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See other CHID1 CNV Assays ›
Gene Symbol
CHID1
Assay Reference Genome
Location

Chr.11:884668 on build GRCh38
Cytoband
11p15.5
Assay ID Hs03791434_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 66005

Gene Name:

 chitinase domain containing 1

Gene Aliases:

 GL008, SI-CLP, SICLP

Location:

 Chr.11:867859-915058 on Build GRCh38

Assay Gene Location:

 Within Intron 12
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CHID1 NM_001142674.1 NP_001136146.1
NM_001142675.1 NP_001136147.1
NM_001142676.1 NP_001136148.1
NM_001142677.1 NP_001136149.1
NM_023947.3 NP_076436.3
XM_005253072.2 XP_005253129.1
XM_005253073.4 XP_005253130.1
XM_006718282.2 XP_006718345.1
XM_011520299.1 XP_011518601.1
XM_011520300.1 XP_011518602.1
XM_011520301.2 XP_011518603.1
XM_011520302.2 XP_011518604.1
XM_017018166.1 XP_016873655.1
XM_017018167.1 XP_016873656.1
XM_017018168.1 XP_016873657.1
AF212229.1 AAK14915.1
AK027711.1 BAB55316.1
AK075413.1 BAC11603.1
AK124697.1
AK225025.1
AK225398.1
AK297743.1
AK301245.1
AY037151.1 AAK67632.1
BC000001.2 AAH00001.1
BC013642.1 AAH13642.1
BC095409.1 AAH95409.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv1013n100 Chr.11:772982 - 933569 on Build GRCh38 Gain LOC171391 PIDD1 PDDC1 POLR2L CRACR2B SLC25A22 RPLP2 PANO1 SNORA52 AP2A2 CHID1 PNPLA2 CD151 TSPAN4 CEND1
nsv428244 Chr.11:882364 - 1061595 on Build GRCh38 Loss LOC101927503 MUC6 AP2A2 CHID1
esv2759794 Chr.11:409846 - 1336162 on Build GRCh38 Loss RNH1 PIDD1 TOLLIP TMEM80 TALDO1 SLC25A22 RPLP2 DEAF1 MUC6 IRF7 ANO9 CHID1 MUC2 TSPAN4 TOLLIP-AS1 LOC171391 MIR210HG LOC101927503 PDDC1 POLR2L EPS8L2 MIR210 MUC5B CRACR2B DRD4 PANO1 PHRF1 RASSF7 SNORA52 AP2A2 PTDSS2 MIR6744 MUC5AC LMNTD2 HRAS PNPLA2 SIGIRR LRRC56 CD151 CDHR5 SCT CEND1 LOC101059906 LOC143666
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion RNH1 PKP3 PIDD1 TMEM80 TALDO1 SLC25A22 RPLP2 DEAF1 IRF7 ANO9 CHID1 TSPAN4 LOC171391 MIR210HG PDDC1 POLR2L EPS8L2 MIR210 CRACR2B DRD4 PANO1 PHRF1 RASSF7 SNORA52 AP2A2 PTDSS2 LMNTD2 HRAS PNPLA2 SIGIRR B4GALNT4 LRRC56 CD151 CDHR5 SCT CEND1 LOC101059906 LOC143666
esv2743878 Chr.11:864732 - 1489652 on Build GRCh38 Deletion LOC101927503 TOLLIP MUC5B MUC6 MOB2 AP2A2 CHID1 MIR6744 MUC5AC BRSK2 MUC2 TSPAN4 TOLLIP-AS1
nsv1159791 Chr.11:461793 - 909492 on Build GRCh38 Deletion RNH1 PIDD1 TMEM80 TALDO1 SLC25A22 RPLP2 DEAF1 IRF7 CHID1 TSPAN4 LOC171391 MIR210HG PDDC1 POLR2L EPS8L2 MIR210 CRACR2B DRD4 PANO1 PHRF1 RASSF7 SNORA52 PTDSS2 LMNTD2 HRAS PNPLA2 LRRC56 CD151 CDHR5 SCT CEND1 LOC101059906 LOC143666
esv3625088 Chr.11:876861 - 979340 on Build GRCh38 Gain AP2A2 CHID1
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss RNH1 PKP3 PIDD1 TOLLIP TMEM80 TALDO1 SLC25A22 RPLP2 DEAF1 MUC6 IRF7 ANO9 CHID1 MUC2 TSPAN4 LOC171391 MIR210HG LOC101927503 PDDC1 POLR2L EPS8L2 MIR210 MUC5B CRACR2B DRD4 PANO1 PHRF1 RASSF7 SNORA52 AP2A2 PTDSS2 MIR6744 MUC5AC LMNTD2 HRAS PNPLA2 SIGIRR B4GALNT4 LRRC56 CD151 CDHR5 SCT CEND1 LOC101059906 LOC143666
dgv175e214 Chr.11:851409 - 1043855 on Build GRCh38 Gain MUC6 TSPAN4 AP2A2 CHID1
esv2671662 Chr.11:883886 - 889968 on Build GRCh38 Deletion CHID1
esv3625089 Chr.11:883903 - 889936 on Build GRCh38 Loss CHID1
esv2669189 Chr.11:864834 - 1489637 on Build GRCh38 Deletion LOC101927503 TOLLIP MUC5B MUC6 MOB2 AP2A2 CHID1 MIR6744 MUC5AC BRSK2 MUC2 TSPAN4 TOLLIP-AS1
nsv832044 Chr.11:809019 - 938308 on Build GRCh38 Loss PIDD1 POLR2L PNPLA2 CRACR2B RPLP2 CD151 TSPAN4 SNORA52 AP2A2 CHID1
nsv1040044 Chr.11:776335 - 900929 on Build GRCh38 Gain+Loss LOC171391 PIDD1 PDDC1 POLR2L CRACR2B SLC25A22 RPLP2 PANO1 SNORA52 CHID1 PNPLA2 CD151 TSPAN4 CEND1
nsv1048774 Chr.11:816471 - 900929 on Build GRCh38 Gain POLR2L PNPLA2 CRACR2B CD151 TSPAN4 CHID1
nsv951272 Chr.11:751201 - 911500 on Build GRCh38 Deletion LOC171391 PIDD1 PDDC1 POLR2L TALDO1 CRACR2B SLC25A22 RPLP2 PANO1 SNORA52 CHID1 PNPLA2 CD151 TSPAN4 CEND1

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