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See other CHID1 CNV Assays ›
Gene Symbol
CHID1
Assay Reference Genome
Location

Chr.11:882703 on build GRCh38
Cytoband
11p15.5
Assay ID Hs03799065_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 66005

Gene Name:

 chitinase domain containing 1

Gene Aliases:

 GL008, SI-CLP, SICLP

Location:

 Chr.11:867859-915058 on Build GRCh38

Assay Gene Location:

 Within Intron 14
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CHID1 NM_001142674.1 NP_001136146.1
NM_001142675.1 NP_001136147.1
NM_001142676.1 NP_001136148.1
NM_001142677.1 NP_001136149.1
NM_023947.3 NP_076436.3
XM_005253072.2 XP_005253129.1
XM_005253073.4 XP_005253130.1
XM_006718282.2 XP_006718345.1
XM_011520299.1 XP_011518601.1
XM_011520300.1 XP_011518602.1
XM_011520301.2 XP_011518603.1
XM_011520302.2 XP_011518604.1
XM_017018166.1 XP_016873655.1
XM_017018167.1 XP_016873656.1
XM_017018168.1 XP_016873657.1
AF212229.1 AAK14915.1
AK027711.1 BAB55316.1
AK075413.1 BAC11603.1
AK124697.1
AK225025.1
AK225398.1
AK297743.1
AK301245.1
AY037151.1 AAK67632.1
BC000001.2 AAH00001.1
BC013642.1 AAH13642.1
BC095409.1 AAH95409.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv1013n100 Chr.11:772982 - 933569 on Build GRCh38 Gain TSPAN4 CRACR2B RPLP2 PANO1 POLR2L PNPLA2 SNORA52 PDDC1 LOC171391 CEND1 SLC25A22 CD151 AP2A2 PIDD1 CHID1
nsv428244 Chr.11:882364 - 1061595 on Build GRCh38 Loss LOC101927503 MUC6 AP2A2 CHID1
esv2759794 Chr.11:409846 - 1336162 on Build GRCh38 Loss IRF7 TSPAN4 ANO9 POLR2L PNPLA2 PTDSS2 LRRC56 MIR210HG SIGIRR CDHR5 LOC171391 MIR6744 LOC143666 MUC6 DRD4 PHRF1 AP2A2 MUC2 LMNTD2 RNH1 CRACR2B MIR210 RPLP2 EPS8L2 PANO1 TALDO1 DEAF1 SCT LOC101927503 TMEM80 SNORA52 TOLLIP HRAS PDDC1 MUC5AC TOLLIP-AS1 LOC101059906 CEND1 SLC25A22 CD151 PIDD1 MUC5B CHID1 RASSF7
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion IRF7 TSPAN4 ANO9 POLR2L B4GALNT4 PNPLA2 PTDSS2 LRRC56 MIR210HG SIGIRR CDHR5 LOC171391 LOC143666 DRD4 PHRF1 AP2A2 LMNTD2 RNH1 CRACR2B PKP3 MIR210 RPLP2 EPS8L2 PANO1 TALDO1 DEAF1 SCT TMEM80 SNORA52 HRAS PDDC1 LOC101059906 CEND1 SLC25A22 CD151 PIDD1 CHID1 RASSF7
esv2743878 Chr.11:864732 - 1489652 on Build GRCh38 Deletion TSPAN4 BRSK2 LOC101927503 TOLLIP MOB2 MUC5AC TOLLIP-AS1 MIR6744 MUC6 AP2A2 MUC2 MUC5B CHID1
nsv1159791 Chr.11:461793 - 909492 on Build GRCh38 Deletion IRF7 TSPAN4 POLR2L PNPLA2 PTDSS2 LRRC56 MIR210HG CDHR5 LOC171391 LOC143666 DRD4 PHRF1 LMNTD2 RNH1 CRACR2B MIR210 RPLP2 EPS8L2 PANO1 TALDO1 DEAF1 SCT TMEM80 SNORA52 HRAS PDDC1 LOC101059906 CEND1 SLC25A22 CD151 PIDD1 CHID1 RASSF7
esv3625088 Chr.11:876861 - 979340 on Build GRCh38 Gain AP2A2 CHID1
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss IRF7 TSPAN4 ANO9 POLR2L B4GALNT4 PNPLA2 PTDSS2 LRRC56 MIR210HG SIGIRR CDHR5 LOC171391 MIR6744 LOC143666 MUC6 DRD4 PHRF1 AP2A2 MUC2 LMNTD2 RNH1 CRACR2B PKP3 MIR210 RPLP2 EPS8L2 PANO1 TALDO1 DEAF1 SCT LOC101927503 TMEM80 SNORA52 TOLLIP HRAS PDDC1 MUC5AC LOC101059906 CEND1 SLC25A22 CD151 PIDD1 MUC5B CHID1 RASSF7
dgv175e214 Chr.11:851409 - 1043855 on Build GRCh38 Gain TSPAN4 MUC6 AP2A2 CHID1
esv2669189 Chr.11:864834 - 1489637 on Build GRCh38 Deletion TSPAN4 BRSK2 LOC101927503 TOLLIP MOB2 MUC5AC TOLLIP-AS1 MIR6744 MUC6 AP2A2 MUC2 MUC5B CHID1
nsv832044 Chr.11:809019 - 938308 on Build GRCh38 Loss TSPAN4 CRACR2B RPLP2 POLR2L CD151 PNPLA2 AP2A2 SNORA52 PIDD1 CHID1
nsv1040044 Chr.11:776335 - 900929 on Build GRCh38 Gain+Loss TSPAN4 CRACR2B RPLP2 PANO1 POLR2L PNPLA2 SNORA52 PDDC1 LOC171391 CEND1 SLC25A22 CD151 PIDD1 CHID1
esv32950 Chr.11:877601 - 882764 on Build GRCh38 Gain CHID1
nsv1048774 Chr.11:816471 - 900929 on Build GRCh38 Gain TSPAN4 CRACR2B POLR2L CD151 PNPLA2 CHID1
nsv951272 Chr.11:751201 - 911500 on Build GRCh38 Deletion TSPAN4 CRACR2B RPLP2 PANO1 TALDO1 POLR2L PNPLA2 SNORA52 PDDC1 LOC171391 CEND1 SLC25A22 CD151 PIDD1 CHID1

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