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See other CHID1 CNV Assays ›
Gene Symbol
CHID1
Assay Reference Genome
Location

Chr.11:886922 on build GRCh38
Cytoband
11p15.5
Assay ID Hs03797948_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 66005

Gene Name:

 chitinase domain containing 1

Gene Aliases:

 GL008, SI-CLP, SICLP

Location:

 Chr.11:867859-915058 on Build GRCh38

Assay Gene Location:

 Within Intron 12
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CHID1 NM_001142674.1 NP_001136146.1
NM_001142675.1 NP_001136147.1
NM_001142676.1 NP_001136148.1
NM_001142677.1 NP_001136149.1
NM_023947.3 NP_076436.3
XM_005253072.2 XP_005253129.1
XM_005253073.4 XP_005253130.1
XM_006718282.2 XP_006718345.1
XM_011520299.1 XP_011518601.1
XM_011520300.1 XP_011518602.1
XM_011520301.2 XP_011518603.1
XM_011520302.2 XP_011518604.1
XM_017018166.1 XP_016873655.1
XM_017018167.1 XP_016873656.1
XM_017018168.1 XP_016873657.1
AF212229.1 AAK14915.1
AK027711.1 BAB55316.1
AK075413.1 BAC11603.1
AK124697.1
AK225025.1
AK225398.1
AK297743.1
AK301245.1
AY037151.1 AAK67632.1
BC000001.2 AAH00001.1
BC013642.1 AAH13642.1
BC095409.1 AAH95409.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv1013n100 Chr.11:772982 - 933569 on Build GRCh38 Gain PIDD1 PNPLA2 CEND1 CRACR2B POLR2L TSPAN4 CHID1 PDDC1 RPLP2 LOC171391 CD151 PANO1 AP2A2 SLC25A22 SNORA52
nsv428244 Chr.11:882364 - 1061595 on Build GRCh38 Loss LOC101927503 AP2A2 MUC6 CHID1
esv2759794 Chr.11:409846 - 1336162 on Build GRCh38 Loss TALDO1 PIDD1 LMNTD2 TOLLIP MUC2 MIR6744 SIGIRR CRACR2B IRF7 POLR2L TOLLIP-AS1 SCT MUC5AC RPLP2 EPS8L2 CD151 MIR210HG LOC101927503 MUC6 LOC143666 MUC5B SLC25A22 PTDSS2 HRAS PNPLA2 LRRC56 CEND1 CDHR5 TMEM80 MIR210 TSPAN4 RASSF7 CHID1 PDDC1 DEAF1 LOC101059906 RNH1 ANO9 LOC171391 PANO1 AP2A2 SNORA52 DRD4 PHRF1
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion TALDO1 PIDD1 LMNTD2 SIGIRR CRACR2B IRF7 POLR2L SCT RPLP2 EPS8L2 CD151 MIR210HG LOC143666 SLC25A22 PTDSS2 HRAS PNPLA2 LRRC56 CEND1 CDHR5 TMEM80 MIR210 TSPAN4 RASSF7 CHID1 PKP3 PDDC1 DEAF1 LOC101059906 RNH1 B4GALNT4 ANO9 LOC171391 PANO1 AP2A2 SNORA52 DRD4 PHRF1
esv2743878 Chr.11:864732 - 1489652 on Build GRCh38 Deletion TOLLIP MUC2 MIR6744 TOLLIP-AS1 TSPAN4 CHID1 MUC5AC BRSK2 MOB2 LOC101927503 AP2A2 MUC6 MUC5B
nsv1159791 Chr.11:461793 - 909492 on Build GRCh38 Deletion TALDO1 PIDD1 LMNTD2 CRACR2B IRF7 POLR2L SCT RPLP2 EPS8L2 CD151 MIR210HG LOC143666 SLC25A22 PTDSS2 HRAS PNPLA2 LRRC56 CEND1 CDHR5 TMEM80 MIR210 TSPAN4 RASSF7 CHID1 PDDC1 DEAF1 LOC101059906 RNH1 LOC171391 PANO1 SNORA52 DRD4 PHRF1
esv3625088 Chr.11:876861 - 979340 on Build GRCh38 Gain AP2A2 CHID1
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss TALDO1 PIDD1 LMNTD2 TOLLIP MUC2 MIR6744 SIGIRR CRACR2B IRF7 POLR2L SCT MUC5AC RPLP2 EPS8L2 CD151 MIR210HG LOC101927503 MUC6 LOC143666 MUC5B SLC25A22 PTDSS2 HRAS PNPLA2 LRRC56 CEND1 CDHR5 TMEM80 MIR210 TSPAN4 RASSF7 CHID1 PKP3 PDDC1 DEAF1 LOC101059906 RNH1 B4GALNT4 ANO9 LOC171391 PANO1 AP2A2 SNORA52 DRD4 PHRF1
dgv175e214 Chr.11:851409 - 1043855 on Build GRCh38 Gain TSPAN4 AP2A2 MUC6 CHID1
esv2671662 Chr.11:883886 - 889968 on Build GRCh38 Deletion CHID1
esv3625089 Chr.11:883903 - 889936 on Build GRCh38 Loss CHID1
esv2669189 Chr.11:864834 - 1489637 on Build GRCh38 Deletion TOLLIP MUC2 MIR6744 TOLLIP-AS1 TSPAN4 CHID1 MUC5AC BRSK2 MOB2 LOC101927503 AP2A2 MUC6 MUC5B
nsv832044 Chr.11:809019 - 938308 on Build GRCh38 Loss PIDD1 PNPLA2 CD151 CRACR2B POLR2L TSPAN4 AP2A2 CHID1 SNORA52 RPLP2
nsv1040044 Chr.11:776335 - 900929 on Build GRCh38 Gain+Loss PIDD1 PNPLA2 CEND1 CRACR2B POLR2L TSPAN4 CHID1 PDDC1 RPLP2 LOC171391 CD151 PANO1 SLC25A22 SNORA52
nsv1048774 Chr.11:816471 - 900929 on Build GRCh38 Gain PNPLA2 CD151 CRACR2B POLR2L TSPAN4 CHID1
nsv951272 Chr.11:751201 - 911500 on Build GRCh38 Deletion TALDO1 PIDD1 PNPLA2 CEND1 CRACR2B POLR2L TSPAN4 CHID1 PDDC1 RPLP2 LOC171391 CD151 PANO1 SLC25A22 SNORA52

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