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See other LRRC56 CNV Assays ›
Gene Symbol
LRRC56
Assay Reference Genome
Location

Chr.11:545639 on build GRCh38
Cytoband
11p15.5
Assay ID Hs03794390_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 115399

Gene Name:

 leucine rich repeat containing 56

Gene Aliases:

 -

Location:

 Chr.11:518967-554916 on Build GRCh38

Assay Gene Location:

 Within Intron 10
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LRRC56 NM_198075.3 NP_932341.1
XM_005252775.2 XP_005252832.1
XM_005252776.2 XP_005252833.1
XM_006718132.2 XP_006718195.1
XM_006718133.2 XP_006718196.1
XM_011519875.2 XP_011518177.1
XM_011519876.1 XP_011518178.1
XM_011519877.2 XP_011518179.1
XM_017017167.1 XP_016872656.1
XM_017017168.1 XP_016872657.1
AK024495.1 BAB15785.1
BC016439.1
BC035937.1 AAH35937.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv467634 Chr.11:511805 - 619789 on Build GRCh38 Loss MIR210 LMNTD2 MIR210HG CDHR5 LOC101059906 IRF7 LOC143666 RASSF7 LRRC56 PHRF1 HRAS
nsv527327 Chr.11:295343 - 620599 on Build GRCh38 Loss MIR210 CDHR5 LOC101059906 IRF7 ANO9 PTDSS2 PKP3 PGGHG SIGIRR IFITM2 IFITM3 RNH1 LMNTD2 MIR210HG LOC143666 B4GALNT4 RASSF7 IFITM5 LRRC56 PHRF1 IFITM1 HRAS
nsv951270 Chr.11:528401 - 628100 on Build GRCh38 Deletion MIR210 LMNTD2 MIR210HG CDHR5 LOC101059906 IRF7 LOC143666 RASSF7 SCT LRRC56 PHRF1 HRAS
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss MIR210 PNPLA2 MUC6 ANO9 PTDSS2 PKP3 SIGIRR PIDD1 MUC5B RNH1 LOC171391 SLC25A22 TOLLIP MUC2 CHID1 PANO1 RASSF7 DRD4 LRRC56 TALDO1 PHRF1 CDHR5 LOC101059906 IRF7 MIR6744 DEAF1 POLR2L AP2A2 EPS8L2 RPLP2 LMNTD2 MIR210HG CEND1 MUC5AC LOC143666 B4GALNT4 CD151 TSPAN4 SNORA52 SCT LOC101927503 PDDC1 TMEM80 CRACR2B HRAS
esv3625069 Chr.11:543810 - 548664 on Build GRCh38 Loss LRRC56
esv2759794 Chr.11:409846 - 1336162 on Build GRCh38 Loss MIR210 PNPLA2 MUC6 ANO9 PTDSS2 SIGIRR PIDD1 MUC5B RNH1 LOC171391 SLC25A22 TOLLIP MUC2 CHID1 PANO1 RASSF7 DRD4 LRRC56 TALDO1 PHRF1 CDHR5 LOC101059906 IRF7 MIR6744 DEAF1 POLR2L AP2A2 EPS8L2 RPLP2 LMNTD2 MIR210HG CEND1 MUC5AC TOLLIP-AS1 LOC143666 CD151 TSPAN4 SNORA52 SCT LOC101927503 PDDC1 TMEM80 CRACR2B HRAS
nsv1039558 Chr.11:534242 - 672091 on Build GRCh38 Gain MIR210 CDHR5 IRF7 DEAF1 LMNTD2 MIR210HG LOC143666 RASSF7 DRD4 SCT LRRC56 PHRF1 HRAS
nsv1053964 Chr.11:491334 - 692433 on Build GRCh38 Gain MIR210 CDHR5 LOC101059906 IRF7 DEAF1 PTDSS2 RNH1 LMNTD2 MIR210HG LOC143666 RASSF7 DRD4 SCT LRRC56 PHRF1 HRAS
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion MIR210 PNPLA2 ANO9 PTDSS2 PKP3 SIGIRR PIDD1 RNH1 LOC171391 SLC25A22 CHID1 PANO1 RASSF7 DRD4 LRRC56 TALDO1 PHRF1 CDHR5 LOC101059906 IRF7 DEAF1 POLR2L AP2A2 EPS8L2 RPLP2 LMNTD2 MIR210HG CEND1 LOC143666 B4GALNT4 CD151 TSPAN4 SNORA52 SCT PDDC1 TMEM80 CRACR2B HRAS
nsv1159791 Chr.11:461793 - 909492 on Build GRCh38 Deletion MIR210 PNPLA2 PTDSS2 PIDD1 RNH1 LOC171391 SLC25A22 CHID1 PANO1 RASSF7 DRD4 LRRC56 TALDO1 PHRF1 CDHR5 LOC101059906 IRF7 DEAF1 POLR2L EPS8L2 RPLP2 LMNTD2 MIR210HG CEND1 LOC143666 CD151 TSPAN4 SNORA52 SCT PDDC1 TMEM80 CRACR2B HRAS

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

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