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See other CHID1 CNV Assays ›
Gene Symbol
CHID1
Assay Reference Genome
Location

Chr.11:884668 on build GRCh38
Cytoband
11p15.5
Assay ID Hs03791434_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 66005

Gene Name:

 chitinase domain containing 1

Gene Aliases:

 GL008, SI-CLP, SICLP

Location:

 Chr.11:867859-915058 on Build GRCh38

Assay Gene Location:

 Within Intron 12
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CHID1 NM_001142674.1 NP_001136146.1
NM_001142675.1 NP_001136147.1
NM_001142676.1 NP_001136148.1
NM_001142677.1 NP_001136149.1
NM_023947.3 NP_076436.3
XM_005253072.2 XP_005253129.1
XM_005253073.4 XP_005253130.1
XM_006718282.2 XP_006718345.1
XM_011520299.1 XP_011518601.1
XM_011520300.1 XP_011518602.1
XM_011520301.2 XP_011518603.1
XM_011520302.2 XP_011518604.1
XM_017018166.1 XP_016873655.1
XM_017018167.1 XP_016873656.1
XM_017018168.1 XP_016873657.1
AF212229.1 AAK14915.1
AK027711.1 BAB55316.1
AK075413.1 BAC11603.1
AK124697.1
AK225025.1
AK225398.1
AK297743.1
AK301245.1
AY037151.1 AAK67632.1
BC000001.2 AAH00001.1
BC013642.1 AAH13642.1
BC095409.1 AAH95409.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv428244 Chr.11:882364 - 1061595 on Build GRCh38 Loss CHID1 AP2A2 LOC101927503 MUC6
dgv1013n100 Chr.11:772982 - 933569 on Build GRCh38 Gain CEND1 SNORA52 PNPLA2 PDDC1 CHID1 LOC171391 PIDD1 PANO1 RPLP2 POLR2L CRACR2B SLC25A22 CD151 AP2A2 TSPAN4
esv2759794 Chr.11:409846 - 1336162 on Build GRCh38 Loss PHRF1 SCT CEND1 SNORA52 TOLLIP PTDSS2 IRF7 LOC101927503 PANO1 LOC101059906 RPLP2 POLR2L MUC5B SLC25A22 ANO9 MUC5AC MIR6744 CD151 AP2A2 EPS8L2 TOLLIP-AS1 TSPAN4 RNH1 DRD4 LOC143666 RASSF7 MIR210HG PNPLA2 PDDC1 LMNTD2 CHID1 TMEM80 CDHR5 LOC171391 PIDD1 MIR210 CRACR2B HRAS TALDO1 LRRC56 SIGIRR MUC6 DEAF1 MUC2
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion PHRF1 SCT B4GALNT4 CEND1 SNORA52 PTDSS2 IRF7 PANO1 LOC101059906 RPLP2 POLR2L SLC25A22 ANO9 CD151 AP2A2 EPS8L2 TSPAN4 RNH1 DRD4 LOC143666 RASSF7 MIR210HG PNPLA2 PDDC1 LMNTD2 CHID1 TMEM80 CDHR5 LOC171391 PKP3 PIDD1 MIR210 CRACR2B HRAS TALDO1 LRRC56 SIGIRR DEAF1
esv2743878 Chr.11:864732 - 1489652 on Build GRCh38 Deletion CHID1 TOLLIP BRSK2 LOC101927503 MUC5B MUC5AC MIR6744 MOB2 AP2A2 TOLLIP-AS1 TSPAN4 MUC6 MUC2
nsv1159791 Chr.11:461793 - 909492 on Build GRCh38 Deletion PHRF1 SCT CEND1 SNORA52 PTDSS2 IRF7 PANO1 LOC101059906 RPLP2 POLR2L SLC25A22 CD151 EPS8L2 TSPAN4 RNH1 DRD4 LOC143666 RASSF7 MIR210HG PNPLA2 PDDC1 LMNTD2 CHID1 TMEM80 CDHR5 LOC171391 PIDD1 MIR210 CRACR2B HRAS TALDO1 LRRC56 DEAF1
esv3625088 Chr.11:876861 - 979340 on Build GRCh38 Gain CHID1 AP2A2
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss PHRF1 SCT B4GALNT4 CEND1 SNORA52 TOLLIP PTDSS2 IRF7 LOC101927503 PANO1 LOC101059906 RPLP2 POLR2L MUC5B SLC25A22 ANO9 MUC5AC MIR6744 CD151 AP2A2 EPS8L2 TSPAN4 RNH1 DRD4 LOC143666 RASSF7 MIR210HG PNPLA2 PDDC1 LMNTD2 CHID1 TMEM80 CDHR5 LOC171391 PKP3 PIDD1 MIR210 CRACR2B HRAS TALDO1 LRRC56 SIGIRR MUC6 DEAF1 MUC2
dgv175e214 Chr.11:851409 - 1043855 on Build GRCh38 Gain CHID1 AP2A2 TSPAN4 MUC6
esv3625089 Chr.11:883903 - 889936 on Build GRCh38 Loss CHID1
esv2671662 Chr.11:883886 - 889968 on Build GRCh38 Deletion CHID1
esv2669189 Chr.11:864834 - 1489637 on Build GRCh38 Deletion CHID1 TOLLIP BRSK2 LOC101927503 MUC5B MUC5AC MIR6744 MOB2 AP2A2 TOLLIP-AS1 TSPAN4 MUC6 MUC2
nsv832044 Chr.11:809019 - 938308 on Build GRCh38 Loss SNORA52 PNPLA2 CHID1 CD151 AP2A2 PIDD1 TSPAN4 RPLP2 POLR2L CRACR2B
nsv1040044 Chr.11:776335 - 900929 on Build GRCh38 Gain+Loss CEND1 SNORA52 PNPLA2 PDDC1 CHID1 LOC171391 PIDD1 PANO1 RPLP2 POLR2L CRACR2B SLC25A22 CD151 TSPAN4
nsv1048774 Chr.11:816471 - 900929 on Build GRCh38 Gain PNPLA2 CHID1 CD151 TSPAN4 POLR2L CRACR2B
nsv951272 Chr.11:751201 - 911500 on Build GRCh38 Deletion CEND1 SNORA52 PNPLA2 PDDC1 CHID1 LOC171391 PIDD1 PANO1 RPLP2 POLR2L CRACR2B SLC25A22 TALDO1 CD151 TSPAN4

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