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See other CHID1 CNV Assays ›
Gene Symbol
CHID1
Assay Reference Genome
Location

Chr.11:882703 on build GRCh38
Cytoband
11p15.5
Assay ID Hs03799065_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 66005

Gene Name:

 chitinase domain containing 1

Gene Aliases:

 GL008, SI-CLP, SICLP

Location:

 Chr.11:867859-915058 on Build GRCh38

Assay Gene Location:

 Within Intron 14
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CHID1 NM_001142674.1 NP_001136146.1
NM_001142675.1 NP_001136147.1
NM_001142676.1 NP_001136148.1
NM_001142677.1 NP_001136149.1
NM_023947.3 NP_076436.3
XM_005253072.2 XP_005253129.1
XM_005253073.4 XP_005253130.1
XM_006718282.2 XP_006718345.1
XM_011520299.1 XP_011518601.1
XM_011520300.1 XP_011518602.1
XM_011520301.2 XP_011518603.1
XM_011520302.2 XP_011518604.1
XM_017018166.1 XP_016873655.1
XM_017018167.1 XP_016873656.1
XM_017018168.1 XP_016873657.1
AF212229.1 AAK14915.1
AK027711.1 BAB55316.1
AK075413.1 BAC11603.1
AK124697.1
AK225025.1
AK225398.1
AK297743.1
AK301245.1
AY037151.1 AAK67632.1
BC000001.2 AAH00001.1
BC013642.1 AAH13642.1
BC095409.1 AAH95409.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv428244 Chr.11:882364 - 1061595 on Build GRCh38 Loss CHID1 LOC101927503 AP2A2 MUC6
dgv1013n100 Chr.11:772982 - 933569 on Build GRCh38 Gain PDDC1 CRACR2B LOC171391 PIDD1 SLC25A22 CHID1 RPLP2 AP2A2 CEND1 POLR2L TSPAN4 CD151 SNORA52 PNPLA2 PANO1
esv2759794 Chr.11:409846 - 1336162 on Build GRCh38 Loss EPS8L2 CDHR5 TOLLIP LOC101927503 PDDC1 CRACR2B TALDO1 LMNTD2 RNH1 HRAS MUC5B RPLP2 LOC143666 CEND1 TSPAN4 ANO9 SIGIRR PHRF1 PANO1 IRF7 TOLLIP-AS1 DEAF1 PTDSS2 LOC101059906 LRRC56 SCT MUC6 LOC171391 MIR210 PIDD1 MUC5AC MUC2 SLC25A22 MIR210HG CHID1 TMEM80 AP2A2 POLR2L RASSF7 DRD4 CD151 MIR6744 SNORA52 PNPLA2
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion EPS8L2 CDHR5 PDDC1 B4GALNT4 PKP3 CRACR2B TALDO1 LMNTD2 RNH1 HRAS RPLP2 LOC143666 CEND1 TSPAN4 ANO9 SIGIRR PHRF1 PANO1 IRF7 DEAF1 PTDSS2 LOC101059906 LRRC56 SCT LOC171391 MIR210 PIDD1 SLC25A22 MIR210HG CHID1 TMEM80 AP2A2 POLR2L RASSF7 DRD4 CD151 SNORA52 PNPLA2
esv2743878 Chr.11:864732 - 1489652 on Build GRCh38 Deletion TOLLIP-AS1 TOLLIP LOC101927503 MOB2 BRSK2 MUC6 MUC5AC MUC2 MUC5B CHID1 AP2A2 TSPAN4 MIR6744
nsv1159791 Chr.11:461793 - 909492 on Build GRCh38 Deletion EPS8L2 CDHR5 PDDC1 CRACR2B TALDO1 LMNTD2 RNH1 HRAS RPLP2 LOC143666 CEND1 TSPAN4 PHRF1 PANO1 IRF7 DEAF1 PTDSS2 LOC101059906 LRRC56 SCT LOC171391 MIR210 PIDD1 SLC25A22 MIR210HG CHID1 TMEM80 POLR2L RASSF7 DRD4 CD151 SNORA52 PNPLA2
esv3625088 Chr.11:876861 - 979340 on Build GRCh38 Gain CHID1 AP2A2
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss EPS8L2 CDHR5 TOLLIP LOC101927503 PDDC1 B4GALNT4 PKP3 CRACR2B TALDO1 LMNTD2 RNH1 HRAS MUC5B RPLP2 LOC143666 CEND1 TSPAN4 ANO9 SIGIRR PHRF1 PANO1 IRF7 DEAF1 PTDSS2 LOC101059906 LRRC56 SCT MUC6 LOC171391 MIR210 PIDD1 MUC5AC MUC2 SLC25A22 MIR210HG CHID1 TMEM80 AP2A2 POLR2L RASSF7 DRD4 CD151 MIR6744 SNORA52 PNPLA2
dgv175e214 Chr.11:851409 - 1043855 on Build GRCh38 Gain CHID1 AP2A2 TSPAN4 MUC6
esv2669189 Chr.11:864834 - 1489637 on Build GRCh38 Deletion TOLLIP-AS1 TOLLIP LOC101927503 MOB2 BRSK2 MUC6 MUC5AC MUC2 MUC5B CHID1 AP2A2 TSPAN4 MIR6744
nsv832044 Chr.11:809019 - 938308 on Build GRCh38 Loss CHID1 RPLP2 AP2A2 POLR2L TSPAN4 CRACR2B CD151 SNORA52 PIDD1 PNPLA2
nsv1040044 Chr.11:776335 - 900929 on Build GRCh38 Gain+Loss PDDC1 CRACR2B LOC171391 PIDD1 SLC25A22 CHID1 RPLP2 CEND1 POLR2L TSPAN4 CD151 SNORA52 PNPLA2 PANO1
esv32950 Chr.11:877601 - 882764 on Build GRCh38 Gain CHID1
nsv1048774 Chr.11:816471 - 900929 on Build GRCh38 Gain CHID1 POLR2L TSPAN4 CRACR2B CD151 PNPLA2
nsv951272 Chr.11:751201 - 911500 on Build GRCh38 Deletion PDDC1 CRACR2B TALDO1 LOC171391 PIDD1 SLC25A22 CHID1 RPLP2 CEND1 POLR2L TSPAN4 CD151 SNORA52 PNPLA2 PANO1

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