DEAF1 PNPLA2 EPS8L2 TSPAN4 PIDD1 PTDSS2 LOC101059906 PKP3 TALDO1 LRRC56 ANO9 RPLP2
dgv175e214 Chr.11:851409 - 1043855 on Build GRCh38 Gain TSPAN4 CHID1 MUC6 AP2A2
esv3625089 Chr.11:883903 - 889936 on Build GRCh38 Loss CHID1
esv2671662 Chr.11:883886 - 889968 on Build GRCh38 Deletion CHID1
esv2669189 Chr.11:864834 - 1489637 on Build GRCh38 Deletion MOB2 TOLLIP BRSK2 MIR6744 MUC5B MUC2 MUC6 AP2A2 LOC101927503 TSPAN4 CHID1 TOLLIP-AS1 MUC5AC
nsv832044 Chr.11:809019 - 938308 on Build GRCh38 Loss PNPLA2 TSPAN4 SNORA52 CRACR2B PIDD1 CD151 POLR2L CHID1 AP2A2 RPLP2
nsv1040044 Chr.11:776335 - 900929 on Build GRCh38 Gain+Loss CEND1 CRACR2B CD151 POLR2L LOC171391 SLC25A22 PNPLA2 TSPAN4 SNORA52 PIDD1 PANO1 CHID1 PDDC1 RPLP2
nsv1048774 Chr.11:816471 - 900929 on Build GRCh38 Gain PNPLA2 TSPAN4 CRACR2B CD151 POLR2L CHID1
nsv951272 Chr.11:751201 - 911500 on Build GRCh38 Deletion CEND1 CRACR2B CD151 POLR2L LOC171391 SLC25A22 PNPLA2 TSPAN4 SNORA52 PIDD1 PANO1 CHID1 TALDO1 PDDC1 RPLP2

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