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See other LRRC56 CNV Assays ›
Gene Symbol
LRRC56
Assay Reference Genome
Location

Chr.11:545639 on build GRCh38
Cytoband
11p15.5
Assay ID Hs03794390_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 115399

Gene Name:

 leucine rich repeat containing 56

Gene Aliases:

 -

Location:

 Chr.11:518967-554916 on Build GRCh38

Assay Gene Location:

 Within Intron 10
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LRRC56 NM_198075.3 NP_932341.1
XM_005252775.2 XP_005252832.1
XM_005252776.2 XP_005252833.1
XM_006718132.2 XP_006718195.1
XM_006718133.2 XP_006718196.1
XM_011519875.2 XP_011518177.1
XM_011519876.1 XP_011518178.1
XM_011519877.2 XP_011518179.1
XM_017017167.1 XP_016872656.1
XM_017017168.1 XP_016872657.1
AK024495.1 BAB15785.1
BC016439.1
BC035937.1 AAH35937.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv552854 Chr.11:511805 - 619789 on Build GRCh38 Loss LOC143666 RASSF7 LRRC56 LOC101059906 CDHR5 LMNTD2 IRF7 HRAS MIR210 MIR210HG PHRF1
nsv527327 Chr.11:295343 - 620599 on Build GRCh38 Loss RASSF7 LRRC56 LOC101059906 IFITM1 IFITM3 CDHR5 IRF7 SIGIRR HRAS PKP3 MIR210 MIR210HG IFITM2 PHRF1 ANO9 LOC143666 LMNTD2 B4GALNT4 PGGHG PTDSS2 RNH1 IFITM5
nsv951270 Chr.11:528401 - 628100 on Build GRCh38 Deletion LOC143666 RASSF7 LRRC56 LOC101059906 CDHR5 SCT LMNTD2 IRF7 HRAS MIR210 MIR210HG PHRF1
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss LRRC56 LOC101059906 MUC6 LOC101927503 EPS8L2 AP2A2 PIDD1 IRF7 PKP3 MIR6744 CRACR2B PHRF1 TOLLIP ANO9 MUC2 CEND1 LOC143666 MUC5B SNORA52 PDDC1 DRD4 B4GALNT4 TMEM80 RASSF7 TSPAN4 CDHR5 DEAF1 TALDO1 SCT LOC171391 RPLP2 SIGIRR CHID1 HRAS MIR210 MIR210HG MUC5AC CD151 PNPLA2 PANO1 LMNTD2 POLR2L SLC25A22 PTDSS2 RNH1
esv3625069 Chr.11:543810 - 548664 on Build GRCh38 Loss LRRC56
esv2759794 Chr.11:409846 - 1336162 on Build GRCh38 Loss LRRC56 LOC101059906 MUC6 LOC101927503 EPS8L2 AP2A2 PIDD1 IRF7 MIR6744 CRACR2B PHRF1 TOLLIP ANO9 MUC2 CEND1 LOC143666 MUC5B SNORA52 PDDC1 DRD4 TMEM80 RASSF7 TSPAN4 CDHR5 DEAF1 TALDO1 SCT LOC171391 RPLP2 SIGIRR CHID1 HRAS MIR210 MIR210HG MUC5AC CD151 PNPLA2 PANO1 LMNTD2 POLR2L SLC25A22 PTDSS2 TOLLIP-AS1 RNH1
nsv1039558 Chr.11:534242 - 672091 on Build GRCh38 Gain RASSF7 LRRC56 CDHR5 DEAF1 SCT IRF7 HRAS MIR210 MIR210HG PHRF1 LOC143666 LMNTD2 DRD4
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion LRRC56 LOC101059906 EPS8L2 AP2A2 PIDD1 IRF7 PKP3 CRACR2B PHRF1 ANO9 CEND1 LOC143666 SNORA52 PDDC1 DRD4 B4GALNT4 TMEM80 RASSF7 TSPAN4 CDHR5 DEAF1 TALDO1 SCT LOC171391 RPLP2 SIGIRR CHID1 HRAS MIR210 MIR210HG CD151 PNPLA2 PANO1 LMNTD2 POLR2L SLC25A22 PTDSS2 RNH1
nsv1053964 Chr.11:491334 - 692433 on Build GRCh38 Gain RASSF7 LRRC56 LOC101059906 CDHR5 DEAF1 SCT IRF7 HRAS MIR210 MIR210HG PHRF1 LOC143666 LMNTD2 DRD4 PTDSS2 RNH1
nsv1159791 Chr.11:461793 - 909492 on Build GRCh38 Deletion LRRC56 LOC101059906 EPS8L2 PIDD1 IRF7 CRACR2B PHRF1 CEND1 LOC143666 SNORA52 PDDC1 DRD4 TMEM80 RASSF7 TSPAN4 CDHR5 DEAF1 TALDO1 SCT LOC171391 RPLP2 CHID1 HRAS MIR210 MIR210HG CD151 PNPLA2 PANO1 LMNTD2 POLR2L SLC25A22 PTDSS2 RNH1

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

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