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See other LRRC56 CNV Assays ›
Gene Symbol
LRRC56
Assay Reference Genome
Location

Chr.11:528274 on build GRCh38
Cytoband
11p15.5
Assay ID Hs03795144_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 115399

Gene Name:

 leucine rich repeat containing 56

Gene Aliases:

 -

Location:

 Chr.11:518967-554916 on Build GRCh38

Assay Gene Location:

 Overlaps Exon 3 - Intron 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LRRC56 XM_011519875.2 XP_011518177.1
XM_011519877.2 XP_011518179.1
XM_017017167.1 XP_016872656.1
XM_017017168.1 XP_016872657.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv552854 Chr.11:511805 - 619789 on Build GRCh38 Loss MIR210HG LOC101059906 LMNTD2 HRAS PHRF1 RASSF7 CDHR5 LRRC56 IRF7 MIR210 LOC143666
nsv527327 Chr.11:295343 - 620599 on Build GRCh38 Loss IFITM5 PTDSS2 MIR210HG IFITM3 LMNTD2 SIGIRR ANO9 CDHR5 IRF7 LOC143666 IFITM1 RNH1 IFITM2 LOC101059906 HRAS B4GALNT4 PHRF1 PGGHG RASSF7 PKP3 LRRC56 MIR210
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss MUC2 CHID1 MUC5AC PNPLA2 EPS8L2 CRACR2B IRF7 SLC25A22 CEND1 MIR6744 DRD4 DEAF1 LOC101059906 SCT TSPAN4 B4GALNT4 PHRF1 TMEM80 RASSF7 PANO1 PDDC1 PIDD1 PTDSS2 MIR210HG LMNTD2 SIGIRR SNORA52 CD151 ANO9 CDHR5 TALDO1 LOC101927503 RPLP2 MUC6 LOC143666 RNH1 TOLLIP MUC5B HRAS PKP3 LRRC56 POLR2L MIR210 AP2A2 LOC171391
esv2759794 Chr.11:409846 - 1336162 on Build GRCh38 Loss MUC2 CHID1 MUC5AC PNPLA2 EPS8L2 CRACR2B IRF7 SLC25A22 CEND1 MIR6744 DRD4 DEAF1 LOC101059906 SCT TSPAN4 PHRF1 TMEM80 RASSF7 TOLLIP-AS1 PANO1 PDDC1 PIDD1 PTDSS2 MIR210HG LMNTD2 SIGIRR SNORA52 CD151 ANO9 CDHR5 TALDO1 LOC101927503 RPLP2 MUC6 LOC143666 RNH1 TOLLIP MUC5B HRAS LRRC56 POLR2L MIR210 AP2A2 LOC171391
esv3366265 Chr.11:528252 - 531250 on Build GRCh38 Duplication LOC101059906 LRRC56
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion CHID1 PNPLA2 EPS8L2 CRACR2B IRF7 SLC25A22 CEND1 DRD4 DEAF1 LOC101059906 SCT TSPAN4 B4GALNT4 PHRF1 TMEM80 RASSF7 PANO1 PDDC1 PIDD1 PTDSS2 MIR210HG LMNTD2 SIGIRR SNORA52 CD151 ANO9 CDHR5 TALDO1 RPLP2 LOC143666 RNH1 HRAS PKP3 LRRC56 POLR2L MIR210 AP2A2 LOC171391
nsv1053964 Chr.11:491334 - 692433 on Build GRCh38 Gain PTDSS2 MIR210HG LMNTD2 CDHR5 IRF7 LOC143666 RNH1 DRD4 DEAF1 LOC101059906 SCT HRAS PHRF1 RASSF7 LRRC56 MIR210
nsv1159791 Chr.11:461793 - 909492 on Build GRCh38 Deletion CHID1 PNPLA2 EPS8L2 CRACR2B IRF7 SLC25A22 CEND1 DRD4 DEAF1 LOC101059906 SCT TSPAN4 PHRF1 TMEM80 RASSF7 PANO1 PDDC1 PIDD1 PTDSS2 MIR210HG LMNTD2 SNORA52 CD151 CDHR5 TALDO1 RPLP2 LOC143666 RNH1 HRAS LRRC56 POLR2L MIR210 LOC171391

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

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